Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01434:01824
Extra
PDB:
ATOM 1 O3' C A1433 87.286 132.986 48.486 1.00 45.87 O
ATOM 2 P G A1434 88.657 133.828 48.709 1.00 45.85 P
ATOM 3 OP1 G A1434 88.741 134.155 50.153 1.00 43.81 O
ATOM 4 OP2 G A1434 88.731 134.921 47.711 1.00 43.58 O
ATOM 5 O5' G A1434 89.837 132.803 48.383 1.00 46.90 O
ATOM 6 C5' G A1434 90.362 131.920 49.397 1.00 47.16 C
ATOM 7 C4' G A1434 91.601 131.215 48.897 1.00 48.99 C
ATOM 8 O4' G A1434 91.274 130.460 47.698 1.00 49.95 O
ATOM 9 C3' G A1434 92.748 132.093 48.427 1.00 51.21 C
ATOM 10 O3' G A1434 93.523 132.626 49.483 1.00 55.21 O
ATOM 11 C2' G A1434 93.544 131.123 47.570 1.00 50.44 C
ATOM 12 O2' G A1434 94.273 130.188 48.344 1.00 50.12 O
ATOM 13 C1' G A1434 92.413 130.403 46.842 1.00 48.77 C
ATOM 14 N9 G A1434 92.094 131.062 45.577 1.00 46.59 N
ATOM 15 C8 G A1434 91.063 131.932 45.317 1.00 47.75 C
ATOM 16 N7 G A1434 91.056 132.364 44.084 1.00 46.83 N
ATOM 17 C5 G A1434 92.146 131.741 43.497 1.00 46.29 C
ATOM 18 C6 G A1434 92.655 131.823 42.174 1.00 47.16 C
ATOM 19 O6 G A1434 92.239 132.501 41.224 1.00 48.85 O
ATOM 20 N1 G A1434 93.771 131.015 42.006 1.00 46.11 N
ATOM 21 C2 G A1434 94.336 130.245 42.983 1.00 46.55 C
ATOM 22 N2 G A1434 95.410 129.536 42.633 1.00 48.41 N
ATOM 23 N3 G A1434 93.883 130.170 44.219 1.00 47.72 N
ATOM 24 C4 G A1434 92.793 130.933 44.404 1.00 46.38 C
ATOM 25 P A A1435 93.862 134.199 49.497 1.00 58.99 P
ATOM 26 OP1 A A1435 93.559 134.661 50.871 1.00 59.95 O
ATOM 27 OP2 A A1435 93.213 134.882 48.335 1.00 59.01 O
ATOM 28 O5' A A1435 95.443 134.258 49.316 1.00 59.16 O
TER
ATOM 1 O3' A B1823 99.888 121.917 44.694 1.00 46.65 O
ATOM 2 P A B1824 101.276 122.686 44.934 1.00 47.32 P
ATOM 3 OP1 A B1824 102.347 121.896 44.264 1.00 46.79 O
ATOM 4 OP2 A B1824 101.391 122.979 46.377 1.00 46.85 O
ATOM 5 O5' A B1824 101.076 124.060 44.156 1.00 46.02 O
ATOM 6 C5' A B1824 100.738 124.080 42.753 1.00 46.38 C
ATOM 7 C4' A B1824 100.223 125.442 42.364 1.00 46.99 C
ATOM 8 O4' A B1824 98.937 125.662 42.997 1.00 48.03 O
ATOM 9 C3' A B1824 101.076 126.593 42.869 1.00 48.09 C
ATOM 10 O3' A B1824 102.202 126.854 42.057 1.00 50.40 O
ATOM 11 C2' A B1824 100.087 127.744 42.929 1.00 47.84 C
ATOM 12 O2' A B1824 99.841 128.352 41.673 1.00 46.42 O
ATOM 13 C1' A B1824 98.841 127.013 43.428 1.00 47.59 C
ATOM 14 N9 A B1824 98.761 127.014 44.886 1.00 45.84 N
ATOM 15 C8 A B1824 99.473 126.251 45.782 1.00 47.52 C
ATOM 16 N7 A B1824 99.173 126.491 47.035 1.00 45.78 N
ATOM 17 C5 A B1824 98.201 127.476 46.957 1.00 44.11 C
ATOM 18 C6 A B1824 97.480 128.155 47.933 1.00 43.69 C
ATOM 19 N6 A B1824 97.627 127.940 49.237 1.00 44.56 N
ATOM 20 N1 A B1824 96.586 129.078 47.525 1.00 43.64 N
ATOM 21 C2 A B1824 96.438 129.293 46.215 1.00 43.52 C
ATOM 22 N3 A B1824 97.059 128.718 45.196 1.00 43.86 N
ATOM 23 C4 A B1824 97.939 127.807 45.641 1.00 45.09 C
