Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0173:032
Extra
PDB:
ATOM 1 O3' G A 172 65.348 126.413 22.843 1.00 44.53 O
ATOM 2 P G A 173 64.422 127.690 22.550 1.00 48.30 P
ATOM 3 OP1 G A 173 64.451 127.895 21.079 1.00 48.32 O
ATOM 4 OP2 G A 173 64.826 128.799 23.441 1.00 48.57 O
ATOM 5 O5' G A 173 62.964 127.214 22.988 1.00 48.98 O
ATOM 6 C5' G A 173 62.223 126.275 22.184 1.00 49.18 C
ATOM 7 C4' G A 173 61.522 125.259 23.055 1.00 48.43 C
ATOM 8 O4' G A 173 61.957 125.380 24.437 1.00 49.36 O
ATOM 9 C3' G A 173 60.003 125.349 23.084 1.00 48.45 C
ATOM 10 O3' G A 173 59.496 124.045 23.294 1.00 52.38 O
ATOM 11 C2' G A 173 59.752 126.138 24.364 1.00 48.53 C
ATOM 12 O2' G A 173 58.485 125.911 24.946 1.00 46.38 O
ATOM 13 C1' G A 173 60.831 125.556 25.268 1.00 48.96 C
ATOM 14 N9 G A 173 61.197 126.406 26.397 1.00 49.89 N
ATOM 15 C8 G A 173 61.808 127.634 26.351 1.00 50.29 C
ATOM 16 N7 G A 173 61.991 128.158 27.532 1.00 50.69 N
ATOM 17 C5 G A 173 61.474 127.218 28.411 1.00 49.26 C
ATOM 18 C6 G A 173 61.392 127.235 29.818 1.00 48.47 C
ATOM 19 O6 G A 173 61.766 128.112 30.599 1.00 47.69 O
ATOM 20 N1 G A 173 60.798 126.080 30.308 1.00 49.05 N
ATOM 21 C2 G A 173 60.337 125.041 29.541 1.00 49.10 C
ATOM 22 N2 G A 173 59.783 124.015 30.204 1.00 48.44 N
ATOM 23 N3 G A 173 60.409 125.012 28.224 1.00 49.04 N
ATOM 24 C4 G A 173 60.985 126.127 27.728 1.00 49.36 C
ATOM 25 P A A 174 59.368 123.013 22.068 1.00 54.40 P
ATOM 26 OP1 A A 174 60.688 122.925 21.397 1.00 53.86 O
ATOM 27 OP2 A A 174 58.159 123.326 21.269 1.00 54.03 O
ATOM 28 O5' A A 174 59.116 121.637 22.830 1.00 53.00 O
TER
ATOM 1 O3' G B 31 58.534 130.302 23.977 1.00 45.29 O
ATOM 2 P C B 32 59.334 129.685 22.722 1.00 45.77 P
ATOM 3 OP1 C B 32 59.278 130.745 21.680 1.00 45.73 O
ATOM 4 OP2 C B 32 58.837 128.319 22.409 1.00 46.35 O
ATOM 5 O5' C B 32 60.840 129.557 23.236 1.00 43.45 O
ATOM 6 C5' C B 32 61.744 130.687 23.183 1.00 42.21 C
ATOM 7 C4' C B 32 61.569 131.558 24.406 1.00 40.39 C
ATOM 8 O4' C B 32 61.909 130.800 25.593 1.00 39.64 O
ATOM 9 C3' C B 32 62.456 132.785 24.501 1.00 40.84 C
ATOM 10 O3' C B 32 61.915 133.867 23.745 1.00 43.88 O
ATOM 11 C2' C B 32 62.405 133.083 25.989 1.00 39.57 C
ATOM 12 O2' C B 32 61.195 133.716 26.335 1.00 40.32 O
ATOM 13 C1' C B 32 62.414 131.673 26.585 1.00 38.24 C
ATOM 14 N1 C B 32 63.754 131.212 26.996 1.00 36.77 N
ATOM 15 C2 C B 32 64.323 131.748 28.156 1.00 37.67 C
ATOM 16 O2 C B 32 63.654 132.534 28.847 1.00 38.97 O
ATOM 17 N3 C B 32 65.586 131.394 28.498 1.00 36.32 N
ATOM 18 C4 C B 32 66.265 130.535 27.740 1.00 36.00 C
ATOM 19 N4 C B 32 67.516 130.253 28.084 1.00 36.22 N
ATOM 20 C5 C B 32 65.693 129.938 26.586 1.00 36.78 C
ATOM 21 C6 C B 32 64.447 130.300 26.253 1.00 37.42 C
