Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0498:0499
Extra
PDB:
ATOM 1 O3' A A 497 19.606 154.631 65.169 1.00 65.26 O
ATOM 2 P U A 498 19.346 154.849 66.737 1.00 66.59 P
ATOM 3 OP1 U A 498 17.903 154.607 66.987 1.00 66.85 O
ATOM 4 OP2 U A 498 19.949 156.141 67.125 1.00 67.09 O
ATOM 5 O5' U A 498 20.158 153.680 67.450 1.00 70.76 O
ATOM 6 C5' U A 498 21.280 153.039 66.812 1.00 77.52 C
ATOM 7 C4' U A 498 21.071 151.539 66.776 1.00 81.58 C
ATOM 8 O4' U A 498 21.033 151.019 68.137 1.00 85.54 O
ATOM 9 C3' U A 498 19.778 151.081 66.116 1.00 81.92 C
ATOM 10 O3' U A 498 19.958 149.833 65.477 1.00 78.89 O
ATOM 11 C2' U A 498 18.817 150.938 67.291 1.00 84.72 C
ATOM 12 O2' U A 498 17.798 149.984 67.043 1.00 84.53 O
ATOM 13 C1' U A 498 19.748 150.478 68.419 1.00 87.91 C
ATOM 14 N1 U A 498 19.303 150.993 69.730 1.00 91.16 N
ATOM 15 C2 U A 498 18.554 150.157 70.557 1.00 92.62 C
ATOM 16 O2 U A 498 18.288 148.992 70.282 1.00 93.36 O
ATOM 17 N3 U A 498 18.127 150.741 71.725 1.00 93.06 N
ATOM 18 C4 U A 498 18.366 152.034 72.153 1.00 92.49 C
ATOM 19 O4 U A 498 17.836 152.437 73.189 1.00 93.61 O
ATOM 20 C5 U A 498 19.167 152.815 71.269 1.00 91.33 C
ATOM 21 C6 U A 498 19.598 152.287 70.122 1.00 91.29 C
ATOM 22 P A A 499 19.052 149.462 64.206 1.00 77.24 P
ATOM 23 OP1 A A 499 17.909 150.408 64.141 1.00 76.55 O
ATOM 24 OP2 A A 499 18.789 147.998 64.310 1.00 78.38 O
ATOM 25 O5' A A 499 20.007 149.753 62.960 1.00 71.62 O
TER
ATOM 1 O3' U B 498 19.958 149.833 65.477 1.00 78.89 O
ATOM 2 P A B 499 19.052 149.462 64.206 1.00 77.24 P
ATOM 3 OP1 A B 499 17.909 150.408 64.141 1.00 76.55 O
ATOM 4 OP2 A B 499 18.789 147.998 64.310 1.00 78.38 O
ATOM 5 O5' A B 499 20.007 149.753 62.960 1.00 71.62 O
ATOM 6 C5' A B 499 20.736 150.991 62.863 1.00 63.62 C
ATOM 7 C4' A B 499 21.705 150.945 61.704 1.00 59.15 C
ATOM 8 O4' A B 499 20.979 150.724 60.467 1.00 57.68 O
ATOM 9 C3' A B 499 22.464 152.237 61.451 1.00 56.60 C
ATOM 10 O3' A B 499 23.604 152.343 62.292 1.00 54.80 O
ATOM 11 C2' A B 499 22.853 152.098 59.990 1.00 55.27 C
ATOM 12 O2' A B 499 23.941 151.227 59.819 1.00 56.04 O
ATOM 13 C1' A B 499 21.601 151.442 59.411 1.00 55.15 C
ATOM 14 N9 A B 499 20.656 152.433 58.896 1.00 53.36 N
ATOM 15 C8 A B 499 19.503 152.898 59.476 1.00 53.01 C
ATOM 16 N7 A B 499 18.894 153.820 58.776 1.00 52.05 N
ATOM 17 C5 A B 499 19.692 153.967 57.653 1.00 52.68 C
ATOM 18 C6 A B 499 19.596 154.799 56.524 1.00 52.36 C
ATOM 19 N6 A B 499 18.611 155.671 56.330 1.00 52.17 N
ATOM 20 N1 A B 499 20.562 154.703 55.589 1.00 52.61 N
ATOM 21 C2 A B 499 21.550 153.827 55.780 1.00 53.80 C
ATOM 22 N3 A B 499 21.751 152.989 56.795 1.00 54.04 N
ATOM 23 C4 A B 499 20.776 153.112 57.710 1.00 53.13 C