ATOM 24 P G B1825 103.561 127.349 42.746 1.00 53.37 P
ATOM 25 OP1 G B1825 104.445 127.826 41.652 1.00 54.64 O
ATOM 26 OP2 G B1825 104.037 126.285 43.677 1.00 53.94 O
ATOM 27 O5' G B1825 103.090 128.608 43.597 1.00 52.62 O
TER
ATOM 2 P G A1434 88.657 133.828 48.709 1.00 45.85 P
ATOM 3 OP1 G A1434 88.741 134.155 50.153 1.00 43.81 O
ATOM 4 OP2 G A1434 88.731 134.921 47.711 1.00 43.58 O
ATOM 5 O5' G A1434 89.837 132.803 48.383 1.00 46.90 O
ATOM 6 C5' G A1434 90.362 131.920 49.397 1.00 47.16 C
ATOM 7 C4' G A1434 91.601 131.215 48.897 1.00 48.99 C
ATOM 8 O4' G A1434 91.274 130.460 47.698 1.00 49.95 O
ATOM 9 C3' G A1434 92.748 132.093 48.427 1.00 51.21 C
ATOM 10 O3' G A1434 93.523 132.626 49.483 1.00 55.21 O
ATOM 11 C2' G A1434 93.544 131.123 47.570 1.00 50.44 C
ATOM 12 O2' G A1434 94.273 130.188 48.344 1.00 50.12 O
ATOM 13 C1' G A1434 92.413 130.403 46.842 1.00 48.77 C
ATOM 14 N9 G A1434 92.094 131.062 45.577 1.00 46.59 N
ATOM 15 C8 G A1434 91.063 131.932 45.317 1.00 47.75 C
ATOM 16 N7 G A1434 91.056 132.364 44.084 1.00 46.83 N
ATOM 17 C5 G A1434 92.146 131.741 43.497 1.00 46.29 C
ATOM 18 C6 G A1434 92.655 131.823 42.174 1.00 47.16 C
ATOM 19 O6 G A1434 92.239 132.501 41.224 1.00 48.85 O
ATOM 20 N1 G A1434 93.771 131.015 42.006 1.00 46.11 N
ATOM 21 C2 G A1434 94.336 130.245 42.983 1.00 46.55 C
ATOM 22 N2 G A1434 95.410 129.536 42.633 1.00 48.41 N
ATOM 23 N3 G A1434 93.883 130.170 44.219 1.00 47.72 N
ATOM 24 C4 G A1434 92.793 130.933 44.404 1.00 46.38 C
ATOM 25 P A A1435 93.862 134.199 49.497 1.00 58.99 P
ATOM 26 OP1 A A1435 93.559 134.661 50.871 1.00 59.95 O
ATOM 27 OP2 A A1435 93.213 134.882 48.335 1.00 59.01 O
ATOM 28 O5' A A1435 95.443 134.258 49.316 1.00 59.16 O
TER
ATOM 1 O3' A B1823 99.888 121.917 44.694 1.00 46.65 O
ATOM 2 P A B1824 101.276 122.686 44.934 1.00 47.32 P
ATOM 3 OP1 A B1824 102.347 121.896 44.264 1.00 46.79 O
ATOM 4 OP2 A B1824 101.391 122.979 46.377 1.00 46.85 O
ATOM 5 O5' A B1824 101.076 124.060 44.156 1.00 46.02 O
ATOM 6 C5' A B1824 100.738 124.080 42.753 1.00 46.38 C
ATOM 7 C4' A B1824 100.223 125.442 42.364 1.00 46.99 C
ATOM 8 O4' A B1824 98.937 125.662 42.997 1.00 48.03 O
ATOM 9 C3' A B1824 101.076 126.593 42.869 1.00 48.09 C
ATOM 10 O3' A B1824 102.202 126.854 42.057 1.00 50.40 O
ATOM 11 C2' A B1824 100.087 127.744 42.929 1.00 47.84 C
ATOM 12 O2' A B1824 99.841 128.352 41.673 1.00 46.42 O
ATOM 13 C1' A B1824 98.841 127.013 43.428 1.00 47.59 C
ATOM 14 N9 A B1824 98.761 127.014 44.886 1.00 45.84 N
ATOM 15 C8 A B1824 99.473 126.251 45.782 1.00 47.52 C
ATOM 16 N7 A B1824 99.173 126.491 47.035 1.00 45.78 N
ATOM 17 C5 A B1824 98.201 127.476 46.957 1.00 44.11 C
ATOM 18 C6 A B1824 97.480 128.155 47.933 1.00 43.69 C
ATOM 19 N6 A B1824 97.627 127.940 49.237 1.00 44.56 N
ATOM 20 N1 A B1824 96.586 129.078 47.525 1.00 43.64 N
ATOM 21 C2 A B1824 96.438 129.293 46.215 1.00 43.52 C
ATOM 22 N3 A B1824 97.059 128.718 45.196 1.00 43.86 N
