Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0498:0499
Extra
PDB:
ATOM 1 O3' A A 497 19.475 154.695 65.307 1.00 59.75 O
ATOM 2 P U A 498 19.282 154.965 66.880 1.00 60.66 P
ATOM 3 OP1 U A 498 17.852 154.748 67.208 1.00 61.58 O
ATOM 4 OP2 U A 498 19.924 156.251 67.229 1.00 62.10 O
ATOM 5 O5' U A 498 20.117 153.807 67.583 1.00 64.71 O
ATOM 6 C5' U A 498 21.214 153.155 66.913 1.00 69.92 C
ATOM 7 C4' U A 498 20.967 151.663 66.849 1.00 74.06 C
ATOM 8 O4' U A 498 20.820 151.147 68.205 1.00 77.33 O
ATOM 9 C3' U A 498 19.698 151.248 66.110 1.00 74.03 C
ATOM 10 O3' U A 498 19.884 149.968 65.530 1.00 70.64 O
ATOM 11 C2' U A 498 18.672 151.148 67.231 1.00 76.98 C
ATOM 12 O2' U A 498 17.604 150.271 66.924 1.00 78.63 O
ATOM 13 C1' U A 498 19.524 150.594 68.374 1.00 79.76 C
ATOM 14 N1 U A 498 19.010 150.987 69.698 1.00 82.66 N
ATOM 15 C2 U A 498 18.075 150.155 70.311 1.00 84.41 C
ATOM 16 O2 U A 498 17.681 149.099 69.821 1.00 83.82 O
ATOM 17 N3 U A 498 17.613 150.610 71.522 1.00 85.06 N
ATOM 18 C4 U A 498 17.974 151.775 72.170 1.00 84.08 C
ATOM 19 O4 U A 498 17.417 152.075 73.225 1.00 85.47 O
ATOM 20 C5 U A 498 18.949 152.562 71.487 1.00 83.37 C
ATOM 21 C6 U A 498 19.423 152.154 70.309 1.00 83.02 C
ATOM 22 P A A 499 18.984 149.522 64.279 1.00 70.61 P
ATOM 23 OP1 A A 499 17.834 150.452 64.142 1.00 70.56 O
ATOM 24 OP2 A A 499 18.725 148.063 64.473 1.00 72.27 O
ATOM 25 O5' A A 499 19.954 149.742 63.030 1.00 65.15 O
TER
ATOM 1 O3' U B 498 19.884 149.968 65.530 1.00 70.64 O
ATOM 2 P A B 499 18.984 149.522 64.279 1.00 70.61 P
ATOM 3 OP1 A B 499 17.834 150.452 64.142 1.00 70.56 O
ATOM 4 OP2 A B 499 18.725 148.063 64.473 1.00 72.27 O
ATOM 5 O5' A B 499 19.954 149.742 63.030 1.00 65.15 O
ATOM 6 C5' A B 499 20.697 150.973 62.889 1.00 58.16 C
ATOM 7 C4' A B 499 21.689 150.877 61.751 1.00 53.07 C
ATOM 8 O4' A B 499 20.988 150.604 60.509 1.00 51.93 O
ATOM 9 C3' A B 499 22.437 152.172 61.476 1.00 50.86 C
ATOM 10 O3' A B 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 11 C2' A B 499 22.833 152.021 60.018 1.00 50.50 C
ATOM 12 O2' A B 499 23.962 151.199 59.843 1.00 50.54 O
ATOM 13 C1' A B 499 21.593 151.328 59.445 1.00 50.96 C
ATOM 14 N9 A B 499 20.620 152.298 58.936 1.00 50.21 N
ATOM 15 C8 A B 499 19.448 152.706 59.523 1.00 49.41 C
ATOM 16 N7 A B 499 18.814 153.630 58.849 1.00 49.06 N
ATOM 17 C5 A B 499 19.613 153.840 57.738 1.00 49.67 C
ATOM 18 C6 A B 499 19.495 154.708 56.642 1.00 49.66 C
ATOM 19 N6 A B 499 18.492 155.571 56.490 1.00 48.64 N
ATOM 20 N1 A B 499 20.460 154.665 55.699 1.00 50.18 N
ATOM 21 C2 A B 499 21.472 153.809 55.861 1.00 50.51 C
ATOM 22 N3 A B 499 21.699 152.947 56.851 1.00 50.02 N
ATOM 23 C4 A B 499 20.721 153.014 57.769 1.00 49.61 C
