Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01067:01061
Extra
PDB:
ATOM 1 O3' A A1066 11.319 104.234 120.726 1.00 41.83 O
ATOM 2 P G A1067 10.718 105.092 121.949 1.00 41.55 P
ATOM 3 OP1 G A1067 9.643 104.240 122.502 1.00 42.42 O
ATOM 4 OP2 G A1067 10.406 106.481 121.525 1.00 41.12 O
ATOM 5 O5' G A1067 11.892 105.137 123.019 1.00 39.59 O
ATOM 6 C5' G A1067 12.577 103.939 123.376 1.00 38.02 C
ATOM 7 C4' G A1067 12.463 103.694 124.858 1.00 37.99 C
ATOM 8 O4' G A1067 12.920 102.352 125.139 1.00 37.19 O
ATOM 9 C3' G A1067 13.296 104.606 125.747 1.00 38.85 C
ATOM 10 O3' G A1067 12.714 104.626 127.044 1.00 40.97 O
ATOM 11 C2' G A1067 14.600 103.832 125.841 1.00 38.07 C
ATOM 12 O2' G A1067 15.342 104.184 126.984 1.00 39.29 O
ATOM 13 C1' G A1067 14.067 102.406 125.949 1.00 36.77 C
ATOM 14 N9 G A1067 14.949 101.328 125.527 1.00 36.17 N
ATOM 15 C8 G A1067 16.282 101.396 125.212 1.00 36.55 C
ATOM 16 N7 G A1067 16.801 100.227 124.941 1.00 39.34 N
ATOM 17 C5 G A1067 15.742 99.338 125.076 1.00 37.68 C
ATOM 18 C6 G A1067 15.699 97.916 124.955 1.00 37.54 C
ATOM 19 O6 G A1067 16.630 97.125 124.725 1.00 36.25 O
ATOM 20 N1 G A1067 14.413 97.429 125.162 1.00 36.90 N
ATOM 21 C2 G A1067 13.319 98.197 125.471 1.00 36.54 C
ATOM 22 N2 G A1067 12.166 97.544 125.629 1.00 37.34 N
ATOM 23 N3 G A1067 13.352 99.508 125.613 1.00 35.94 N
ATOM 24 C4 G A1067 14.586 100.008 125.405 1.00 36.71 C
ATOM 25 P U A1068 11.625 105.741 127.429 1.00 43.80 P
ATOM 26 OP1 U A1068 10.384 105.000 127.746 1.00 44.31 O
ATOM 27 OP2 U A1068 11.586 106.826 126.413 1.00 42.49 O
ATOM 28 O5' U A1068 12.193 106.330 128.793 1.00 46.38 O
TER
ATOM 1 O3' U B1060 18.542 105.271 123.773 1.00 40.37 O
ATOM 2 P C B1061 18.846 104.939 125.314 1.00 41.23 P
ATOM 3 OP1 C B1061 20.232 104.424 125.418 1.00 41.49 O
ATOM 4 OP2 C B1061 17.717 104.091 125.784 1.00 41.40 O
ATOM 5 O5' C B1061 18.798 106.358 126.039 1.00 38.43 O
ATOM 6 C5' C B1061 17.579 106.857 126.627 1.00 38.48 C
ATOM 7 C4' C B1061 17.720 108.324 126.951 1.00 37.68 C
ATOM 8 O4' C B1061 18.819 108.498 127.880 1.00 37.50 O
ATOM 9 C3' C B1061 18.094 109.208 125.774 1.00 38.20 C
ATOM 10 O3' C B1061 16.961 109.594 125.014 1.00 39.32 O
ATOM 11 C2' C B1061 18.772 110.389 126.449 1.00 37.62 C
ATOM 12 O2' C B1061 17.857 111.305 127.008 1.00 38.34 O
ATOM 13 C1' C B1061 19.534 109.684 127.570 1.00 36.06 C
ATOM 14 N1 C B1061 20.905 109.308 127.184 1.00 34.26 N
ATOM 15 C2 C B1061 21.897 110.286 127.187 1.00 33.19 C
ATOM 16 O2 C B1061 21.594 111.446 127.489 1.00 32.38 O
ATOM 17 N3 C B1061 23.162 109.942 126.860 1.00 33.70 N
ATOM 18 C4 C B1061 23.450 108.678 126.543 1.00 33.32 C
ATOM 19 N4 C B1061 24.714 108.376 126.251 1.00 32.52 N
ATOM 20 C5 C B1061 22.454 107.666 126.517 1.00 33.61 C
ATOM 21 C6 C B1061 21.208 108.021 126.838 1.00 34.02 C