ATOM 24 P G B 500 23.829 153.668 63.162 1.00 51.13 P
ATOM 25 OP1 G B 500 24.999 153.416 64.028 1.00 51.51 O
ATOM 26 OP2 G B 500 22.545 154.068 63.775 1.00 51.31 O
ATOM 27 O5' G B 500 24.208 154.762 62.076 1.00 52.16 O
TER
ATOM 2 P U A 498 19.346 154.849 66.737 1.00 66.59 P
ATOM 3 OP1 U A 498 17.903 154.607 66.987 1.00 66.85 O
ATOM 4 OP2 U A 498 19.949 156.141 67.125 1.00 67.09 O
ATOM 5 O5' U A 498 20.158 153.680 67.450 1.00 70.76 O
ATOM 6 C5' U A 498 21.280 153.039 66.812 1.00 77.52 C
ATOM 7 C4' U A 498 21.071 151.539 66.776 1.00 81.58 C
ATOM 8 O4' U A 498 21.033 151.019 68.137 1.00 85.54 O
ATOM 9 C3' U A 498 19.778 151.081 66.116 1.00 81.92 C
ATOM 10 O3' U A 498 19.958 149.833 65.477 1.00 78.89 O
ATOM 11 C2' U A 498 18.817 150.938 67.291 1.00 84.72 C
ATOM 12 O2' U A 498 17.798 149.984 67.043 1.00 84.53 O
ATOM 13 C1' U A 498 19.748 150.478 68.419 1.00 87.91 C
ATOM 14 N1 U A 498 19.303 150.993 69.730 1.00 91.16 N
ATOM 15 C2 U A 498 18.554 150.157 70.557 1.00 92.62 C
ATOM 16 O2 U A 498 18.288 148.992 70.282 1.00 93.36 O
ATOM 17 N3 U A 498 18.127 150.741 71.725 1.00 93.06 N
ATOM 18 C4 U A 498 18.366 152.034 72.153 1.00 92.49 C
ATOM 19 O4 U A 498 17.836 152.437 73.189 1.00 93.61 O
ATOM 20 C5 U A 498 19.167 152.815 71.269 1.00 91.33 C
ATOM 21 C6 U A 498 19.598 152.287 70.122 1.00 91.29 C
ATOM 22 P A A 499 19.052 149.462 64.206 1.00 77.24 P
ATOM 23 OP1 A A 499 17.909 150.408 64.141 1.00 76.55 O
ATOM 24 OP2 A A 499 18.789 147.998 64.310 1.00 78.38 O
ATOM 25 O5' A A 499 20.007 149.753 62.960 1.00 71.62 O
TER
ATOM 1 O3' U B 498 19.958 149.833 65.477 1.00 78.89 O
ATOM 2 P A B 499 19.052 149.462 64.206 1.00 77.24 P
ATOM 3 OP1 A B 499 17.909 150.408 64.141 1.00 76.55 O
ATOM 4 OP2 A B 499 18.789 147.998 64.310 1.00 78.38 O
ATOM 5 O5' A B 499 20.007 149.753 62.960 1.00 71.62 O
ATOM 6 C5' A B 499 20.736 150.991 62.863 1.00 63.62 C
ATOM 7 C4' A B 499 21.705 150.945 61.704 1.00 59.15 C
ATOM 8 O4' A B 499 20.979 150.724 60.467 1.00 57.68 O
ATOM 9 C3' A B 499 22.464 152.237 61.451 1.00 56.60 C
ATOM 10 O3' A B 499 23.604 152.343 62.292 1.00 54.80 O
ATOM 11 C2' A B 499 22.853 152.098 59.990 1.00 55.27 C
ATOM 12 O2' A B 499 23.941 151.227 59.819 1.00 56.04 O
ATOM 13 C1' A B 499 21.601 151.442 59.411 1.00 55.15 C
ATOM 14 N9 A B 499 20.656 152.433 58.896 1.00 53.36 N
ATOM 15 C8 A B 499 19.503 152.898 59.476 1.00 53.01 C
ATOM 16 N7 A B 499 18.894 153.820 58.776 1.00 52.05 N
ATOM 17 C5 A B 499 19.692 153.967 57.653 1.00 52.68 C
ATOM 18 C6 A B 499 19.596 154.799 56.524 1.00 52.36 C
ATOM 19 N6 A B 499 18.611 155.671 56.330 1.00 52.17 N
ATOM 20 N1 A B 499 20.562 154.703 55.589 1.00 52.61 N
ATOM 21 C2 A B 499 21.550 153.827 55.780 1.00 53.80 C
