Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:445:460
Extra
PDB:
ATOM 1 O3' C A 44 56.079 19.256 123.274 1.00 52.02 O
ATOM 2 P G A 45 57.429 20.055 123.066 1.00 50.95 P
ATOM 3 OP1 G A 45 57.089 21.326 122.379 1.00 50.95 O
ATOM 4 OP2 G A 45 58.393 19.120 122.422 1.00 50.45 O
ATOM 5 O5' G A 45 57.861 20.353 124.571 1.00 51.90 O
ATOM 6 C5' G A 45 59.167 20.793 124.884 1.00 52.38 C
ATOM 7 C4' G A 45 59.705 20.072 126.084 1.00 52.89 C
ATOM 8 O4' G A 45 59.501 18.655 125.945 1.00 52.34 O
ATOM 9 C3' G A 45 61.189 20.202 126.307 1.00 53.27 C
ATOM 10 O3' G A 45 61.527 21.398 126.923 1.00 54.06 O
ATOM 11 C2' G A 45 61.528 18.987 127.140 1.00 53.41 C
ATOM 12 O2' G A 45 61.191 19.220 128.510 1.00 54.21 O
ATOM 13 C1' G A 45 60.562 17.958 126.560 1.00 52.62 C
ATOM 14 N9 G A 45 61.180 17.063 125.551 1.00 51.90 N
ATOM 15 C8 G A 45 60.620 16.896 124.328 1.00 51.12 C
ATOM 16 N7 G A 45 61.221 16.014 123.604 1.00 50.58 N
ATOM 17 C5 G A 45 62.255 15.543 124.375 1.00 51.02 C
ATOM 18 C6 G A 45 63.244 14.559 124.062 1.00 50.77 C
ATOM 19 O6 G A 45 63.411 13.887 123.025 1.00 50.09 O
ATOM 20 N1 G A 45 64.116 14.384 125.125 1.00 51.43 N
ATOM 21 C2 G A 45 64.017 15.039 126.316 1.00 52.23 C
ATOM 22 N2 G A 45 64.946 14.679 127.202 1.00 52.78 N
ATOM 23 N3 G A 45 63.105 15.953 126.611 1.00 52.48 N
ATOM 24 C4 G A 45 62.243 16.168 125.599 1.00 51.84 C
ATOM 25 P C A 46 62.788 22.177 126.405 1.00 54.36 P
ATOM 26 OP1 C A 46 62.763 23.508 127.076 1.00 55.20 O
ATOM 27 OP2 C A 46 62.762 22.115 124.926 1.00 53.51 O
ATOM 28 O5' C A 46 63.975 21.265 126.956 1.00 54.57 O
TER
ATOM 1 O3' U B 59 70.847 16.174 135.276 1.00 58.76 O
ATOM 2 P A B 60 70.925 17.286 134.143 1.00 60.36 P
ATOM 3 OP1 A B 60 72.340 17.422 133.754 1.00 60.53 O
ATOM 4 OP2 A B 60 70.196 18.479 134.644 1.00 60.88 O
ATOM 5 O5' A B 60 70.115 16.614 132.966 1.00 59.23 O
ATOM 6 C5' A B 60 70.514 15.364 132.441 1.00 58.64 C
ATOM 7 C4' A B 60 69.785 15.049 131.169 1.00 57.62 C
ATOM 8 O4' A B 60 68.357 14.946 131.421 1.00 57.41 O
ATOM 9 C3' A B 60 69.898 16.081 130.068 1.00 57.31 C
ATOM 10 O3' A B 60 71.105 15.950 129.361 1.00 57.17 O
ATOM 11 C2' A B 60 68.660 15.788 129.226 1.00 56.45 C
ATOM 12 O2' A B 60 68.862 14.632 128.420 1.00 55.72 O
ATOM 13 C1' A B 60 67.637 15.439 130.311 1.00 56.75 C
ATOM 14 N9 A B 60 66.858 16.626 130.741 1.00 57.18 N
ATOM 15 C8 A B 60 67.315 17.664 131.519 1.00 58.06 C
ATOM 16 N7 A B 60 66.396 18.565 131.733 1.00 58.28 N
ATOM 17 C5 A B 60 65.275 18.120 131.046 1.00 57.50 C
ATOM 18 C6 A B 60 63.982 18.638 130.878 1.00 57.32 C
ATOM 19 N6 A B 60 63.566 19.777 131.404 1.00 57.93 N
ATOM 20 N1 A B 60 63.085 17.960 130.163 1.00 56.53 N
ATOM 21 C2 A B 60 63.473 16.808 129.638 1.00 55.94 C
ATOM 22 N3 A B 60 64.660 16.212 129.703 1.00 56.02 N
ATOM 23 C4 A B 60 65.541 16.927 130.428 1.00 56.82 C