ATOM 23 C4 A B1824 97.939 127.807 45.641 1.00 45.09 C
ATOM 24 P G B1825 103.561 127.349 42.746 1.00 53.37 P
ATOM 25 OP1 G B1825 104.445 127.826 41.652 1.00 54.64 O
ATOM 26 OP2 G B1825 104.037 126.285 43.677 1.00 53.94 O
ATOM 27 O5' G B1825 103.090 128.608 43.597 1.00 52.62 O
TER
Atoms:
OP1: (88.741,134.155,50.153)
OP2: (88.731,134.921,47.711)
C3': (92.748,132.093,48.427)
C1': (92.413,130.403,46.842)
C5': (90.362,131.920,49.397)
O6: (92.239,132.501,41.224)
O4': (91.274,130.460,47.698)
C8: (91.063,131.932,45.317)
C2: (94.336,130.245,42.983)
C6: (92.655,131.823,42.174)
C5: (92.146,131.741,43.497)
C4: (92.793,130.933,44.404)
P: (88.657,133.828,48.709)
C4': (91.601,131.215,48.897)
C2': (93.544,131.123,47.570)
O2': (94.273,130.188,48.344)
N1: (93.771,131.015,42.006)
N2: (95.410,129.536,42.633)
N3: (93.883,130.170,44.219)
N7: (91.056,132.364,44.084)
N9: (92.094,131.062,45.577)
O5': (89.837,132.803,48.383)
O3': (93.523,132.626,49.483)
OP2: (88.731,134.921,47.711)
C3': (92.748,132.093,48.427)
C1': (92.413,130.403,46.842)
C5': (90.362,131.920,49.397)
O6: (92.239,132.501,41.224)
O4': (91.274,130.460,47.698)
C8: (91.063,131.932,45.317)
C2: (94.336,130.245,42.983)
C6: (92.655,131.823,42.174)
C5: (92.146,131.741,43.497)
C4: (92.793,130.933,44.404)
P: (88.657,133.828,48.709)
C4': (91.601,131.215,48.897)
C2': (93.544,131.123,47.570)
O2': (94.273,130.188,48.344)
N1: (93.771,131.015,42.006)
N2: (95.410,129.536,42.633)
N3: (93.883,130.170,44.219)
N7: (91.056,132.364,44.084)
N9: (92.094,131.062,45.577)
O5': (89.837,132.803,48.383)
O3': (93.523,132.626,49.483)
OP1: (102.347,121.896,44.264)
OP2: (101.391,122.979,46.377)
C3': (101.076,126.593,42.869)
C1': (98.841,127.013,43.428)
C5': (100.738,124.080,42.753)
O4': (98.937,125.662,42.997)
C8: (99.473,126.251,45.782)
O2': (99.841,128.352,41.673)
C6: (97.480,128.155,47.933)
C5: (98.201,127.476,46.957)
C4: (97.939,127.807,45.641)
P: (101.276,122.686,44.934)
C4': (100.223,125.442,42.364)
C2': (100.087,127.744,42.929)
C2: (96.438,129.293,46.215)
N1: (96.586,129.078,47.525)
N3: (97.059,128.718,45.196)
N6: (97.627,127.940,49.237)
N7: (99.173,126.491,47.035)
N9: (98.761,127.014,44.886)
O5': (101.076,124.060,44.156)
O3': (102.202,126.854,42.057)
OP2: (101.391,122.979,46.377)
C3': (101.076,126.593,42.869)
C1': (98.841,127.013,43.428)
C5': (100.738,124.080,42.753)
O4': (98.937,125.662,42.997)
C8: (99.473,126.251,45.782)
O2': (99.841,128.352,41.673)
C6: (97.480,128.155,47.933)
C5: (98.201,127.476,46.957)
C4: (97.939,127.807,45.641)
P: (101.276,122.686,44.934)
C4': (100.223,125.442,42.364)
C2': (100.087,127.744,42.929)
C2: (96.438,129.293,46.215)
N1: (96.586,129.078,47.525)
N3: (97.059,128.718,45.196)
N6: (97.627,127.940,49.237)
N7: (99.173,126.491,47.035)
N9: (98.761,127.014,44.886)
O5': (101.076,124.060,44.156)
O3': (102.202,126.854,42.057)
Image (generated by PyMOL):