Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01386:01399
Extra
PDB:
ATOM 1 O3' C A1385 43.724 169.025 71.459 1.00 61.11 O
ATOM 2 P A A1386 42.259 168.420 71.683 1.00 62.80 P
ATOM 3 OP1 A A1386 41.435 168.761 70.490 1.00 60.08 O
ATOM 4 OP2 A A1386 41.823 168.858 73.041 1.00 60.68 O
ATOM 5 O5' A A1386 42.544 166.854 71.692 1.00 61.30 O
ATOM 6 C5' A A1386 41.499 165.898 71.504 1.00 61.03 C
ATOM 7 C4' A A1386 41.997 164.759 70.647 1.00 60.93 C
ATOM 8 O4' A A1386 42.178 165.217 69.281 1.00 61.47 O
ATOM 9 C3' A A1386 43.366 164.209 71.001 1.00 60.01 C
ATOM 10 O3' A A1386 43.362 163.351 72.125 1.00 57.40 O
ATOM 11 C2' A A1386 43.758 163.501 69.715 1.00 60.52 C
ATOM 12 O2' A A1386 43.111 162.257 69.547 1.00 61.92 O
ATOM 13 C1' A A1386 43.236 164.490 68.673 1.00 61.40 C
ATOM 14 N9 A A1386 44.275 165.434 68.268 1.00 62.59 N
ATOM 15 C8 A A1386 44.301 166.801 68.423 1.00 64.35 C
ATOM 16 N7 A A1386 45.403 167.362 67.980 1.00 65.23 N
ATOM 17 C5 A A1386 46.151 166.294 67.499 1.00 64.41 C
ATOM 18 C6 A A1386 47.432 166.217 66.913 1.00 64.33 C
ATOM 19 N6 A A1386 48.222 167.277 66.717 1.00 63.92 N
ATOM 20 N1 A A1386 47.879 164.996 66.538 1.00 64.19 N
ATOM 21 C2 A A1386 47.094 163.931 66.749 1.00 63.31 C
ATOM 22 N3 A A1386 45.882 163.873 67.298 1.00 64.24 N
ATOM 23 C4 A A1386 45.462 165.103 67.656 1.00 64.39 C
ATOM 24 P C A1387 44.656 163.302 73.072 1.00 57.42 P
ATOM 25 OP1 C A1387 44.402 162.310 74.146 1.00 57.35 O
ATOM 26 OP2 C A1387 45.024 164.692 73.438 1.00 57.79 O
ATOM 27 O5' C A1387 45.791 162.726 72.116 1.00 53.40 O
TER
ATOM 1 O3' C B1398 54.791 164.670 66.387 1.00 43.73 O
ATOM 2 P U B1399 54.714 164.866 64.799 1.00 46.03 P
ATOM 3 OP1 U B1399 54.629 163.496 64.231 1.00 43.16 O
ATOM 4 OP2 U B1399 55.817 165.773 64.375 1.00 44.83 O
ATOM 5 O5' U B1399 53.323 165.609 64.581 1.00 45.72 O
ATOM 6 C5' U B1399 52.082 164.904 64.774 1.00 49.82 C
ATOM 7 C4' U B1399 50.914 165.772 64.375 1.00 51.39 C
ATOM 8 O4' U B1399 50.743 166.841 65.336 1.00 51.51 O
ATOM 9 C3' U B1399 51.052 166.487 63.044 1.00 53.35 C
ATOM 10 O3' U B1399 50.726 165.639 61.955 1.00 58.66 O
ATOM 11 C2' U B1399 50.075 167.640 63.203 1.00 52.84 C
ATOM 12 O2' U B1399 48.729 167.231 63.047 1.00 52.92 O
ATOM 13 C1' U B1399 50.308 168.015 64.667 1.00 52.01 C
ATOM 14 N1 U B1399 51.317 169.071 64.868 1.00 50.81 N
ATOM 15 C2 U B1399 50.903 170.388 64.780 1.00 50.09 C
ATOM 16 O2 U B1399 49.750 170.710 64.530 1.00 50.61 O
ATOM 17 N3 U B1399 51.886 171.319 65.001 1.00 49.34 N
ATOM 18 C4 U B1399 53.208 171.079 65.296 1.00 49.37 C
ATOM 19 O4 U B1399 53.963 172.028 65.499 1.00 49.59 O
ATOM 20 C5 U B1399 53.563 169.699 65.362 1.00 50.26 C
ATOM 21 C6 U B1399 52.633 168.765 65.149 1.00 50.97 C