ATOM 22 P U B 33 62.898 134.971 23.097 1.00 46.04 P
ATOM 23 OP1 U B 33 62.058 135.824 22.207 1.00 42.31 O
ATOM 24 OP2 U B 33 64.105 134.289 22.541 1.00 44.20 O
ATOM 25 O5' U B 33 63.343 135.857 24.340 1.00 43.17 O
TER
ATOM 2 P G A 173 64.422 127.690 22.550 1.00 48.30 P
ATOM 3 OP1 G A 173 64.451 127.895 21.079 1.00 48.32 O
ATOM 4 OP2 G A 173 64.826 128.799 23.441 1.00 48.57 O
ATOM 5 O5' G A 173 62.964 127.214 22.988 1.00 48.98 O
ATOM 6 C5' G A 173 62.223 126.275 22.184 1.00 49.18 C
ATOM 7 C4' G A 173 61.522 125.259 23.055 1.00 48.43 C
ATOM 8 O4' G A 173 61.957 125.380 24.437 1.00 49.36 O
ATOM 9 C3' G A 173 60.003 125.349 23.084 1.00 48.45 C
ATOM 10 O3' G A 173 59.496 124.045 23.294 1.00 52.38 O
ATOM 11 C2' G A 173 59.752 126.138 24.364 1.00 48.53 C
ATOM 12 O2' G A 173 58.485 125.911 24.946 1.00 46.38 O
ATOM 13 C1' G A 173 60.831 125.556 25.268 1.00 48.96 C
ATOM 14 N9 G A 173 61.197 126.406 26.397 1.00 49.89 N
ATOM 15 C8 G A 173 61.808 127.634 26.351 1.00 50.29 C
ATOM 16 N7 G A 173 61.991 128.158 27.532 1.00 50.69 N
ATOM 17 C5 G A 173 61.474 127.218 28.411 1.00 49.26 C
ATOM 18 C6 G A 173 61.392 127.235 29.818 1.00 48.47 C
ATOM 19 O6 G A 173 61.766 128.112 30.599 1.00 47.69 O
ATOM 20 N1 G A 173 60.798 126.080 30.308 1.00 49.05 N
ATOM 21 C2 G A 173 60.337 125.041 29.541 1.00 49.10 C
ATOM 22 N2 G A 173 59.783 124.015 30.204 1.00 48.44 N
ATOM 23 N3 G A 173 60.409 125.012 28.224 1.00 49.04 N
ATOM 24 C4 G A 173 60.985 126.127 27.728 1.00 49.36 C
ATOM 25 P A A 174 59.368 123.013 22.068 1.00 54.40 P
ATOM 26 OP1 A A 174 60.688 122.925 21.397 1.00 53.86 O
ATOM 27 OP2 A A 174 58.159 123.326 21.269 1.00 54.03 O
ATOM 28 O5' A A 174 59.116 121.637 22.830 1.00 53.00 O
TER
ATOM 1 O3' G B 31 58.534 130.302 23.977 1.00 45.29 O
ATOM 2 P C B 32 59.334 129.685 22.722 1.00 45.77 P
ATOM 3 OP1 C B 32 59.278 130.745 21.680 1.00 45.73 O
ATOM 4 OP2 C B 32 58.837 128.319 22.409 1.00 46.35 O
ATOM 5 O5' C B 32 60.840 129.557 23.236 1.00 43.45 O
ATOM 6 C5' C B 32 61.744 130.687 23.183 1.00 42.21 C
ATOM 7 C4' C B 32 61.569 131.558 24.406 1.00 40.39 C
ATOM 8 O4' C B 32 61.909 130.800 25.593 1.00 39.64 O
ATOM 9 C3' C B 32 62.456 132.785 24.501 1.00 40.84 C
ATOM 10 O3' C B 32 61.915 133.867 23.745 1.00 43.88 O
ATOM 11 C2' C B 32 62.405 133.083 25.989 1.00 39.57 C
ATOM 12 O2' C B 32 61.195 133.716 26.335 1.00 40.32 O
ATOM 13 C1' C B 32 62.414 131.673 26.585 1.00 38.24 C
ATOM 14 N1 C B 32 63.754 131.212 26.996 1.00 36.77 N
ATOM 15 C2 C B 32 64.323 131.748 28.156 1.00 37.67 C
ATOM 16 O2 C B 32 63.654 132.534 28.847 1.00 38.97 O
ATOM 17 N3 C B 32 65.586 131.394 28.498 1.00 36.32 N
ATOM 18 C4 C B 32 66.265 130.535 27.740 1.00 36.00 C
ATOM 19 N4 C B 32 67.516 130.253 28.084 1.00 36.22 N
ATOM 20 C5 C B 32 65.693 129.938 26.586 1.00 36.78 C
