Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:02501:0520
Extra
PDB:
ATOM 1 O3' U A2500 30.476 155.547 110.205 1.00 45.83 O
ATOM 2 P G A2501 28.940 155.626 110.675 1.00 49.06 P
ATOM 3 OP1 G A2501 28.400 156.794 109.923 1.00 48.00 O
ATOM 4 OP2 G A2501 28.830 155.582 112.168 1.00 41.80 O
ATOM 5 O5' G A2501 28.311 154.293 110.072 1.00 45.22 O
ATOM 6 C5' G A2501 27.282 153.588 110.755 1.00 41.19 C
ATOM 7 C4' G A2501 26.983 152.307 110.027 1.00 39.97 C
ATOM 8 O4' G A2501 28.160 151.454 110.025 1.00 39.20 O
ATOM 9 C3' G A2501 25.902 151.458 110.667 1.00 40.03 C
ATOM 10 O3' G A2501 24.619 151.933 110.258 1.00 40.78 O
ATOM 11 C2' G A2501 26.236 150.077 110.119 1.00 37.09 C
ATOM 12 O2' G A2501 25.857 149.988 108.764 1.00 36.81 O
ATOM 13 C1' G A2501 27.767 150.095 110.185 1.00 37.35 C
ATOM 14 N9 G A2501 28.290 149.618 111.466 1.00 34.31 N
ATOM 15 C8 G A2501 28.868 150.378 112.455 1.00 33.13 C
ATOM 16 N7 G A2501 29.204 149.679 113.506 1.00 33.61 N
ATOM 17 C5 G A2501 28.832 148.380 113.189 1.00 32.26 C
ATOM 18 C6 G A2501 28.927 147.191 113.950 1.00 32.80 C
ATOM 19 O6 G A2501 29.391 147.038 115.093 1.00 34.19 O
ATOM 20 N1 G A2501 28.415 146.101 113.257 1.00 32.30 N
ATOM 21 C2 G A2501 27.900 146.146 111.987 1.00 31.29 C
ATOM 22 N2 G A2501 27.491 144.978 111.466 1.00 30.17 N
ATOM 23 N3 G A2501 27.802 147.249 111.273 1.00 33.31 N
ATOM 24 C4 G A2501 28.280 148.322 111.932 1.00 32.28 C
ATOM 25 P U A2502 23.414 152.015 111.321 1.00 40.41 P
ATOM 26 OP1 U A2502 22.321 152.766 110.649 1.00 39.95 O
ATOM 27 OP2 U A2502 23.949 152.495 112.624 1.00 38.17 O
ATOM 28 O5' U A2502 22.943 150.501 111.479 1.00 38.00 O
TER
ATOM 1 O3' G B 519 20.908 138.324 107.260 1.00 45.27 O
ATOM 2 P A B 520 20.697 139.483 108.360 1.00 44.07 P
ATOM 3 OP1 A B 520 20.331 138.795 109.629 1.00 45.16 O
ATOM 4 OP2 A B 520 19.801 140.533 107.814 1.00 41.72 O
ATOM 5 O5' A B 520 22.144 140.131 108.519 1.00 43.09 O
ATOM 6 C5' A B 520 23.316 139.325 108.763 1.00 40.52 C
ATOM 7 C4' A B 520 24.452 140.204 109.244 1.00 40.56 C
ATOM 8 O4' A B 520 24.646 141.279 108.289 1.00 41.35 O
ATOM 9 C3' A B 520 24.200 140.938 110.556 1.00 40.11 C
ATOM 10 O3' A B 520 24.602 140.118 111.643 1.00 40.56 O
ATOM 11 C2' A B 520 25.152 142.127 110.465 1.00 40.40 C
ATOM 12 O2' A B 520 26.466 141.791 110.863 1.00 41.50 O