ATOM 22 P G B1400 51.435 165.867 60.534 1.00 61.99 P
ATOM 23 OP1 G B1400 50.926 164.799 59.642 1.00 63.17 O
ATOM 24 OP2 G B1400 52.899 166.018 60.740 1.00 63.10 O
ATOM 25 O5' G B1400 50.848 167.259 60.042 1.00 59.73 O
TER
ATOM 2 P A A1386 42.259 168.420 71.683 1.00 62.80 P
ATOM 3 OP1 A A1386 41.435 168.761 70.490 1.00 60.08 O
ATOM 4 OP2 A A1386 41.823 168.858 73.041 1.00 60.68 O
ATOM 5 O5' A A1386 42.544 166.854 71.692 1.00 61.30 O
ATOM 6 C5' A A1386 41.499 165.898 71.504 1.00 61.03 C
ATOM 7 C4' A A1386 41.997 164.759 70.647 1.00 60.93 C
ATOM 8 O4' A A1386 42.178 165.217 69.281 1.00 61.47 O
ATOM 9 C3' A A1386 43.366 164.209 71.001 1.00 60.01 C
ATOM 10 O3' A A1386 43.362 163.351 72.125 1.00 57.40 O
ATOM 11 C2' A A1386 43.758 163.501 69.715 1.00 60.52 C
ATOM 12 O2' A A1386 43.111 162.257 69.547 1.00 61.92 O
ATOM 13 C1' A A1386 43.236 164.490 68.673 1.00 61.40 C
ATOM 14 N9 A A1386 44.275 165.434 68.268 1.00 62.59 N
ATOM 15 C8 A A1386 44.301 166.801 68.423 1.00 64.35 C
ATOM 16 N7 A A1386 45.403 167.362 67.980 1.00 65.23 N
ATOM 17 C5 A A1386 46.151 166.294 67.499 1.00 64.41 C
ATOM 18 C6 A A1386 47.432 166.217 66.913 1.00 64.33 C
ATOM 19 N6 A A1386 48.222 167.277 66.717 1.00 63.92 N
ATOM 20 N1 A A1386 47.879 164.996 66.538 1.00 64.19 N
ATOM 21 C2 A A1386 47.094 163.931 66.749 1.00 63.31 C
ATOM 22 N3 A A1386 45.882 163.873 67.298 1.00 64.24 N
ATOM 23 C4 A A1386 45.462 165.103 67.656 1.00 64.39 C
ATOM 24 P C A1387 44.656 163.302 73.072 1.00 57.42 P
ATOM 25 OP1 C A1387 44.402 162.310 74.146 1.00 57.35 O
ATOM 26 OP2 C A1387 45.024 164.692 73.438 1.00 57.79 O
ATOM 27 O5' C A1387 45.791 162.726 72.116 1.00 53.40 O
TER
ATOM 1 O3' C B1398 54.791 164.670 66.387 1.00 43.73 O
ATOM 2 P U B1399 54.714 164.866 64.799 1.00 46.03 P
ATOM 3 OP1 U B1399 54.629 163.496 64.231 1.00 43.16 O
ATOM 4 OP2 U B1399 55.817 165.773 64.375 1.00 44.83 O
ATOM 5 O5' U B1399 53.323 165.609 64.581 1.00 45.72 O
ATOM 6 C5' U B1399 52.082 164.904 64.774 1.00 49.82 C
ATOM 7 C4' U B1399 50.914 165.772 64.375 1.00 51.39 C
ATOM 8 O4' U B1399 50.743 166.841 65.336 1.00 51.51 O
ATOM 9 C3' U B1399 51.052 166.487 63.044 1.00 53.35 C
ATOM 10 O3' U B1399 50.726 165.639 61.955 1.00 58.66 O
ATOM 11 C2' U B1399 50.075 167.640 63.203 1.00 52.84 C
ATOM 12 O2' U B1399 48.729 167.231 63.047 1.00 52.92 O
ATOM 13 C1' U B1399 50.308 168.015 64.667 1.00 52.01 C
ATOM 14 N1 U B1399 51.317 169.071 64.868 1.00 50.81 N
ATOM 15 C2 U B1399 50.903 170.388 64.780 1.00 50.09 C
ATOM 16 O2 U B1399 49.750 170.710 64.530 1.00 50.61 O
ATOM 17 N3 U B1399 51.886 171.319 65.001 1.00 49.34 N
ATOM 18 C4 U B1399 53.208 171.079 65.296 1.00 49.37 C
ATOM 19 O4 U B1399 53.963 172.028 65.499 1.00 49.59 O