ATOM 24 P G B 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 25 OP1 G B 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 26 OP2 G B 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 27 O5' G B 500 24.138 154.750 62.215 1.00 45.29 O
TER
ATOM 2 P U A 498 19.282 154.965 66.880 1.00 60.66 P
ATOM 3 OP1 U A 498 17.852 154.748 67.208 1.00 61.58 O
ATOM 4 OP2 U A 498 19.924 156.251 67.229 1.00 62.10 O
ATOM 5 O5' U A 498 20.117 153.807 67.583 1.00 64.71 O
ATOM 6 C5' U A 498 21.214 153.155 66.913 1.00 69.92 C
ATOM 7 C4' U A 498 20.967 151.663 66.849 1.00 74.06 C
ATOM 8 O4' U A 498 20.820 151.147 68.205 1.00 77.33 O
ATOM 9 C3' U A 498 19.698 151.248 66.110 1.00 74.03 C
ATOM 10 O3' U A 498 19.884 149.968 65.530 1.00 70.64 O
ATOM 11 C2' U A 498 18.672 151.148 67.231 1.00 76.98 C
ATOM 12 O2' U A 498 17.604 150.271 66.924 1.00 78.63 O
ATOM 13 C1' U A 498 19.524 150.594 68.374 1.00 79.76 C
ATOM 14 N1 U A 498 19.010 150.987 69.698 1.00 82.66 N
ATOM 15 C2 U A 498 18.075 150.155 70.311 1.00 84.41 C
ATOM 16 O2 U A 498 17.681 149.099 69.821 1.00 83.82 O
ATOM 17 N3 U A 498 17.613 150.610 71.522 1.00 85.06 N
ATOM 18 C4 U A 498 17.974 151.775 72.170 1.00 84.08 C
ATOM 19 O4 U A 498 17.417 152.075 73.225 1.00 85.47 O
ATOM 20 C5 U A 498 18.949 152.562 71.487 1.00 83.37 C
ATOM 21 C6 U A 498 19.423 152.154 70.309 1.00 83.02 C
ATOM 22 P A A 499 18.984 149.522 64.279 1.00 70.61 P
ATOM 23 OP1 A A 499 17.834 150.452 64.142 1.00 70.56 O
ATOM 24 OP2 A A 499 18.725 148.063 64.473 1.00 72.27 O
ATOM 25 O5' A A 499 19.954 149.742 63.030 1.00 65.15 O
TER
ATOM 1 O3' U B 498 19.884 149.968 65.530 1.00 70.64 O
ATOM 2 P A B 499 18.984 149.522 64.279 1.00 70.61 P
ATOM 3 OP1 A B 499 17.834 150.452 64.142 1.00 70.56 O
ATOM 4 OP2 A B 499 18.725 148.063 64.473 1.00 72.27 O
ATOM 5 O5' A B 499 19.954 149.742 63.030 1.00 65.15 O
ATOM 6 C5' A B 499 20.697 150.973 62.889 1.00 58.16 C
ATOM 7 C4' A B 499 21.689 150.877 61.751 1.00 53.07 C
ATOM 8 O4' A B 499 20.988 150.604 60.509 1.00 51.93 O
ATOM 9 C3' A B 499 22.437 152.172 61.476 1.00 50.86 C
ATOM 10 O3' A B 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 11 C2' A B 499 22.833 152.021 60.018 1.00 50.50 C
ATOM 12 O2' A B 499 23.962 151.199 59.843 1.00 50.54 O
ATOM 13 C1' A B 499 21.593 151.328 59.445 1.00 50.96 C
ATOM 14 N9 A B 499 20.620 152.298 58.936 1.00 50.21 N
ATOM 15 C8 A B 499 19.448 152.706 59.523 1.00 49.41 C
ATOM 16 N7 A B 499 18.814 153.630 58.849 1.00 49.06 N
ATOM 17 C5 A B 499 19.613 153.840 57.738 1.00 49.67 C
ATOM 18 C6 A B 499 19.495 154.708 56.642 1.00 49.66 C
ATOM 19 N6 A B 499 18.492 155.571 56.490 1.00 48.64 N
ATOM 20 N1 A B 499 20.460 154.665 55.699 1.00 50.18 N
ATOM 21 C2 A B 499 21.472 153.809 55.861 1.00 50.51 C
