ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01259:01289

Extra

PDB:
ATOM 1 O3' G A1258 21.183 101.687 64.667 1.00 46.98 O
ATOM 2 P G A1259 21.435 103.025 63.795 1.00 49.29 P
ATOM 3 OP1 G A1259 20.256 103.198 62.903 1.00 51.48 O
ATOM 4 OP2 G A1259 22.796 102.975 63.199 1.00 48.26 O
ATOM 5 O5' G A1259 21.366 104.219 64.851 1.00 46.65 O
ATOM 6 C5' G A1259 20.102 104.629 65.394 1.00 44.67 C
ATOM 7 C4' G A1259 20.282 105.671 66.478 1.00 44.46 C
ATOM 8 O4' G A1259 21.325 105.240 67.396 1.00 44.01 O
ATOM 9 C3' G A1259 20.712 107.081 66.098 1.00 42.24 C
ATOM 10 O3' G A1259 19.631 107.870 65.594 1.00 43.99 O
ATOM 11 C2' G A1259 21.190 107.603 67.449 1.00 41.58 C
ATOM 12 O2' G A1259 20.120 107.896 68.329 1.00 37.36 O
ATOM 13 C1' G A1259 21.938 106.380 67.988 1.00 41.69 C
ATOM 14 N9 G A1259 23.357 106.394 67.633 1.00 39.36 N
ATOM 15 C8 G A1259 24.014 105.517 66.809 1.00 38.47 C
ATOM 16 N7 G A1259 25.266 105.827 66.624 1.00 38.15 N
ATOM 17 C5 G A1259 25.453 106.972 67.380 1.00 37.31 C
ATOM 18 C6 G A1259 26.598 107.784 67.536 1.00 36.10 C
ATOM 19 O6 G A1259 27.691 107.659 67.007 1.00 34.76 O
ATOM 20 N1 G A1259 26.364 108.846 68.399 1.00 36.90 N
ATOM 21 C2 G A1259 25.165 109.103 69.019 1.00 39.60 C
ATOM 22 N2 G A1259 25.125 110.173 69.817 1.00 38.43 N
ATOM 23 N3 G A1259 24.077 108.361 68.863 1.00 40.04 N
ATOM 24 C4 G A1259 24.293 107.320 68.033 1.00 38.51 C
ATOM 25 P C A1260 19.936 109.207 64.735 1.00 47.21 P
ATOM 26 OP1 C A1260 18.658 109.718 64.176 1.00 47.42 O
ATOM 27 OP2 C A1260 21.077 108.927 63.821 1.00 48.08 O
ATOM 28 O5' C A1260 20.431 110.278 65.803 1.00 43.48 O
TER

ATOM 1 O3' G B1288 21.342 114.567 77.236 1.00 38.97 O
ATOM 2 P A B1289 21.309 115.925 76.387 1.00 39.55 P
ATOM 3 OP1 A B1289 22.063 116.941 77.168 1.00 38.69 O
ATOM 4 OP2 A B1289 19.898 116.195 76.021 1.00 39.12 O
ATOM 5 O5' A B1289 22.129 115.562 75.069 1.00 37.71 O
ATOM 6 C5' A B1289 23.557 115.704 75.031 1.00 36.67 C
ATOM 7 C4' A B1289 24.120 114.989 73.839 1.00 35.97 C
ATOM 8 O4' A B1289 23.531 113.675 73.809 1.00 36.03 O
ATOM 9 C3' A B1289 23.791 115.571 72.475 1.00 35.72 C
ATOM 10 O3' A B1289 24.753 116.537 72.080 1.00 36.46 O
ATOM 11 C2' A B1289 23.945 114.358 71.572 1.00 38.07 C
ATOM 12 O2' A B1289 25.295 114.073 71.262 1.00 39.64 O
ATOM 13 C1' A B1289 23.414 113.241 72.468 1.00 37.65 C
ATOM 14 N9 A B1289 22.024 112.878 72.204 1.00 37.91 N
ATOM 15 C8 A B1289 20.885 113.576 72.508 1.00 37.94 C
ATOM 16 N7 A B1289 19.784 112.975 72.132 1.00 39.84 N
ATOM 17 C5 A B1289 20.230 111.797 71.542 1.00 40.32 C
ATOM 18 C6 A B1289 19.550 110.712 70.940 1.00 41.86 C
ATOM 19 N6 A B1289 18.221 110.651 70.801 1.00 42.84 N
ATOM 20 N1 A B1289 20.295 109.684 70.470 1.00 41.83 N
ATOM 21 C2 A B1289 21.625 109.758 70.581 1.00 41.80 C
ATOM 22 N3 A B1289 22.375 110.727 71.108 1.00 42.38 N
ATOM 23 C4 A B1289 21.606 111.726 71.581 1.00 39.43 C
ATOM 24 P G B1290 24.422 118.103 72.194 1.00 42.61 P
ATOM 25 OP1 G B1290 25.350 118.826 71.294 1.00 42.93 O
ATOM 26 OP2 G B1290 24.378 118.446 73.619 1.00 43.51 O
ATOM 27 O5' G B1290 22.936 118.281 71.643 1.00 46.85 O
TER

Atoms:
OP1: (20.256,103.198,62.903)
OP2: (22.796,102.975,63.199)
C3': (20.712,107.081,66.098)
C1': (21.938,106.380,67.988)
C5': (20.102,104.629,65.394)
O6: (27.691,107.659,67.007)
O4': (21.325,105.240,67.396)
C8: (24.014,105.517,66.809)
C2: (25.165,109.103,69.019)
C6: (26.598,107.784,67.536)
C5: (25.453,106.972,67.380)
C4: (24.293,107.320,68.033)
P: (21.435,103.025,63.795)
C4': (20.282,105.671,66.478)
C2': (21.190,107.603,67.449)
O2': (20.120,107.896,68.329)
N1: (26.364,108.846,68.399)
N2: (25.125,110.173,69.817)
N3: (24.077,108.361,68.863)
N7: (25.266,105.827,66.624)
N9: (23.357,106.394,67.633)
O5': (21.366,104.219,64.851)
O3': (19.631,107.870,65.594)
OP1: (22.063,116.941,77.168)
OP2: (19.898,116.195,76.021)
C3': (23.791,115.571,72.475)
C1': (23.414,113.241,72.468)
C5': (23.557,115.704,75.031)
O4': (23.531,113.675,73.809)
C8: (20.885,113.576,72.508)
O2': (25.295,114.073,71.262)
C6: (19.550,110.712,70.940)
C5: (20.230,111.797,71.542)
C4: (21.606,111.726,71.581)
P: (21.309,115.925,76.387)
C4': (24.120,114.989,73.839)
C2': (23.945,114.358,71.572)
C2: (21.625,109.758,70.581)
N1: (20.295,109.684,70.470)
N3: (22.375,110.727,71.108)
N6: (18.221,110.651,70.801)
N7: (19.784,112.975,72.132)
N9: (22.024,112.878,72.204)
O5': (22.129,115.562,75.069)
O3': (24.753,116.537,72.080)
Image (generated by PyMOL):
PyMOL image
show in jmol