ATOM 24 P C B 61 71.629 17.101 128.389 1.00 58.34 P
ATOM 25 OP1 C B 61 72.569 17.932 129.170 1.00 59.29 O
ATOM 26 OP2 C B 61 70.463 17.745 127.775 1.00 57.90 O
ATOM 27 O5' C B 61 72.401 16.242 127.302 1.00 57.69 O
TER
ATOM 2 P G A 45 57.429 20.055 123.066 1.00 50.95 P
ATOM 3 OP1 G A 45 57.089 21.326 122.379 1.00 50.95 O
ATOM 4 OP2 G A 45 58.393 19.120 122.422 1.00 50.45 O
ATOM 5 O5' G A 45 57.861 20.353 124.571 1.00 51.90 O
ATOM 6 C5' G A 45 59.167 20.793 124.884 1.00 52.38 C
ATOM 7 C4' G A 45 59.705 20.072 126.084 1.00 52.89 C
ATOM 8 O4' G A 45 59.501 18.655 125.945 1.00 52.34 O
ATOM 9 C3' G A 45 61.189 20.202 126.307 1.00 53.27 C
ATOM 10 O3' G A 45 61.527 21.398 126.923 1.00 54.06 O
ATOM 11 C2' G A 45 61.528 18.987 127.140 1.00 53.41 C
ATOM 12 O2' G A 45 61.191 19.220 128.510 1.00 54.21 O
ATOM 13 C1' G A 45 60.562 17.958 126.560 1.00 52.62 C
ATOM 14 N9 G A 45 61.180 17.063 125.551 1.00 51.90 N
ATOM 15 C8 G A 45 60.620 16.896 124.328 1.00 51.12 C
ATOM 16 N7 G A 45 61.221 16.014 123.604 1.00 50.58 N
ATOM 17 C5 G A 45 62.255 15.543 124.375 1.00 51.02 C
ATOM 18 C6 G A 45 63.244 14.559 124.062 1.00 50.77 C
ATOM 19 O6 G A 45 63.411 13.887 123.025 1.00 50.09 O
ATOM 20 N1 G A 45 64.116 14.384 125.125 1.00 51.43 N
ATOM 21 C2 G A 45 64.017 15.039 126.316 1.00 52.23 C
ATOM 22 N2 G A 45 64.946 14.679 127.202 1.00 52.78 N
ATOM 23 N3 G A 45 63.105 15.953 126.611 1.00 52.48 N
ATOM 24 C4 G A 45 62.243 16.168 125.599 1.00 51.84 C
ATOM 25 P C A 46 62.788 22.177 126.405 1.00 54.36 P
ATOM 26 OP1 C A 46 62.763 23.508 127.076 1.00 55.20 O
ATOM 27 OP2 C A 46 62.762 22.115 124.926 1.00 53.51 O
ATOM 28 O5' C A 46 63.975 21.265 126.956 1.00 54.57 O
TER
ATOM 1 O3' U B 59 70.847 16.174 135.276 1.00 58.76 O
ATOM 2 P A B 60 70.925 17.286 134.143 1.00 60.36 P
ATOM 3 OP1 A B 60 72.340 17.422 133.754 1.00 60.53 O
ATOM 4 OP2 A B 60 70.196 18.479 134.644 1.00 60.88 O
ATOM 5 O5' A B 60 70.115 16.614 132.966 1.00 59.23 O
ATOM 6 C5' A B 60 70.514 15.364 132.441 1.00 58.64 C
ATOM 7 C4' A B 60 69.785 15.049 131.169 1.00 57.62 C
ATOM 8 O4' A B 60 68.357 14.946 131.421 1.00 57.41 O
ATOM 9 C3' A B 60 69.898 16.081 130.068 1.00 57.31 C
ATOM 10 O3' A B 60 71.105 15.950 129.361 1.00 57.17 O
ATOM 11 C2' A B 60 68.660 15.788 129.226 1.00 56.45 C
ATOM 12 O2' A B 60 68.862 14.632 128.420 1.00 55.72 O
ATOM 13 C1' A B 60 67.637 15.439 130.311 1.00 56.75 C
ATOM 14 N9 A B 60 66.858 16.626 130.741 1.00 57.18 N
ATOM 15 C8 A B 60 67.315 17.664 131.519 1.00 58.06 C
ATOM 16 N7 A B 60 66.396 18.565 131.733 1.00 58.28 N
ATOM 17 C5 A B 60 65.275 18.120 131.046 1.00 57.50 C
ATOM 18 C6 A B 60 63.982 18.638 130.878 1.00 57.32 C
ATOM 19 N6 A B 60 63.566 19.777 131.404 1.00 57.93 N
ATOM 20 N1 A B 60 63.085 17.960 130.163 1.00 56.53 N
ATOM 21 C2 A B 60 63.473 16.808 129.638 1.00 55.94 C
ATOM 22 N3 A B 60 64.660 16.212 129.703 1.00 56.02 N
