Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B8:B43
Extra
PDB:
ATOM 1 O3' G A 7 -25.377 -12.274 11.368 1.00 38.24 O
ATOM 2 P G A 8 -24.608 -13.634 11.756 1.00 37.71 P
ATOM 3 OP1 G A 8 -24.776 -14.593 10.637 1.00 38.22 O
ATOM 4 OP2 G A 8 -25.022 -14.025 13.129 1.00 35.68 O
ATOM 5 O5' G A 8 -23.075 -13.203 11.785 1.00 36.89 O
ATOM 6 C5' G A 8 -22.694 -11.952 12.350 1.00 35.80 C
ATOM 7 C4' G A 8 -21.204 -11.800 12.383 1.00 35.54 C
ATOM 8 O4' G A 8 -20.934 -10.667 13.254 1.00 35.94 O
ATOM 9 C3' G A 8 -20.475 -12.978 13.016 1.00 34.86 C
ATOM 10 O3' G A 8 -20.023 -13.898 12.035 1.00 33.74 O
ATOM 11 C2' G A 8 -19.344 -12.308 13.779 1.00 34.55 C
ATOM 12 O2' G A 8 -18.288 -11.945 12.916 1.00 35.18 O
ATOM 13 C1' G A 8 -20.054 -11.056 14.291 1.00 34.53 C
ATOM 14 N9 G A 8 -20.866 -11.327 15.479 1.00 33.40 N
ATOM 15 C8 G A 8 -22.190 -11.712 15.514 1.00 32.88 C
ATOM 16 N7 G A 8 -22.639 -11.899 16.726 1.00 32.09 N
ATOM 17 C5 G A 8 -21.555 -11.613 17.541 1.00 31.60 C
ATOM 18 C6 G A 8 -21.440 -11.635 18.947 1.00 31.36 C
ATOM 19 O6 G A 8 -22.302 -11.912 19.783 1.00 32.71 O
ATOM 20 N1 G A 8 -20.160 -11.282 19.360 1.00 31.33 N
ATOM 21 C2 G A 8 -19.127 -10.944 18.518 1.00 31.99 C
ATOM 22 N2 G A 8 -17.972 -10.626 19.091 1.00 33.06 N
ATOM 23 N3 G A 8 -19.222 -10.917 17.207 1.00 31.46 N
ATOM 24 C4 G A 8 -20.453 -11.259 16.787 1.00 32.48 C
ATOM 25 P G A 9 -19.379 -15.291 12.500 1.00 33.16 P
ATOM 26 OP1 G A 9 -18.967 -16.041 11.287 1.00 33.62 O
ATOM 27 OP2 G A 9 -20.295 -15.924 13.489 1.00 31.09 O
ATOM 28 O5' G A 9 -18.063 -14.839 13.269 1.00 32.64 O
TER
ATOM 1 O3' A B 42 -8.167 -6.538 19.865 1.00 24.23 O
ATOM 2 P A B 43 -9.142 -6.448 21.141 1.00 25.56 P
ATOM 3 OP1 A B 43 -9.894 -5.167 21.111 1.00 24.02 O
ATOM 4 OP2 A B 43 -8.332 -6.800 22.330 1.00 26.07 O
ATOM 5 O5' A B 43 -10.179 -7.632 20.917 1.00 25.17 O
ATOM 6 C5' A B 43 -11.163 -7.531 19.897 1.00 24.57 C
ATOM 7 C4' A B 43 -12.366 -8.359 20.244 1.00 24.29 C
ATOM 8 O4' A B 43 -13.441 -7.921 19.385 1.00 24.88 O
ATOM 9 C3' A B 43 -12.232 -9.855 20.005 1.00 24.20 C
ATOM 10 O3' A B 43 -11.743 -10.528 21.168 1.00 24.82 O
ATOM 11 C2' A B 43 -13.666 -10.263 19.680 1.00 24.45 C
ATOM 12 O2' A B 43 -14.458 -10.456 20.838 1.00 23.89 O
ATOM 13 C1' A B 43 -14.189 -9.028 18.940 1.00 23.72 C
ATOM 14 N9 A B 43 -14.062 -9.075 17.482 1.00 22.86 N
ATOM 15 C8 A B 43 -13.038 -8.561 16.722 1.00 22.12 C
ATOM 16 N7 A B 43 -13.189 -8.744 15.435 1.00 21.88 N
ATOM 17 C5 A B 43 -14.390 -9.428 15.334 1.00 21.61 C
ATOM 18 C6 A B 43 -15.106 -9.913 14.232 1.00 21.59 C
ATOM 19 N6 A B 43 -14.696 -9.784 12.970 1.00 21.94 N
ATOM 20 N1 A B 43 -16.277 -10.544 14.471 1.00 21.36 N
ATOM 21 C2 A B 43 -16.689 -10.671 15.734 1.00 21.82 C
ATOM 22 N3 A B 43 -16.107 -10.259 16.857 1.00 23.00 N
ATOM 23 C4 A B 43 -14.943 -9.637 16.586 1.00 23.12 C
ATOM 24 P C B 44 -10.836 -11.851 21.014 1.00 24.86 P