ATOM 21 C6 C B 32 64.447 130.300 26.253 1.00 37.42 C
ATOM 22 P U B 33 62.898 134.971 23.097 1.00 46.04 P
ATOM 23 OP1 U B 33 62.058 135.824 22.207 1.00 42.31 O
ATOM 24 OP2 U B 33 64.105 134.289 22.541 1.00 44.20 O
ATOM 25 O5' U B 33 63.343 135.857 24.340 1.00 43.17 O
TER
Atoms:
OP1: (64.451,127.895,21.079)
OP2: (64.826,128.799,23.441)
C3': (60.003,125.349,23.084)
C1': (60.831,125.556,25.268)
C5': (62.223,126.275,22.184)
O6: (61.766,128.112,30.599)
O4': (61.957,125.380,24.437)
C8: (61.808,127.634,26.351)
C2: (60.337,125.041,29.541)
C6: (61.392,127.235,29.818)
C5: (61.474,127.218,28.411)
C4: (60.985,126.127,27.728)
P: (64.422,127.690,22.550)
C4': (61.522,125.259,23.055)
C2': (59.752,126.138,24.364)
O2': (58.485,125.911,24.946)
N1: (60.798,126.080,30.308)
N2: (59.783,124.015,30.204)
N3: (60.409,125.012,28.224)
N7: (61.991,128.158,27.532)
N9: (61.197,126.406,26.397)
O5': (62.964,127.214,22.988)
O3': (59.496,124.045,23.294)
OP2: (64.826,128.799,23.441)
C3': (60.003,125.349,23.084)
C1': (60.831,125.556,25.268)
C5': (62.223,126.275,22.184)
O6: (61.766,128.112,30.599)
O4': (61.957,125.380,24.437)
C8: (61.808,127.634,26.351)
C2: (60.337,125.041,29.541)
C6: (61.392,127.235,29.818)
C5: (61.474,127.218,28.411)
C4: (60.985,126.127,27.728)
P: (64.422,127.690,22.550)
C4': (61.522,125.259,23.055)
C2': (59.752,126.138,24.364)
O2': (58.485,125.911,24.946)
N1: (60.798,126.080,30.308)
N2: (59.783,124.015,30.204)
N3: (60.409,125.012,28.224)
N7: (61.991,128.158,27.532)
N9: (61.197,126.406,26.397)
O5': (62.964,127.214,22.988)
O3': (59.496,124.045,23.294)
C2: (64.323,131.748,28.156)
OP1: (59.278,130.745,21.680)
OP2: (58.837,128.319,22.409)
C4: (66.265,130.535,27.740)
O5': (60.840,129.557,23.236)
C3': (62.456,132.785,24.501)
C1': (62.414,131.673,26.585)
O4': (61.909,130.800,25.593)
C5': (61.744,130.687,23.183)
P: (59.334,129.685,22.722)
O2: (63.654,132.534,28.847)
C4': (61.569,131.558,24.406)
C2': (62.405,133.083,25.989)
O2': (61.195,133.716,26.335)
N1: (63.754,131.212,26.996)
N3: (65.586,131.394,28.498)
N4: (67.516,130.253,28.084)
C6: (64.447,130.300,26.253)
C5: (65.693,129.938,26.586)
O3': (61.915,133.867,23.745)
OP1: (59.278,130.745,21.680)
OP2: (58.837,128.319,22.409)
C4: (66.265,130.535,27.740)
O5': (60.840,129.557,23.236)
C3': (62.456,132.785,24.501)
C1': (62.414,131.673,26.585)
O4': (61.909,130.800,25.593)
C5': (61.744,130.687,23.183)
P: (59.334,129.685,22.722)
O2: (63.654,132.534,28.847)
C4': (61.569,131.558,24.406)
C2': (62.405,133.083,25.989)
O2': (61.195,133.716,26.335)
N1: (63.754,131.212,26.996)
N3: (65.586,131.394,28.498)
N4: (67.516,130.253,28.084)
C6: (64.447,130.300,26.253)
C5: (65.693,129.938,26.586)
O3': (61.915,133.867,23.745)
Image (generated by PyMOL):