Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01108:01109
Extra
PDB:
ATOM 1 O3' C A1107 35.641 75.694 172.203 1.00 81.43 O
ATOM 2 P U A1108 34.701 74.493 172.714 1.00 81.24 P
ATOM 3 OP1 U A1108 35.587 73.508 173.377 1.00 80.52 O
ATOM 4 OP2 U A1108 33.836 74.055 171.587 1.00 80.76 O
ATOM 5 O5' U A1108 33.786 75.168 173.833 1.00 80.73 O
ATOM 6 C5' U A1108 33.208 76.477 173.637 1.00 81.14 C
ATOM 7 C4' U A1108 32.219 76.777 174.739 1.00 81.68 C
ATOM 8 O4' U A1108 31.788 78.169 174.665 1.00 82.14 O
ATOM 9 C3' U A1108 30.944 75.940 174.710 1.00 82.45 C
ATOM 10 O3' U A1108 30.493 75.732 176.042 1.00 83.71 O
ATOM 11 C2' U A1108 29.961 76.871 174.013 1.00 83.02 C
ATOM 12 O2' U A1108 28.607 76.591 174.310 1.00 84.87 O
ATOM 13 C1' U A1108 30.376 78.215 174.607 1.00 82.83 C
ATOM 14 N1 U A1108 29.943 79.388 173.830 1.00 82.96 N
ATOM 15 C2 U A1108 28.798 80.049 174.259 1.00 83.31 C
ATOM 16 O2 U A1108 28.154 79.707 175.237 1.00 84.65 O
ATOM 17 N3 U A1108 28.430 81.126 173.495 1.00 83.51 N
ATOM 18 C4 U A1108 29.064 81.600 172.369 1.00 84.06 C
ATOM 19 O4 U A1108 28.596 82.580 171.780 1.00 85.20 O
ATOM 20 C5 U A1108 30.234 80.866 171.988 1.00 83.22 C
ATOM 21 C6 U A1108 30.627 79.816 172.715 1.00 82.75 C
ATOM 22 P A A1109 30.456 74.249 176.653 1.00 85.21 P
ATOM 23 OP1 A A1109 30.105 73.284 175.573 1.00 84.99 O
ATOM 24 OP2 A A1109 29.617 74.318 177.880 1.00 85.28 O
ATOM 25 O5' A A1109 31.961 73.984 177.103 1.00 83.84 O
TER
ATOM 1 O3' U B1108 30.493 75.732 176.042 1.00 83.71 O
ATOM 2 P A B1109 30.456 74.249 176.653 1.00 85.21 P
ATOM 3 OP1 A B1109 30.105 73.284 175.573 1.00 84.99 O
ATOM 4 OP2 A B1109 29.617 74.318 177.880 1.00 85.28 O
ATOM 5 O5' A B1109 31.961 73.984 177.103 1.00 83.84 O
ATOM 6 C5' A B1109 32.552 74.752 178.163 1.00 82.07 C
ATOM 7 C4' A B1109 33.933 74.235 178.470 1.00 82.21 C
ATOM 8 O4' A B1109 33.829 72.842 178.864 1.00 83.76 O
ATOM 9 C3' A B1109 34.940 74.268 177.323 1.00 82.06 C
ATOM 10 O3' A B1109 36.246 74.448 177.871 1.00 79.87 O
ATOM 11 C2' A B1109 34.835 72.856 176.765 1.00 83.77 C
ATOM 12 O2' A B1109 35.992 72.422 176.081 1.00 86.49 O
ATOM 13 C1' A B1109 34.678 72.064 178.055 1.00 85.55 C
ATOM 14 N9 A B1109 34.104 70.729 177.908 1.00 88.77 N
ATOM 15 C8 A B1109 32.954 70.340 177.261 1.00 89.80 C
ATOM 16 N7 A B1109 32.736 69.048 177.308 1.00 90.63 N
ATOM 17 C5 A B1109 33.813 68.553 178.034 1.00 90.46 C
ATOM 18 C6 A B1109 34.177 67.254 178.423 1.00 90.61 C
ATOM 19 N6 A B1109 33.476 66.162 178.106 1.00 91.39 N
ATOM 20 N1 A B1109 35.305 67.109 179.150 1.00 90.93 N
ATOM 21 C2 A B1109 36.019 68.198 179.449 1.00 90.15 C
ATOM 22 N3 A B1109 35.790 69.466 179.133 1.00 90.20 N
ATOM 23 C4 A B1109 34.657 69.578 178.416 1.00 89.92 C