ATOM 22 N3 A B 499 21.699 152.947 56.851 1.00 50.02 N
ATOM 23 C4 A B 499 20.721 153.014 57.769 1.00 49.61 C
ATOM 24 P G B 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 25 OP1 G B 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 26 OP2 G B 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 27 O5' G B 500 24.138 154.750 62.215 1.00 45.29 O
TER
Atoms:
C4: (17.974,151.775,72.170)
N3: (17.613,150.610,71.522)
OP1: (17.852,154.748,67.208)
OP2: (19.924,156.251,67.229)
C2: (18.075,150.155,70.311)
C1': (19.524,150.594,68.374)
C3': (19.698,151.248,66.110)
O5': (20.117,153.807,67.583)
O4': (20.820,151.147,68.205)
C5': (21.214,153.155,66.913)
P: (19.282,154.965,66.880)
C4': (20.967,151.663,66.849)
C2': (18.672,151.148,67.231)
O2': (17.604,150.271,66.924)
N1: (19.010,150.987,69.698)
O4: (17.417,152.075,73.225)
O2: (17.681,149.099,69.821)
C6: (19.423,152.154,70.309)
C5: (18.949,152.562,71.487)
O3': (19.884,149.968,65.530)
N3: (17.613,150.610,71.522)
OP1: (17.852,154.748,67.208)
OP2: (19.924,156.251,67.229)
C2: (18.075,150.155,70.311)
C1': (19.524,150.594,68.374)
C3': (19.698,151.248,66.110)
O5': (20.117,153.807,67.583)
O4': (20.820,151.147,68.205)
C5': (21.214,153.155,66.913)
P: (19.282,154.965,66.880)
C4': (20.967,151.663,66.849)
C2': (18.672,151.148,67.231)
O2': (17.604,150.271,66.924)
N1: (19.010,150.987,69.698)
O4: (17.417,152.075,73.225)
O2: (17.681,149.099,69.821)
C6: (19.423,152.154,70.309)
C5: (18.949,152.562,71.487)
O3': (19.884,149.968,65.530)
OP1: (17.834,150.452,64.142)
OP2: (18.725,148.063,64.473)
C3': (22.437,152.172,61.476)
C1': (21.593,151.328,59.445)
C5': (20.697,150.973,62.889)
O4': (20.988,150.604,60.509)
C8: (19.448,152.706,59.523)
O2': (23.962,151.199,59.843)
C6: (19.495,154.708,56.642)
C5: (19.613,153.840,57.738)
C4: (20.721,153.014,57.769)
P: (18.984,149.522,64.279)
C4': (21.689,150.877,61.751)
C2': (22.833,152.021,60.018)
C2: (21.472,153.809,55.861)
N1: (20.460,154.665,55.699)
N3: (21.699,152.947,56.851)
N6: (18.492,155.571,56.490)
N7: (18.814,153.630,58.849)
N9: (20.620,152.298,58.936)
O5': (19.954,149.742,63.030)
O3': (23.562,152.321,62.329)
OP2: (18.725,148.063,64.473)
C3': (22.437,152.172,61.476)
C1': (21.593,151.328,59.445)
C5': (20.697,150.973,62.889)
O4': (20.988,150.604,60.509)
C8: (19.448,152.706,59.523)
O2': (23.962,151.199,59.843)
C6: (19.495,154.708,56.642)
C5: (19.613,153.840,57.738)
C4: (20.721,153.014,57.769)
P: (18.984,149.522,64.279)
C4': (21.689,150.877,61.751)
C2': (22.833,152.021,60.018)
C2: (21.472,153.809,55.861)
N1: (20.460,154.665,55.699)
N3: (21.699,152.947,56.851)
N6: (18.492,155.571,56.490)
N7: (18.814,153.630,58.849)
N9: (20.620,152.298,58.936)
O5': (19.954,149.742,63.030)
O3': (23.562,152.321,62.329)
Image (generated by PyMOL):