Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A136:A73
Extra
PDB:
ATOM 1 O3' U A 135 22.723 47.502 34.547 1.00 31.15 O
ATOM 2 P G A 136 21.334 46.727 34.310 1.00 32.39 P
ATOM 3 OP1 G A 136 20.467 47.049 35.472 1.00 32.82 O
ATOM 4 OP2 G A 136 21.602 45.304 33.990 1.00 29.68 O
ATOM 5 O5' G A 136 20.782 47.499 33.041 1.00 30.93 O
ATOM 6 C5' G A 136 20.517 48.886 33.091 1.00 29.53 C
ATOM 7 C4' G A 136 20.268 49.428 31.711 1.00 30.69 C
ATOM 8 O4' G A 136 21.411 49.153 30.859 1.00 28.70 O
ATOM 9 C3' G A 136 19.093 48.813 30.964 1.00 31.98 C
ATOM 10 O3' G A 136 17.846 49.368 31.350 1.00 32.49 O
ATOM 11 C2' G A 136 19.449 49.086 29.508 1.00 28.98 C
ATOM 12 O2' G A 136 19.170 50.438 29.161 1.00 28.65 O
ATOM 13 C1' G A 136 20.969 48.907 29.537 1.00 27.53 C
ATOM 14 N9 G A 136 21.363 47.541 29.146 1.00 22.75 N
ATOM 15 C8 G A 136 21.719 46.511 29.977 1.00 25.45 C
ATOM 16 N7 G A 136 22.009 45.423 29.323 1.00 25.26 N
ATOM 17 C5 G A 136 21.820 45.759 27.988 1.00 25.35 C
ATOM 18 C6 G A 136 21.981 44.987 26.811 1.00 19.48 C
ATOM 19 O6 G A 136 22.336 43.817 26.732 1.00 22.27 O
ATOM 20 N1 G A 136 21.676 45.690 25.655 1.00 20.78 N
ATOM 21 C2 G A 136 21.285 46.999 25.618 1.00 22.67 C
ATOM 22 N2 G A 136 21.053 47.501 24.396 1.00 19.66 N
ATOM 23 N3 G A 136 21.128 47.743 26.711 1.00 24.23 N
ATOM 24 C4 G A 136 21.421 47.063 27.854 1.00 23.62 C
ATOM 25 P C A 137 16.498 48.521 31.110 1.00 33.72 P
ATOM 26 OP1 C A 137 15.424 49.375 31.682 1.00 38.15 O
ATOM 27 OP2 C A 137 16.662 47.128 31.590 1.00 27.87 O
ATOM 28 O5' C A 137 16.432 48.557 29.526 1.00 31.73 O
TER
ATOM 1 O3' A B 72 20.447 54.739 17.086 1.00 30.04 O
ATOM 2 P A B 73 20.934 54.679 18.627 1.00 38.17 P
ATOM 3 OP1 A B 73 20.123 55.633 19.427 1.00 34.43 O
ATOM 4 OP2 A B 73 22.415 54.821 18.606 1.00 37.20 O
ATOM 5 O5' A B 73 20.498 53.190 19.039 1.00 30.81 O
ATOM 6 C5' A B 73 21.182 52.036 18.571 1.00 30.98 C
ATOM 7 C4' A B 73 21.028 50.881 19.532 1.00 24.83 C
ATOM 8 O4' A B 73 21.563 51.229 20.839 1.00 23.00 O
ATOM 9 C3' A B 73 19.600 50.448 19.824 1.00 22.59 C
ATOM 10 O3' A B 73 19.075 49.620 18.800 1.00 24.80 O
ATOM 11 C2' A B 73 19.748 49.732 21.159 1.00 21.43 C
ATOM 12 O2' A B 73 20.292 48.440 20.953 1.00 21.77 O
ATOM 13 C1' A B 73 20.822 50.571 21.846 1.00 23.72 C
ATOM 14 N9 A B 73 20.247 51.570 22.764 1.00 24.11 N
ATOM 15 C8 A B 73 20.045 52.894 22.528 1.00 24.98 C
ATOM 16 N7 A B 73 19.507 53.521 23.549 1.00 27.62 N
ATOM 17 C5 A B 73 19.354 52.547 24.518 1.00 25.25 C
ATOM 18 C6 A B 73 18.839 52.573 25.827 1.00 28.57 C
ATOM 19 N6 A B 73 18.368 53.686 26.408 1.00 29.74 N
ATOM 20 N1 A B 73 18.824 51.410 26.526 1.00 26.49 N
ATOM 21 C2 A B 73 19.296 50.304 25.939 1.00 24.94 C
ATOM 22 N3 A B 73 19.800 50.166 24.710 1.00 22.47 N
ATOM 23 C4 A B 73 19.806 51.334 24.046 1.00 22.67 C