ATOM 24 P G B1110 36.913 75.910 177.900 1.00 78.23 P
ATOM 25 OP1 G B1110 38.310 75.771 177.442 1.00 78.39 O
ATOM 26 OP2 G B1110 36.636 76.532 179.214 1.00 78.83 O
ATOM 27 O5' G B1110 36.093 76.744 176.824 1.00 78.54 O
TER
ATOM 2 P U A1108 34.701 74.493 172.714 1.00 81.24 P
ATOM 3 OP1 U A1108 35.587 73.508 173.377 1.00 80.52 O
ATOM 4 OP2 U A1108 33.836 74.055 171.587 1.00 80.76 O
ATOM 5 O5' U A1108 33.786 75.168 173.833 1.00 80.73 O
ATOM 6 C5' U A1108 33.208 76.477 173.637 1.00 81.14 C
ATOM 7 C4' U A1108 32.219 76.777 174.739 1.00 81.68 C
ATOM 8 O4' U A1108 31.788 78.169 174.665 1.00 82.14 O
ATOM 9 C3' U A1108 30.944 75.940 174.710 1.00 82.45 C
ATOM 10 O3' U A1108 30.493 75.732 176.042 1.00 83.71 O
ATOM 11 C2' U A1108 29.961 76.871 174.013 1.00 83.02 C
ATOM 12 O2' U A1108 28.607 76.591 174.310 1.00 84.87 O
ATOM 13 C1' U A1108 30.376 78.215 174.607 1.00 82.83 C
ATOM 14 N1 U A1108 29.943 79.388 173.830 1.00 82.96 N
ATOM 15 C2 U A1108 28.798 80.049 174.259 1.00 83.31 C
ATOM 16 O2 U A1108 28.154 79.707 175.237 1.00 84.65 O
ATOM 17 N3 U A1108 28.430 81.126 173.495 1.00 83.51 N
ATOM 18 C4 U A1108 29.064 81.600 172.369 1.00 84.06 C
ATOM 19 O4 U A1108 28.596 82.580 171.780 1.00 85.20 O
ATOM 20 C5 U A1108 30.234 80.866 171.988 1.00 83.22 C
ATOM 21 C6 U A1108 30.627 79.816 172.715 1.00 82.75 C
ATOM 22 P A A1109 30.456 74.249 176.653 1.00 85.21 P
ATOM 23 OP1 A A1109 30.105 73.284 175.573 1.00 84.99 O
ATOM 24 OP2 A A1109 29.617 74.318 177.880 1.00 85.28 O
ATOM 25 O5' A A1109 31.961 73.984 177.103 1.00 83.84 O
TER
ATOM 1 O3' U B1108 30.493 75.732 176.042 1.00 83.71 O
ATOM 2 P A B1109 30.456 74.249 176.653 1.00 85.21 P
ATOM 3 OP1 A B1109 30.105 73.284 175.573 1.00 84.99 O
ATOM 4 OP2 A B1109 29.617 74.318 177.880 1.00 85.28 O
ATOM 5 O5' A B1109 31.961 73.984 177.103 1.00 83.84 O
ATOM 6 C5' A B1109 32.552 74.752 178.163 1.00 82.07 C
ATOM 7 C4' A B1109 33.933 74.235 178.470 1.00 82.21 C
ATOM 8 O4' A B1109 33.829 72.842 178.864 1.00 83.76 O
ATOM 9 C3' A B1109 34.940 74.268 177.323 1.00 82.06 C
ATOM 10 O3' A B1109 36.246 74.448 177.871 1.00 79.87 O
ATOM 11 C2' A B1109 34.835 72.856 176.765 1.00 83.77 C
ATOM 12 O2' A B1109 35.992 72.422 176.081 1.00 86.49 O
ATOM 13 C1' A B1109 34.678 72.064 178.055 1.00 85.55 C
ATOM 14 N9 A B1109 34.104 70.729 177.908 1.00 88.77 N
ATOM 15 C8 A B1109 32.954 70.340 177.261 1.00 89.80 C
ATOM 16 N7 A B1109 32.736 69.048 177.308 1.00 90.63 N
ATOM 17 C5 A B1109 33.813 68.553 178.034 1.00 90.46 C
ATOM 18 C6 A B1109 34.177 67.254 178.423 1.00 90.61 C
ATOM 19 N6 A B1109 33.476 66.162 178.106 1.00 91.39 N
ATOM 20 N1 A B1109 35.305 67.109 179.150 1.00 90.93 N
ATOM 21 C2 A B1109 36.019 68.198 179.449 1.00 90.15 C