ATOM 22 N3 A B 499 21.751 152.989 56.795 1.00 54.04 N
ATOM 23 C4 A B 499 20.776 153.112 57.710 1.00 53.13 C
ATOM 24 P G B 500 23.829 153.668 63.162 1.00 51.13 P
ATOM 25 OP1 G B 500 24.999 153.416 64.028 1.00 51.51 O
ATOM 26 OP2 G B 500 22.545 154.068 63.775 1.00 51.31 O
ATOM 27 O5' G B 500 24.208 154.762 62.076 1.00 52.16 O
TER
Atoms:
C4: (18.366,152.034,72.153)
N3: (18.127,150.741,71.725)
OP1: (17.903,154.607,66.987)
OP2: (19.949,156.141,67.125)
C2: (18.554,150.157,70.557)
C1': (19.748,150.478,68.419)
C3': (19.778,151.081,66.116)
O5': (20.158,153.680,67.450)
O4': (21.033,151.019,68.137)
C5': (21.280,153.039,66.812)
P: (19.346,154.849,66.737)
C4': (21.071,151.539,66.776)
C2': (18.817,150.938,67.291)
O2': (17.798,149.984,67.043)
N1: (19.303,150.993,69.730)
O4: (17.836,152.437,73.189)
O2: (18.288,148.992,70.282)
C6: (19.598,152.287,70.122)
C5: (19.167,152.815,71.269)
O3': (19.958,149.833,65.477)
N3: (18.127,150.741,71.725)
OP1: (17.903,154.607,66.987)
OP2: (19.949,156.141,67.125)
C2: (18.554,150.157,70.557)
C1': (19.748,150.478,68.419)
C3': (19.778,151.081,66.116)
O5': (20.158,153.680,67.450)
O4': (21.033,151.019,68.137)
C5': (21.280,153.039,66.812)
P: (19.346,154.849,66.737)
C4': (21.071,151.539,66.776)
C2': (18.817,150.938,67.291)
O2': (17.798,149.984,67.043)
N1: (19.303,150.993,69.730)
O4: (17.836,152.437,73.189)
O2: (18.288,148.992,70.282)
C6: (19.598,152.287,70.122)
C5: (19.167,152.815,71.269)
O3': (19.958,149.833,65.477)
OP1: (17.909,150.408,64.141)
OP2: (18.789,147.998,64.310)
C3': (22.464,152.237,61.451)
C1': (21.601,151.442,59.411)
C5': (20.736,150.991,62.863)
O4': (20.979,150.724,60.467)
C8: (19.503,152.898,59.476)
O2': (23.941,151.227,59.819)
C6: (19.596,154.799,56.524)
C5: (19.692,153.967,57.653)
C4: (20.776,153.112,57.710)
P: (19.052,149.462,64.206)
C4': (21.705,150.945,61.704)
C2': (22.853,152.098,59.990)
C2: (21.550,153.827,55.780)
N1: (20.562,154.703,55.589)
N3: (21.751,152.989,56.795)
N6: (18.611,155.671,56.330)
N7: (18.894,153.820,58.776)
N9: (20.656,152.433,58.896)
O5': (20.007,149.753,62.960)
O3': (23.604,152.343,62.292)
OP2: (18.789,147.998,64.310)
C3': (22.464,152.237,61.451)
C1': (21.601,151.442,59.411)
C5': (20.736,150.991,62.863)
O4': (20.979,150.724,60.467)
C8: (19.503,152.898,59.476)
O2': (23.941,151.227,59.819)
C6: (19.596,154.799,56.524)
C5: (19.692,153.967,57.653)
C4: (20.776,153.112,57.710)
P: (19.052,149.462,64.206)
C4': (21.705,150.945,61.704)
C2': (22.853,152.098,59.990)
C2: (21.550,153.827,55.780)
N1: (20.562,154.703,55.589)
N3: (21.751,152.989,56.795)
N6: (18.611,155.671,56.330)
N7: (18.894,153.820,58.776)
N9: (20.656,152.433,58.896)
O5': (20.007,149.753,62.960)
O3': (23.604,152.343,62.292)
Image (generated by PyMOL):