ATOM 25 OP1 C B 44 -10.983 -12.716 22.202 1.00 24.07 O
ATOM 26 OP2 C B 44 -9.473 -11.446 20.563 1.00 25.43 O
ATOM 27 O5' C B 44 -11.527 -12.628 19.826 1.00 23.82 O
TER
ATOM 2 P G A 8 -24.608 -13.634 11.756 1.00 37.71 P
ATOM 3 OP1 G A 8 -24.776 -14.593 10.637 1.00 38.22 O
ATOM 4 OP2 G A 8 -25.022 -14.025 13.129 1.00 35.68 O
ATOM 5 O5' G A 8 -23.075 -13.203 11.785 1.00 36.89 O
ATOM 6 C5' G A 8 -22.694 -11.952 12.350 1.00 35.80 C
ATOM 7 C4' G A 8 -21.204 -11.800 12.383 1.00 35.54 C
ATOM 8 O4' G A 8 -20.934 -10.667 13.254 1.00 35.94 O
ATOM 9 C3' G A 8 -20.475 -12.978 13.016 1.00 34.86 C
ATOM 10 O3' G A 8 -20.023 -13.898 12.035 1.00 33.74 O
ATOM 11 C2' G A 8 -19.344 -12.308 13.779 1.00 34.55 C
ATOM 12 O2' G A 8 -18.288 -11.945 12.916 1.00 35.18 O
ATOM 13 C1' G A 8 -20.054 -11.056 14.291 1.00 34.53 C
ATOM 14 N9 G A 8 -20.866 -11.327 15.479 1.00 33.40 N
ATOM 15 C8 G A 8 -22.190 -11.712 15.514 1.00 32.88 C
ATOM 16 N7 G A 8 -22.639 -11.899 16.726 1.00 32.09 N
ATOM 17 C5 G A 8 -21.555 -11.613 17.541 1.00 31.60 C
ATOM 18 C6 G A 8 -21.440 -11.635 18.947 1.00 31.36 C
ATOM 19 O6 G A 8 -22.302 -11.912 19.783 1.00 32.71 O
ATOM 20 N1 G A 8 -20.160 -11.282 19.360 1.00 31.33 N
ATOM 21 C2 G A 8 -19.127 -10.944 18.518 1.00 31.99 C
ATOM 22 N2 G A 8 -17.972 -10.626 19.091 1.00 33.06 N
ATOM 23 N3 G A 8 -19.222 -10.917 17.207 1.00 31.46 N
ATOM 24 C4 G A 8 -20.453 -11.259 16.787 1.00 32.48 C
ATOM 25 P G A 9 -19.379 -15.291 12.500 1.00 33.16 P
ATOM 26 OP1 G A 9 -18.967 -16.041 11.287 1.00 33.62 O
ATOM 27 OP2 G A 9 -20.295 -15.924 13.489 1.00 31.09 O
ATOM 28 O5' G A 9 -18.063 -14.839 13.269 1.00 32.64 O
TER
ATOM 1 O3' A B 42 -8.167 -6.538 19.865 1.00 24.23 O
ATOM 2 P A B 43 -9.142 -6.448 21.141 1.00 25.56 P
ATOM 3 OP1 A B 43 -9.894 -5.167 21.111 1.00 24.02 O
ATOM 4 OP2 A B 43 -8.332 -6.800 22.330 1.00 26.07 O
ATOM 5 O5' A B 43 -10.179 -7.632 20.917 1.00 25.17 O
ATOM 6 C5' A B 43 -11.163 -7.531 19.897 1.00 24.57 C
ATOM 7 C4' A B 43 -12.366 -8.359 20.244 1.00 24.29 C
ATOM 8 O4' A B 43 -13.441 -7.921 19.385 1.00 24.88 O
ATOM 9 C3' A B 43 -12.232 -9.855 20.005 1.00 24.20 C
ATOM 10 O3' A B 43 -11.743 -10.528 21.168 1.00 24.82 O
ATOM 11 C2' A B 43 -13.666 -10.263 19.680 1.00 24.45 C
ATOM 12 O2' A B 43 -14.458 -10.456 20.838 1.00 23.89 O
ATOM 13 C1' A B 43 -14.189 -9.028 18.940 1.00 23.72 C
ATOM 14 N9 A B 43 -14.062 -9.075 17.482 1.00 22.86 N
ATOM 15 C8 A B 43 -13.038 -8.561 16.722 1.00 22.12 C
ATOM 16 N7 A B 43 -13.189 -8.744 15.435 1.00 21.88 N
ATOM 17 C5 A B 43 -14.390 -9.428 15.334 1.00 21.61 C
ATOM 18 C6 A B 43 -15.106 -9.913 14.232 1.00 21.59 C
ATOM 19 N6 A B 43 -14.696 -9.784 12.970 1.00 21.94 N
ATOM 20 N1 A B 43 -16.277 -10.544 14.471 1.00 21.36 N
ATOM 21 C2 A B 43 -16.689 -10.671 15.734 1.00 21.82 C
ATOM 22 N3 A B 43 -16.107 -10.259 16.857 1.00 23.00 N
ATOM 23 C4 A B 43 -14.943 -9.637 16.586 1.00 23.12 C