ATOM 22 P C B1062 17.159 110.103 123.509 1.00 40.94 P
ATOM 23 OP1 C B1062 15.811 110.302 122.910 1.00 40.16 O
ATOM 24 OP2 C B1062 18.132 109.183 122.853 1.00 40.48 O
ATOM 25 O5' C B1062 17.841 111.531 123.679 1.00 37.68 O
TER
ATOM 2 P G A1067 10.718 105.092 121.949 1.00 41.55 P
ATOM 3 OP1 G A1067 9.643 104.240 122.502 1.00 42.42 O
ATOM 4 OP2 G A1067 10.406 106.481 121.525 1.00 41.12 O
ATOM 5 O5' G A1067 11.892 105.137 123.019 1.00 39.59 O
ATOM 6 C5' G A1067 12.577 103.939 123.376 1.00 38.02 C
ATOM 7 C4' G A1067 12.463 103.694 124.858 1.00 37.99 C
ATOM 8 O4' G A1067 12.920 102.352 125.139 1.00 37.19 O
ATOM 9 C3' G A1067 13.296 104.606 125.747 1.00 38.85 C
ATOM 10 O3' G A1067 12.714 104.626 127.044 1.00 40.97 O
ATOM 11 C2' G A1067 14.600 103.832 125.841 1.00 38.07 C
ATOM 12 O2' G A1067 15.342 104.184 126.984 1.00 39.29 O
ATOM 13 C1' G A1067 14.067 102.406 125.949 1.00 36.77 C
ATOM 14 N9 G A1067 14.949 101.328 125.527 1.00 36.17 N
ATOM 15 C8 G A1067 16.282 101.396 125.212 1.00 36.55 C
ATOM 16 N7 G A1067 16.801 100.227 124.941 1.00 39.34 N
ATOM 17 C5 G A1067 15.742 99.338 125.076 1.00 37.68 C
ATOM 18 C6 G A1067 15.699 97.916 124.955 1.00 37.54 C
ATOM 19 O6 G A1067 16.630 97.125 124.725 1.00 36.25 O
ATOM 20 N1 G A1067 14.413 97.429 125.162 1.00 36.90 N
ATOM 21 C2 G A1067 13.319 98.197 125.471 1.00 36.54 C
ATOM 22 N2 G A1067 12.166 97.544 125.629 1.00 37.34 N
ATOM 23 N3 G A1067 13.352 99.508 125.613 1.00 35.94 N
ATOM 24 C4 G A1067 14.586 100.008 125.405 1.00 36.71 C
ATOM 25 P U A1068 11.625 105.741 127.429 1.00 43.80 P
ATOM 26 OP1 U A1068 10.384 105.000 127.746 1.00 44.31 O
ATOM 27 OP2 U A1068 11.586 106.826 126.413 1.00 42.49 O
ATOM 28 O5' U A1068 12.193 106.330 128.793 1.00 46.38 O
TER
ATOM 1 O3' U B1060 18.542 105.271 123.773 1.00 40.37 O
ATOM 2 P C B1061 18.846 104.939 125.314 1.00 41.23 P
ATOM 3 OP1 C B1061 20.232 104.424 125.418 1.00 41.49 O
ATOM 4 OP2 C B1061 17.717 104.091 125.784 1.00 41.40 O
ATOM 5 O5' C B1061 18.798 106.358 126.039 1.00 38.43 O
ATOM 6 C5' C B1061 17.579 106.857 126.627 1.00 38.48 C
ATOM 7 C4' C B1061 17.720 108.324 126.951 1.00 37.68 C
ATOM 8 O4' C B1061 18.819 108.498 127.880 1.00 37.50 O
ATOM 9 C3' C B1061 18.094 109.208 125.774 1.00 38.20 C
ATOM 10 O3' C B1061 16.961 109.594 125.014 1.00 39.32 O
ATOM 11 C2' C B1061 18.772 110.389 126.449 1.00 37.62 C
ATOM 12 O2' C B1061 17.857 111.305 127.008 1.00 38.34 O
ATOM 13 C1' C B1061 19.534 109.684 127.570 1.00 36.06 C
ATOM 14 N1 C B1061 20.905 109.308 127.184 1.00 34.26 N
ATOM 15 C2 C B1061 21.897 110.286 127.187 1.00 33.19 C
ATOM 16 O2 C B1061 21.594 111.446 127.489 1.00 32.38 O
ATOM 17 N3 C B1061 23.162 109.942 126.860 1.00 33.70 N
ATOM 18 C4 C B1061 23.450 108.678 126.543 1.00 33.32 C
ATOM 19 N4 C B1061 24.714 108.376 126.251 1.00 32.52 N
ATOM 20 C5 C B1061 22.454 107.666 126.517 1.00 33.61 C