ATOM 22 N3 A B1109 35.790 69.466 179.133 1.00 90.20 N
ATOM 23 C4 A B1109 34.657 69.578 178.416 1.00 89.92 C
ATOM 24 P G B1110 36.913 75.910 177.900 1.00 78.23 P
ATOM 25 OP1 G B1110 38.310 75.771 177.442 1.00 78.39 O
ATOM 26 OP2 G B1110 36.636 76.532 179.214 1.00 78.83 O
ATOM 27 O5' G B1110 36.093 76.744 176.824 1.00 78.54 O
TER
Atoms:
C4: (29.064,81.600,172.369)
N3: (28.430,81.126,173.495)
OP1: (35.587,73.508,173.377)
OP2: (33.836,74.055,171.587)
C2: (28.798,80.049,174.259)
C1': (30.376,78.215,174.607)
C3': (30.944,75.940,174.710)
O5': (33.786,75.168,173.833)
O4': (31.788,78.169,174.665)
C5': (33.208,76.477,173.637)
P: (34.701,74.493,172.714)
C4': (32.219,76.777,174.739)
C2': (29.961,76.871,174.013)
O2': (28.607,76.591,174.310)
N1: (29.943,79.388,173.830)
O4: (28.596,82.580,171.780)
O2: (28.154,79.707,175.237)
C6: (30.627,79.816,172.715)
C5: (30.234,80.866,171.988)
O3': (30.493,75.732,176.042)
N3: (28.430,81.126,173.495)
OP1: (35.587,73.508,173.377)
OP2: (33.836,74.055,171.587)
C2: (28.798,80.049,174.259)
C1': (30.376,78.215,174.607)
C3': (30.944,75.940,174.710)
O5': (33.786,75.168,173.833)
O4': (31.788,78.169,174.665)
C5': (33.208,76.477,173.637)
P: (34.701,74.493,172.714)
C4': (32.219,76.777,174.739)
C2': (29.961,76.871,174.013)
O2': (28.607,76.591,174.310)
N1: (29.943,79.388,173.830)
O4: (28.596,82.580,171.780)
O2: (28.154,79.707,175.237)
C6: (30.627,79.816,172.715)
C5: (30.234,80.866,171.988)
O3': (30.493,75.732,176.042)
OP1: (30.105,73.284,175.573)
OP2: (29.617,74.318,177.880)
C3': (34.940,74.268,177.323)
C1': (34.678,72.064,178.055)
C5': (32.552,74.752,178.163)
O4': (33.829,72.842,178.864)
C8: (32.954,70.340,177.261)
O2': (35.992,72.422,176.081)
C6: (34.177,67.254,178.423)
C5: (33.813,68.553,178.034)
C4: (34.657,69.578,178.416)
P: (30.456,74.249,176.653)
C4': (33.933,74.235,178.470)
C2': (34.835,72.856,176.765)
C2: (36.019,68.198,179.449)
N1: (35.305,67.109,179.150)
N3: (35.790,69.466,179.133)
N6: (33.476,66.162,178.106)
N7: (32.736,69.048,177.308)
N9: (34.104,70.729,177.908)
O5': (31.961,73.984,177.103)
O3': (36.246,74.448,177.871)
OP2: (29.617,74.318,177.880)
C3': (34.940,74.268,177.323)
C1': (34.678,72.064,178.055)
C5': (32.552,74.752,178.163)
O4': (33.829,72.842,178.864)
C8: (32.954,70.340,177.261)
O2': (35.992,72.422,176.081)
C6: (34.177,67.254,178.423)
C5: (33.813,68.553,178.034)
C4: (34.657,69.578,178.416)
P: (30.456,74.249,176.653)
C4': (33.933,74.235,178.470)
C2': (34.835,72.856,176.765)
C2: (36.019,68.198,179.449)
N1: (35.305,67.109,179.150)
N3: (35.790,69.466,179.133)
N6: (33.476,66.162,178.106)
N7: (32.736,69.048,177.308)
N9: (34.104,70.729,177.908)
O5': (31.961,73.984,177.103)
O3': (36.246,74.448,177.871)
Image (generated by PyMOL):