ATOM 24 P C B 74 17.684 49.961 18.057 1.00 25.58 P
ATOM 25 OP1 C B 74 17.435 48.854 17.124 1.00 23.14 O
ATOM 26 OP2 C B 74 17.719 51.352 17.534 1.00 24.96 O
ATOM 27 O5' C B 74 16.671 49.891 19.264 1.00 23.48 O
TER
ATOM 2 P G A 136 21.334 46.727 34.310 1.00 32.39 P
ATOM 3 OP1 G A 136 20.467 47.049 35.472 1.00 32.82 O
ATOM 4 OP2 G A 136 21.602 45.304 33.990 1.00 29.68 O
ATOM 5 O5' G A 136 20.782 47.499 33.041 1.00 30.93 O
ATOM 6 C5' G A 136 20.517 48.886 33.091 1.00 29.53 C
ATOM 7 C4' G A 136 20.268 49.428 31.711 1.00 30.69 C
ATOM 8 O4' G A 136 21.411 49.153 30.859 1.00 28.70 O
ATOM 9 C3' G A 136 19.093 48.813 30.964 1.00 31.98 C
ATOM 10 O3' G A 136 17.846 49.368 31.350 1.00 32.49 O
ATOM 11 C2' G A 136 19.449 49.086 29.508 1.00 28.98 C
ATOM 12 O2' G A 136 19.170 50.438 29.161 1.00 28.65 O
ATOM 13 C1' G A 136 20.969 48.907 29.537 1.00 27.53 C
ATOM 14 N9 G A 136 21.363 47.541 29.146 1.00 22.75 N
ATOM 15 C8 G A 136 21.719 46.511 29.977 1.00 25.45 C
ATOM 16 N7 G A 136 22.009 45.423 29.323 1.00 25.26 N
ATOM 17 C5 G A 136 21.820 45.759 27.988 1.00 25.35 C
ATOM 18 C6 G A 136 21.981 44.987 26.811 1.00 19.48 C
ATOM 19 O6 G A 136 22.336 43.817 26.732 1.00 22.27 O
ATOM 20 N1 G A 136 21.676 45.690 25.655 1.00 20.78 N
ATOM 21 C2 G A 136 21.285 46.999 25.618 1.00 22.67 C
ATOM 22 N2 G A 136 21.053 47.501 24.396 1.00 19.66 N
ATOM 23 N3 G A 136 21.128 47.743 26.711 1.00 24.23 N
ATOM 24 C4 G A 136 21.421 47.063 27.854 1.00 23.62 C
ATOM 25 P C A 137 16.498 48.521 31.110 1.00 33.72 P
ATOM 26 OP1 C A 137 15.424 49.375 31.682 1.00 38.15 O
ATOM 27 OP2 C A 137 16.662 47.128 31.590 1.00 27.87 O
ATOM 28 O5' C A 137 16.432 48.557 29.526 1.00 31.73 O
TER
ATOM 1 O3' A B 72 20.447 54.739 17.086 1.00 30.04 O
ATOM 2 P A B 73 20.934 54.679 18.627 1.00 38.17 P
ATOM 3 OP1 A B 73 20.123 55.633 19.427 1.00 34.43 O
ATOM 4 OP2 A B 73 22.415 54.821 18.606 1.00 37.20 O
ATOM 5 O5' A B 73 20.498 53.190 19.039 1.00 30.81 O
ATOM 6 C5' A B 73 21.182 52.036 18.571 1.00 30.98 C
ATOM 7 C4' A B 73 21.028 50.881 19.532 1.00 24.83 C
ATOM 8 O4' A B 73 21.563 51.229 20.839 1.00 23.00 O
ATOM 9 C3' A B 73 19.600 50.448 19.824 1.00 22.59 C
ATOM 10 O3' A B 73 19.075 49.620 18.800 1.00 24.80 O
ATOM 11 C2' A B 73 19.748 49.732 21.159 1.00 21.43 C
ATOM 12 O2' A B 73 20.292 48.440 20.953 1.00 21.77 O
ATOM 13 C1' A B 73 20.822 50.571 21.846 1.00 23.72 C
ATOM 14 N9 A B 73 20.247 51.570 22.764 1.00 24.11 N
ATOM 15 C8 A B 73 20.045 52.894 22.528 1.00 24.98 C
ATOM 16 N7 A B 73 19.507 53.521 23.549 1.00 27.62 N
ATOM 17 C5 A B 73 19.354 52.547 24.518 1.00 25.25 C
ATOM 18 C6 A B 73 18.839 52.573 25.827 1.00 28.57 C
ATOM 19 N6 A B 73 18.368 53.686 26.408 1.00 29.74 N
ATOM 20 N1 A B 73 18.824 51.410 26.526 1.00 26.49 N
ATOM 21 C2 A B 73 19.296 50.304 25.939 1.00 24.94 C
