ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01259:01289

Extra

PDB:
ATOM 1 O3' G A1258 20.930 101.378 64.456 1.00 38.12 O
ATOM 2 P G A1259 21.214 102.674 63.529 1.00 41.74 P
ATOM 3 OP1 G A1259 20.082 102.799 62.576 1.00 43.64 O
ATOM 4 OP2 G A1259 22.605 102.605 63.001 1.00 40.82 O
ATOM 5 O5' G A1259 21.115 103.921 64.515 1.00 38.54 O
ATOM 6 C5' G A1259 19.859 104.310 65.071 1.00 36.88 C
ATOM 7 C4' G A1259 20.045 105.319 66.183 1.00 37.62 C
ATOM 8 O4' G A1259 21.068 104.855 67.110 1.00 39.03 O
ATOM 9 C3' G A1259 20.507 106.720 65.826 1.00 36.15 C
ATOM 10 O3' G A1259 19.434 107.513 65.329 1.00 39.37 O
ATOM 11 C2' G A1259 20.982 107.216 67.187 1.00 37.34 C
ATOM 12 O2' G A1259 19.922 107.526 68.066 1.00 36.24 O
ATOM 13 C1' G A1259 21.691 105.973 67.725 1.00 37.73 C
ATOM 14 N9 G A1259 23.110 105.987 67.368 1.00 37.58 N
ATOM 15 C8 G A1259 23.774 105.137 66.519 1.00 36.97 C
ATOM 16 N7 G A1259 25.023 105.470 66.338 1.00 37.82 N
ATOM 17 C5 G A1259 25.197 106.598 67.127 1.00 37.35 C
ATOM 18 C6 G A1259 26.330 107.424 67.305 1.00 36.13 C
ATOM 19 O6 G A1259 27.428 107.339 66.766 1.00 34.19 O
ATOM 20 N1 G A1259 26.079 108.452 68.205 1.00 36.54 N
ATOM 21 C2 G A1259 24.882 108.669 68.839 1.00 37.79 C
ATOM 22 N2 G A1259 24.822 109.709 69.670 1.00 36.00 N
ATOM 23 N3 G A1259 23.811 107.918 68.665 1.00 39.72 N
ATOM 24 C4 G A1259 24.038 106.908 67.797 1.00 38.07 C
ATOM 25 P C A1260 19.740 108.842 64.469 1.00 40.77 P
ATOM 26 OP1 C A1260 18.446 109.352 63.972 1.00 42.94 O
ATOM 27 OP2 C A1260 20.825 108.543 63.503 1.00 41.97 O
ATOM 28 O5' C A1260 20.275 109.900 65.530 1.00 37.74 O
TER

ATOM 1 O3' G B1288 20.940 114.405 77.098 1.00 37.71 O
ATOM 2 P A B1289 21.004 115.653 76.078 1.00 38.53 P
ATOM 3 OP1 A B1289 21.725 116.733 76.788 1.00 37.70 O
ATOM 4 OP2 A B1289 19.657 115.927 75.544 1.00 35.37 O
ATOM 5 O5' A B1289 21.912 115.116 74.879 1.00 36.30 O
ATOM 6 C5' A B1289 23.346 115.274 74.894 1.00 32.81 C
ATOM 7 C4' A B1289 23.951 114.644 73.663 1.00 33.00 C
ATOM 8 O4' A B1289 23.438 113.293 73.592 1.00 34.81 O
ATOM 9 C3' A B1289 23.596 115.246 72.308 1.00 31.44 C
ATOM 10 O3' A B1289 24.501 116.263 71.903 1.00 31.57 O
ATOM 11 C2' A B1289 23.795 114.059 71.375 1.00 33.37 C
ATOM 12 O2' A B1289 25.147 113.809 71.053 1.00 32.79 O
ATOM 13 C1' A B1289 23.293 112.905 72.239 1.00 33.58 C
ATOM 14 N9 A B1289 21.888 112.586 71.990 1.00 33.69 N
ATOM 15 C8 A B1289 20.786 113.350 72.283 1.00 33.14 C
ATOM 16 N7 A B1289 19.657 112.813 71.901 1.00 32.38 N
ATOM 17 C5 A B1289 20.037 111.610 71.322 1.00 33.81 C
ATOM 18 C6 A B1289 19.300 110.577 70.715 1.00 33.71 C
ATOM 19 N6 A B1289 17.980 110.618 70.548 1.00 36.33 N
ATOM 20 N1 A B1289 19.977 109.496 70.270 1.00 34.03 N
ATOM 21 C2 A B1289 21.309 109.476 70.407 1.00 35.38 C
ATOM 22 N3 A B1289 22.116 110.397 70.936 1.00 35.79 N
ATOM 23 C4 A B1289 21.408 111.450 71.384 1.00 33.97 C
ATOM 24 P G B1290 24.124 117.815 72.077 1.00 36.89 P
ATOM 25 OP1 G B1290 25.310 118.565 71.600 1.00 38.12 O
ATOM 26 OP2 G B1290 23.627 118.022 73.452 1.00 37.67 O
ATOM 27 O5' G B1290 22.890 118.137 71.112 1.00 39.29 O
TER

Atoms:
OP1: (20.082,102.799,62.576)
OP2: (22.605,102.605,63.001)
C3': (20.507,106.720,65.826)
C1': (21.691,105.973,67.725)
C5': (19.859,104.310,65.071)
O6: (27.428,107.339,66.766)
O4': (21.068,104.855,67.110)
C8: (23.774,105.137,66.519)
C2: (24.882,108.669,68.839)
C6: (26.330,107.424,67.305)
C5: (25.197,106.598,67.127)
C4: (24.038,106.908,67.797)
P: (21.214,102.674,63.529)
C4': (20.045,105.319,66.183)
C2': (20.982,107.216,67.187)
O2': (19.922,107.526,68.066)
N1: (26.079,108.452,68.205)
N2: (24.822,109.709,69.670)
N3: (23.811,107.918,68.665)
N7: (25.023,105.470,66.338)
N9: (23.110,105.987,67.368)
O5': (21.115,103.921,64.515)
O3': (19.434,107.513,65.329)
OP1: (21.725,116.733,76.788)
OP2: (19.657,115.927,75.544)
C3': (23.596,115.246,72.308)
C1': (23.293,112.905,72.239)
C5': (23.346,115.274,74.894)
O4': (23.438,113.293,73.592)
C8: (20.786,113.350,72.283)
O2': (25.147,113.809,71.053)
C6: (19.300,110.577,70.715)
C5: (20.037,111.610,71.322)
C4: (21.408,111.450,71.384)
P: (21.004,115.653,76.078)
C4': (23.951,114.644,73.663)
C2': (23.795,114.059,71.375)
C2: (21.309,109.476,70.407)
N1: (19.977,109.496,70.270)
N3: (22.116,110.397,70.936)
N6: (17.980,110.618,70.548)
N7: (19.657,112.813,71.901)
N9: (21.888,112.586,71.990)
O5': (21.912,115.116,74.879)
O3': (24.501,116.263,71.903)
Image (generated by PyMOL):
PyMOL image
show in jmol