ATOM 23 C4 A B 60 65.541 16.927 130.428 1.00 56.82 C
ATOM 24 P C B 61 71.629 17.101 128.389 1.00 58.34 P
ATOM 25 OP1 C B 61 72.569 17.932 129.170 1.00 59.29 O
ATOM 26 OP2 C B 61 70.463 17.745 127.775 1.00 57.90 O
ATOM 27 O5' C B 61 72.401 16.242 127.302 1.00 57.69 O
TER
Atoms:
OP1: (57.089,21.326,122.379)
OP2: (58.393,19.120,122.422)
C3': (61.189,20.202,126.307)
C1': (60.562,17.958,126.560)
C5': (59.167,20.793,124.884)
O6: (63.411,13.887,123.025)
O4': (59.501,18.655,125.945)
C8: (60.620,16.896,124.328)
C2: (64.017,15.039,126.316)
C6: (63.244,14.559,124.062)
C5: (62.255,15.543,124.375)
C4: (62.243,16.168,125.599)
P: (57.429,20.055,123.066)
C4': (59.705,20.072,126.084)
C2': (61.528,18.987,127.140)
O2': (61.191,19.220,128.510)
N1: (64.116,14.384,125.125)
N2: (64.946,14.679,127.202)
N3: (63.105,15.953,126.611)
N7: (61.221,16.014,123.604)
N9: (61.180,17.063,125.551)
O5': (57.861,20.353,124.571)
O3': (61.527,21.398,126.923)
OP2: (58.393,19.120,122.422)
C3': (61.189,20.202,126.307)
C1': (60.562,17.958,126.560)
C5': (59.167,20.793,124.884)
O6: (63.411,13.887,123.025)
O4': (59.501,18.655,125.945)
C8: (60.620,16.896,124.328)
C2: (64.017,15.039,126.316)
C6: (63.244,14.559,124.062)
C5: (62.255,15.543,124.375)
C4: (62.243,16.168,125.599)
P: (57.429,20.055,123.066)
C4': (59.705,20.072,126.084)
C2': (61.528,18.987,127.140)
O2': (61.191,19.220,128.510)
N1: (64.116,14.384,125.125)
N2: (64.946,14.679,127.202)
N3: (63.105,15.953,126.611)
N7: (61.221,16.014,123.604)
N9: (61.180,17.063,125.551)
O5': (57.861,20.353,124.571)
O3': (61.527,21.398,126.923)
OP1: (72.340,17.422,133.754)
OP2: (70.196,18.479,134.644)
C3': (69.898,16.081,130.068)
C1': (67.637,15.439,130.311)
C5': (70.514,15.364,132.441)
O4': (68.357,14.946,131.421)
C8: (67.315,17.664,131.519)
O2': (68.862,14.632,128.420)
C6: (63.982,18.638,130.878)
C5: (65.275,18.120,131.046)
C4: (65.541,16.927,130.428)
P: (70.925,17.286,134.143)
C4': (69.785,15.049,131.169)
C2': (68.660,15.788,129.226)
C2: (63.473,16.808,129.638)
N1: (63.085,17.960,130.163)
N3: (64.660,16.212,129.703)
N6: (63.566,19.777,131.404)
N7: (66.396,18.565,131.733)
N9: (66.858,16.626,130.741)
O5': (70.115,16.614,132.966)
O3': (71.105,15.950,129.361)
OP2: (70.196,18.479,134.644)
C3': (69.898,16.081,130.068)
C1': (67.637,15.439,130.311)
C5': (70.514,15.364,132.441)
O4': (68.357,14.946,131.421)
C8: (67.315,17.664,131.519)
O2': (68.862,14.632,128.420)
C6: (63.982,18.638,130.878)
C5: (65.275,18.120,131.046)
C4: (65.541,16.927,130.428)
P: (70.925,17.286,134.143)
C4': (69.785,15.049,131.169)
C2': (68.660,15.788,129.226)
C2: (63.473,16.808,129.638)
N1: (63.085,17.960,130.163)
N3: (64.660,16.212,129.703)
N6: (63.566,19.777,131.404)
N7: (66.396,18.565,131.733)
N9: (66.858,16.626,130.741)
O5': (70.115,16.614,132.966)
O3': (71.105,15.950,129.361)
Image (generated by PyMOL):