ATOM 22 N3 A B 73 19.800 50.166 24.710 1.00 22.47 N
ATOM 23 C4 A B 73 19.806 51.334 24.046 1.00 22.67 C
ATOM 24 P C B 74 17.684 49.961 18.057 1.00 25.58 P
ATOM 25 OP1 C B 74 17.435 48.854 17.124 1.00 23.14 O
ATOM 26 OP2 C B 74 17.719 51.352 17.534 1.00 24.96 O
ATOM 27 O5' C B 74 16.671 49.891 19.264 1.00 23.48 O
TER
Atoms:
OP1: (20.467,47.049,35.472)
OP2: (21.602,45.304,33.990)
C3': (19.093,48.813,30.964)
C1': (20.969,48.907,29.537)
C5': (20.517,48.886,33.091)
O6: (22.336,43.817,26.732)
O4': (21.411,49.153,30.859)
C8: (21.719,46.511,29.977)
C2: (21.285,46.999,25.618)
C6: (21.981,44.987,26.811)
C5: (21.820,45.759,27.988)
C4: (21.421,47.063,27.854)
P: (21.334,46.727,34.310)
C4': (20.268,49.428,31.711)
C2': (19.449,49.086,29.508)
O2': (19.170,50.438,29.161)
N1: (21.676,45.690,25.655)
N2: (21.053,47.501,24.396)
N3: (21.128,47.743,26.711)
N7: (22.009,45.423,29.323)
N9: (21.363,47.541,29.146)
O5': (20.782,47.499,33.041)
O3': (17.846,49.368,31.350)
OP2: (21.602,45.304,33.990)
C3': (19.093,48.813,30.964)
C1': (20.969,48.907,29.537)
C5': (20.517,48.886,33.091)
O6: (22.336,43.817,26.732)
O4': (21.411,49.153,30.859)
C8: (21.719,46.511,29.977)
C2: (21.285,46.999,25.618)
C6: (21.981,44.987,26.811)
C5: (21.820,45.759,27.988)
C4: (21.421,47.063,27.854)
P: (21.334,46.727,34.310)
C4': (20.268,49.428,31.711)
C2': (19.449,49.086,29.508)
O2': (19.170,50.438,29.161)
N1: (21.676,45.690,25.655)
N2: (21.053,47.501,24.396)
N3: (21.128,47.743,26.711)
N7: (22.009,45.423,29.323)
N9: (21.363,47.541,29.146)
O5': (20.782,47.499,33.041)
O3': (17.846,49.368,31.350)
OP1: (20.123,55.633,19.427)
OP2: (22.415,54.821,18.606)
C3': (19.600,50.448,19.824)
C1': (20.822,50.571,21.846)
C5': (21.182,52.036,18.571)
O4': (21.563,51.229,20.839)
C8: (20.045,52.894,22.528)
O2': (20.292,48.440,20.953)
C6: (18.839,52.573,25.827)
C5: (19.354,52.547,24.518)
C4: (19.806,51.334,24.046)
P: (20.934,54.679,18.627)
C4': (21.028,50.881,19.532)
C2': (19.748,49.732,21.159)
C2: (19.296,50.304,25.939)
N1: (18.824,51.410,26.526)
N3: (19.800,50.166,24.710)
N6: (18.368,53.686,26.408)
N7: (19.507,53.521,23.549)
N9: (20.247,51.570,22.764)
O5': (20.498,53.190,19.039)
O3': (19.075,49.620,18.800)
OP2: (22.415,54.821,18.606)
C3': (19.600,50.448,19.824)
C1': (20.822,50.571,21.846)
C5': (21.182,52.036,18.571)
O4': (21.563,51.229,20.839)
C8: (20.045,52.894,22.528)
O2': (20.292,48.440,20.953)
C6: (18.839,52.573,25.827)
C5: (19.354,52.547,24.518)
C4: (19.806,51.334,24.046)
P: (20.934,54.679,18.627)
C4': (21.028,50.881,19.532)
C2': (19.748,49.732,21.159)
C2: (19.296,50.304,25.939)
N1: (18.824,51.410,26.526)
N3: (19.800,50.166,24.710)
N6: (18.368,53.686,26.408)
N7: (19.507,53.521,23.549)
N9: (20.247,51.570,22.764)
O5': (20.498,53.190,19.039)
O3': (19.075,49.620,18.800)
Image (generated by PyMOL):