ATOM 24 P C B 44 -10.836 -11.851 21.014 1.00 24.86 P
ATOM 25 OP1 C B 44 -10.983 -12.716 22.202 1.00 24.07 O
ATOM 26 OP2 C B 44 -9.473 -11.446 20.563 1.00 25.43 O
ATOM 27 O5' C B 44 -11.527 -12.628 19.826 1.00 23.82 O
TER
Atoms:
OP1: (-24.776,-14.593,10.637)
OP2: (-25.022,-14.025,13.129)
C3': (-20.475,-12.978,13.016)
C1': (-20.054,-11.056,14.291)
C5': (-22.694,-11.952,12.350)
O6: (-22.302,-11.912,19.783)
O4': (-20.934,-10.667,13.254)
C8: (-22.190,-11.712,15.514)
C2: (-19.127,-10.944,18.518)
C6: (-21.440,-11.635,18.947)
C5: (-21.555,-11.613,17.541)
C4: (-20.453,-11.259,16.787)
P: (-24.608,-13.634,11.756)
C4': (-21.204,-11.800,12.383)
C2': (-19.344,-12.308,13.779)
O2': (-18.288,-11.945,12.916)
N1: (-20.160,-11.282,19.360)
N2: (-17.972,-10.626,19.091)
N3: (-19.222,-10.917,17.207)
N7: (-22.639,-11.899,16.726)
N9: (-20.866,-11.327,15.479)
O5': (-23.075,-13.203,11.785)
O3': (-20.023,-13.898,12.035)
OP2: (-25.022,-14.025,13.129)
C3': (-20.475,-12.978,13.016)
C1': (-20.054,-11.056,14.291)
C5': (-22.694,-11.952,12.350)
O6: (-22.302,-11.912,19.783)
O4': (-20.934,-10.667,13.254)
C8: (-22.190,-11.712,15.514)
C2: (-19.127,-10.944,18.518)
C6: (-21.440,-11.635,18.947)
C5: (-21.555,-11.613,17.541)
C4: (-20.453,-11.259,16.787)
P: (-24.608,-13.634,11.756)
C4': (-21.204,-11.800,12.383)
C2': (-19.344,-12.308,13.779)
O2': (-18.288,-11.945,12.916)
N1: (-20.160,-11.282,19.360)
N2: (-17.972,-10.626,19.091)
N3: (-19.222,-10.917,17.207)
N7: (-22.639,-11.899,16.726)
N9: (-20.866,-11.327,15.479)
O5': (-23.075,-13.203,11.785)
O3': (-20.023,-13.898,12.035)
OP1: (-9.894,-5.167,21.111)
OP2: (-8.332,-6.800,22.330)
C3': (-12.232,-9.855,20.005)
C1': (-14.189,-9.028,18.940)
C5': (-11.163,-7.531,19.897)
O4': (-13.441,-7.921,19.385)
C8: (-13.038,-8.561,16.722)
O2': (-14.458,-10.456,20.838)
C6: (-15.106,-9.913,14.232)
C5: (-14.390,-9.428,15.334)
C4: (-14.943,-9.637,16.586)
P: (-9.142,-6.448,21.141)
C4': (-12.366,-8.359,20.244)
C2': (-13.666,-10.263,19.680)
C2: (-16.689,-10.671,15.734)
N1: (-16.277,-10.544,14.471)
N3: (-16.107,-10.259,16.857)
N6: (-14.696,-9.784,12.970)
N7: (-13.189,-8.744,15.435)
N9: (-14.062,-9.075,17.482)
O5': (-10.179,-7.632,20.917)
O3': (-11.743,-10.528,21.168)
OP2: (-8.332,-6.800,22.330)
C3': (-12.232,-9.855,20.005)
C1': (-14.189,-9.028,18.940)
C5': (-11.163,-7.531,19.897)
O4': (-13.441,-7.921,19.385)
C8: (-13.038,-8.561,16.722)
O2': (-14.458,-10.456,20.838)
C6: (-15.106,-9.913,14.232)
C5: (-14.390,-9.428,15.334)
C4: (-14.943,-9.637,16.586)
P: (-9.142,-6.448,21.141)
C4': (-12.366,-8.359,20.244)
C2': (-13.666,-10.263,19.680)
C2: (-16.689,-10.671,15.734)
N1: (-16.277,-10.544,14.471)
N3: (-16.107,-10.259,16.857)
N6: (-14.696,-9.784,12.970)
N7: (-13.189,-8.744,15.435)
N9: (-14.062,-9.075,17.482)
O5': (-10.179,-7.632,20.917)
O3': (-11.743,-10.528,21.168)
Image (generated by PyMOL):