ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2425:A1940

Extra

PDB:
ATOM 1 O3' A A2424 78.011 139.247 127.969 1.00 37.91 O
ATOM 2 P G A2425 78.847 138.922 126.651 1.00 38.55 P
ATOM 3 OP1 G A2425 78.853 140.148 125.848 1.00 39.19 O
ATOM 4 OP2 G A2425 78.335 137.656 126.069 1.00 40.02 O
ATOM 5 O5' G A2425 80.324 138.662 127.180 1.00 39.97 O
ATOM 6 C5' G A2425 81.348 138.148 126.318 1.00 39.01 C
ATOM 7 C4' G A2425 82.590 137.880 127.120 1.00 39.06 C
ATOM 8 O4' G A2425 82.241 137.170 128.336 1.00 39.14 O
ATOM 9 C3' G A2425 83.594 136.980 126.441 1.00 38.71 C
ATOM 10 O3' G A2425 84.375 137.734 125.530 1.00 39.52 O
ATOM 11 C2' G A2425 84.382 136.443 127.627 1.00 39.62 C
ATOM 12 O2' G A2425 85.292 137.408 128.128 1.00 39.62 O
ATOM 13 C1' G A2425 83.262 136.246 128.658 1.00 40.30 C
ATOM 14 N9 G A2425 82.676 134.908 128.663 1.00 41.17 N
ATOM 15 C8 G A2425 81.363 134.567 128.402 1.00 41.82 C
ATOM 16 N7 G A2425 81.153 133.278 128.415 1.00 42.77 N
ATOM 17 C5 G A2425 82.395 132.732 128.714 1.00 43.03 C
ATOM 18 C6 G A2425 82.786 131.384 128.842 1.00 42.78 C
ATOM 19 O6 G A2425 82.102 130.372 128.684 1.00 42.25 O
ATOM 20 N1 G A2425 84.132 131.272 129.180 1.00 43.75 N
ATOM 21 C2 G A2425 84.997 132.329 129.362 1.00 44.26 C
ATOM 22 N2 G A2425 86.262 132.016 129.688 1.00 43.52 N
ATOM 23 N3 G A2425 84.648 133.597 129.228 1.00 43.43 N
ATOM 24 C4 G A2425 83.340 133.726 128.901 1.00 42.73 C
ATOM 25 P G A2426 84.996 137.022 124.234 1.00 41.97 P
ATOM 26 OP1 G A2426 85.594 138.058 123.351 1.00 42.11 O
ATOM 27 OP2 G A2426 83.987 136.074 123.676 1.00 42.04 O
ATOM 28 O5' G A2426 86.182 136.159 124.845 1.00 40.50 O
TER

ATOM 1 O3' C B1939 93.988 134.053 133.386 1.00 43.97 O
ATOM 2 P A B1940 94.865 133.500 132.164 1.00 45.79 P
ATOM 3 OP1 A B1940 95.922 132.642 132.722 1.00 46.12 O
ATOM 4 OP2 A B1940 95.236 134.642 131.278 1.00 45.66 O
ATOM 5 O5' A B1940 93.862 132.570 131.355 1.00 45.33 O
ATOM 6 C5' A B1940 93.268 131.413 131.952 1.00 42.72 C
ATOM 7 C4' A B1940 91.945 131.144 131.296 1.00 41.58 C
ATOM 8 O4' A B1940 91.017 132.203 131.592 1.00 40.99 O
ATOM 9 C3' A B1940 91.998 131.130 129.784 1.00 41.19 C
ATOM 10 O3' A B1940 92.348 129.868 129.333 1.00 41.54 O
ATOM 11 C2' A B1940 90.577 131.422 129.383 1.00 40.57 C
ATOM 12 O2' A B1940 89.818 130.233 129.384 1.00 40.30 O
ATOM 13 C1' A B1940 90.165 132.390 130.485 1.00 41.27 C
ATOM 14 N9 A B1940 90.345 133.738 129.973 1.00 41.84 N
ATOM 15 C8 A B1940 91.474 134.402 129.567 1.00 41.48 C
ATOM 16 N7 A B1940 91.229 135.596 129.086 1.00 42.74 N
ATOM 17 C5 A B1940 89.851 135.721 129.197 1.00 41.74 C
ATOM 18 C6 A B1940 88.958 136.734 128.848 1.00 41.78 C
ATOM 19 N6 A B1940 89.324 137.886 128.285 1.00 42.82 N
ATOM 20 N1 A B1940 87.641 136.522 129.097 1.00 41.01 N
ATOM 21 C2 A B1940 87.267 135.368 129.658 1.00 39.44 C
ATOM 22 N3 A B1940 88.009 134.350 130.022 1.00 41.08 N
ATOM 23 C4 A B1940 89.304 134.592 129.757 1.00 42.05 C
ATOM 24 P G B1941 93.563 129.730 128.340 1.00 42.68 P
ATOM 25 OP1 G B1941 93.571 128.283 128.070 1.00 42.97 O
ATOM 26 OP2 G B1941 94.721 130.384 128.995 1.00 43.20 O
ATOM 27 O5' G B1941 93.105 130.556 127.058 1.00 43.30 O
TER

Atoms:
OP1: (78.853,140.148,125.848)
OP2: (78.335,137.656,126.069)
C3': (83.594,136.980,126.441)
C1': (83.262,136.246,128.658)
C5': (81.348,138.148,126.318)
O6: (82.102,130.372,128.684)
O4': (82.241,137.170,128.336)
C8: (81.363,134.567,128.402)
C2: (84.997,132.329,129.362)
C6: (82.786,131.384,128.842)
C5: (82.395,132.732,128.714)
C4: (83.340,133.726,128.901)
P: (78.847,138.922,126.651)
C4': (82.590,137.880,127.120)
C2': (84.382,136.443,127.627)
O2': (85.292,137.408,128.128)
N1: (84.132,131.272,129.180)
N2: (86.262,132.016,129.688)
N3: (84.648,133.597,129.228)
N7: (81.153,133.278,128.415)
N9: (82.676,134.908,128.663)
O5': (80.324,138.662,127.180)
O3': (84.375,137.734,125.530)
OP1: (95.922,132.642,132.722)
OP2: (95.236,134.642,131.278)
C3': (91.998,131.130,129.784)
C1': (90.165,132.390,130.485)
C5': (93.268,131.413,131.952)
O4': (91.017,132.203,131.592)
C8: (91.474,134.402,129.567)
O2': (89.818,130.233,129.384)
C6: (88.958,136.734,128.848)
C5: (89.851,135.721,129.197)
C4: (89.304,134.592,129.757)
P: (94.865,133.500,132.164)
C4': (91.945,131.144,131.296)
C2': (90.577,131.422,129.383)
C2: (87.267,135.368,129.658)
N1: (87.641,136.522,129.097)
N3: (88.009,134.350,130.022)
N6: (89.324,137.886,128.285)
N7: (91.229,135.596,129.086)
N9: (90.345,133.738,129.973)
O5': (93.862,132.570,131.355)
O3': (92.348,129.868,129.333)
Image (generated by PyMOL):
PyMOL image
show in jmol