ATOM 21 C6 C B1061 21.208 108.021 126.838 1.00 34.02 C
ATOM 22 P C B1062 17.159 110.103 123.509 1.00 40.94 P
ATOM 23 OP1 C B1062 15.811 110.302 122.910 1.00 40.16 O
ATOM 24 OP2 C B1062 18.132 109.183 122.853 1.00 40.48 O
ATOM 25 O5' C B1062 17.841 111.531 123.679 1.00 37.68 O
TER
Atoms:
OP1: (9.643,104.240,122.502)
OP2: (10.406,106.481,121.525)
C3': (13.296,104.606,125.747)
C1': (14.067,102.406,125.949)
C5': (12.577,103.939,123.376)
O6: (16.630,97.125,124.725)
O4': (12.920,102.352,125.139)
C8: (16.282,101.396,125.212)
C2: (13.319,98.197,125.471)
C6: (15.699,97.916,124.955)
C5: (15.742,99.338,125.076)
C4: (14.586,100.008,125.405)
P: (10.718,105.092,121.949)
C4': (12.463,103.694,124.858)
C2': (14.600,103.832,125.841)
O2': (15.342,104.184,126.984)
N1: (14.413,97.429,125.162)
N2: (12.166,97.544,125.629)
N3: (13.352,99.508,125.613)
N7: (16.801,100.227,124.941)
N9: (14.949,101.328,125.527)
O5': (11.892,105.137,123.019)
O3': (12.714,104.626,127.044)
OP2: (10.406,106.481,121.525)
C3': (13.296,104.606,125.747)
C1': (14.067,102.406,125.949)
C5': (12.577,103.939,123.376)
O6: (16.630,97.125,124.725)
O4': (12.920,102.352,125.139)
C8: (16.282,101.396,125.212)
C2: (13.319,98.197,125.471)
C6: (15.699,97.916,124.955)
C5: (15.742,99.338,125.076)
C4: (14.586,100.008,125.405)
P: (10.718,105.092,121.949)
C4': (12.463,103.694,124.858)
C2': (14.600,103.832,125.841)
O2': (15.342,104.184,126.984)
N1: (14.413,97.429,125.162)
N2: (12.166,97.544,125.629)
N3: (13.352,99.508,125.613)
N7: (16.801,100.227,124.941)
N9: (14.949,101.328,125.527)
O5': (11.892,105.137,123.019)
O3': (12.714,104.626,127.044)
C2: (21.897,110.286,127.187)
OP1: (20.232,104.424,125.418)
OP2: (17.717,104.091,125.784)
C4: (23.450,108.678,126.543)
O5': (18.798,106.358,126.039)
C3': (18.094,109.208,125.774)
C1': (19.534,109.684,127.570)
O4': (18.819,108.498,127.880)
C5': (17.579,106.857,126.627)
P: (18.846,104.939,125.314)
O2: (21.594,111.446,127.489)
C4': (17.720,108.324,126.951)
C2': (18.772,110.389,126.449)
O2': (17.857,111.305,127.008)
N1: (20.905,109.308,127.184)
N3: (23.162,109.942,126.860)
N4: (24.714,108.376,126.251)
C6: (21.208,108.021,126.838)
C5: (22.454,107.666,126.517)
O3': (16.961,109.594,125.014)
OP1: (20.232,104.424,125.418)
OP2: (17.717,104.091,125.784)
C4: (23.450,108.678,126.543)
O5': (18.798,106.358,126.039)
C3': (18.094,109.208,125.774)
C1': (19.534,109.684,127.570)
O4': (18.819,108.498,127.880)
C5': (17.579,106.857,126.627)
P: (18.846,104.939,125.314)
O2: (21.594,111.446,127.489)
C4': (17.720,108.324,126.951)
C2': (18.772,110.389,126.449)
O2': (17.857,111.305,127.008)
N1: (20.905,109.308,127.184)
N3: (23.162,109.942,126.860)
N4: (24.714,108.376,126.251)
C6: (21.208,108.021,126.838)
C5: (22.454,107.666,126.517)
O3': (16.961,109.594,125.014)
Image (generated by PyMOL):