ATOM 20 C5 U B1399 53.563 169.699 65.362 1.00 50.26 C
ATOM 21 C6 U B1399 52.633 168.765 65.149 1.00 50.97 C
ATOM 22 P G B1400 51.435 165.867 60.534 1.00 61.99 P
ATOM 23 OP1 G B1400 50.926 164.799 59.642 1.00 63.17 O
ATOM 24 OP2 G B1400 52.899 166.018 60.740 1.00 63.10 O
ATOM 25 O5' G B1400 50.848 167.259 60.042 1.00 59.73 O
TER
Atoms:
OP1: (41.435,168.761,70.490)
OP2: (41.823,168.858,73.041)
C3': (43.366,164.209,71.001)
C1': (43.236,164.490,68.673)
C5': (41.499,165.898,71.504)
O4': (42.178,165.217,69.281)
C8: (44.301,166.801,68.423)
O2': (43.111,162.257,69.547)
C6: (47.432,166.217,66.913)
C5: (46.151,166.294,67.499)
C4: (45.462,165.103,67.656)
P: (42.259,168.420,71.683)
C4': (41.997,164.759,70.647)
C2': (43.758,163.501,69.715)
C2: (47.094,163.931,66.749)
N1: (47.879,164.996,66.538)
N3: (45.882,163.873,67.298)
N6: (48.222,167.277,66.717)
N7: (45.403,167.362,67.980)
N9: (44.275,165.434,68.268)
O5': (42.544,166.854,71.692)
O3': (43.362,163.351,72.125)
OP2: (41.823,168.858,73.041)
C3': (43.366,164.209,71.001)
C1': (43.236,164.490,68.673)
C5': (41.499,165.898,71.504)
O4': (42.178,165.217,69.281)
C8: (44.301,166.801,68.423)
O2': (43.111,162.257,69.547)
C6: (47.432,166.217,66.913)
C5: (46.151,166.294,67.499)
C4: (45.462,165.103,67.656)
P: (42.259,168.420,71.683)
C4': (41.997,164.759,70.647)
C2': (43.758,163.501,69.715)
C2: (47.094,163.931,66.749)
N1: (47.879,164.996,66.538)
N3: (45.882,163.873,67.298)
N6: (48.222,167.277,66.717)
N7: (45.403,167.362,67.980)
N9: (44.275,165.434,68.268)
O5': (42.544,166.854,71.692)
O3': (43.362,163.351,72.125)
C4: (53.208,171.079,65.296)
N3: (51.886,171.319,65.001)
OP1: (54.629,163.496,64.231)
OP2: (55.817,165.773,64.375)
C2: (50.903,170.388,64.780)
C1': (50.308,168.015,64.667)
C3': (51.052,166.487,63.044)
O5': (53.323,165.609,64.581)
O4': (50.743,166.841,65.336)
C5': (52.082,164.904,64.774)
P: (54.714,164.866,64.799)
C4': (50.914,165.772,64.375)
C2': (50.075,167.640,63.203)
O2': (48.729,167.231,63.047)
N1: (51.317,169.071,64.868)
O4: (53.963,172.028,65.499)
O2: (49.750,170.710,64.530)
C6: (52.633,168.765,65.149)
C5: (53.563,169.699,65.362)
O3': (50.726,165.639,61.955)
N3: (51.886,171.319,65.001)
OP1: (54.629,163.496,64.231)
OP2: (55.817,165.773,64.375)
C2: (50.903,170.388,64.780)
C1': (50.308,168.015,64.667)
C3': (51.052,166.487,63.044)
O5': (53.323,165.609,64.581)
O4': (50.743,166.841,65.336)
C5': (52.082,164.904,64.774)
P: (54.714,164.866,64.799)
C4': (50.914,165.772,64.375)
C2': (50.075,167.640,63.203)
O2': (48.729,167.231,63.047)
N1: (51.317,169.071,64.868)
O4: (53.963,172.028,65.499)
O2: (49.750,170.710,64.530)
C6: (52.633,168.765,65.149)
C5: (53.563,169.699,65.362)
O3': (50.726,165.639,61.955)
Image (generated by PyMOL):