ATOM 13 C1' A B 520 25.150 142.419 108.963 1.00 39.85 C
ATOM 14 N9 A B 520 24.374 143.584 108.554 1.00 39.18 N
ATOM 15 C8 A B 520 23.066 143.628 108.141 1.00 39.69 C
ATOM 16 N7 A B 520 22.660 144.829 107.804 1.00 40.18 N
ATOM 17 C5 A B 520 23.775 145.629 108.011 1.00 40.40 C
ATOM 18 C6 A B 520 24.003 147.001 107.820 1.00 40.17 C
ATOM 19 N6 A B 520 23.086 147.845 107.344 1.00 42.01 N
ATOM 20 N1 A B 520 25.225 147.484 108.130 1.00 38.63 N
ATOM 21 C2 A B 520 26.149 146.639 108.593 1.00 37.93 C
ATOM 22 N3 A B 520 26.060 145.331 108.806 1.00 39.73 N
ATOM 23 C4 A B 520 24.833 144.879 108.489 1.00 39.95 C
ATOM 24 P U B 521 23.519 139.565 112.683 1.00 38.07 P
ATOM 25 OP1 U B 521 22.274 139.222 111.968 1.00 41.93 O
ATOM 26 OP2 U B 521 23.477 140.517 113.813 1.00 40.32 O
ATOM 27 O5' U B 521 24.163 138.194 113.171 1.00 40.72 O
TER
ATOM 2 P G A2501 28.940 155.626 110.675 1.00 49.06 P
ATOM 3 OP1 G A2501 28.400 156.794 109.923 1.00 48.00 O
ATOM 4 OP2 G A2501 28.830 155.582 112.168 1.00 41.80 O
ATOM 5 O5' G A2501 28.311 154.293 110.072 1.00 45.22 O
ATOM 6 C5' G A2501 27.282 153.588 110.755 1.00 41.19 C
ATOM 7 C4' G A2501 26.983 152.307 110.027 1.00 39.97 C
ATOM 8 O4' G A2501 28.160 151.454 110.025 1.00 39.20 O
ATOM 9 C3' G A2501 25.902 151.458 110.667 1.00 40.03 C
ATOM 10 O3' G A2501 24.619 151.933 110.258 1.00 40.78 O
ATOM 11 C2' G A2501 26.236 150.077 110.119 1.00 37.09 C
ATOM 12 O2' G A2501 25.857 149.988 108.764 1.00 36.81 O
ATOM 13 C1' G A2501 27.767 150.095 110.185 1.00 37.35 C
ATOM 14 N9 G A2501 28.290 149.618 111.466 1.00 34.31 N
ATOM 15 C8 G A2501 28.868 150.378 112.455 1.00 33.13 C
ATOM 16 N7 G A2501 29.204 149.679 113.506 1.00 33.61 N
ATOM 17 C5 G A2501 28.832 148.380 113.189 1.00 32.26 C
ATOM 18 C6 G A2501 28.927 147.191 113.950 1.00 32.80 C
ATOM 19 O6 G A2501 29.391 147.038 115.093 1.00 34.19 O
ATOM 20 N1 G A2501 28.415 146.101 113.257 1.00 32.30 N
ATOM 21 C2 G A2501 27.900 146.146 111.987 1.00 31.29 C
ATOM 22 N2 G A2501 27.491 144.978 111.466 1.00 30.17 N
ATOM 23 N3 G A2501 27.802 147.249 111.273 1.00 33.31 N
ATOM 24 C4 G A2501 28.280 148.322 111.932 1.00 32.28 C
ATOM 25 P U A2502 23.414 152.015 111.321 1.00 40.41 P
ATOM 26 OP1 U A2502 22.321 152.766 110.649 1.00 39.95 O
ATOM 27 OP2 U A2502 23.949 152.495 112.624 1.00 38.17 O
ATOM 28 O5' U A2502 22.943 150.501 111.479 1.00 38.00 O
TER
ATOM 1 O3' G B 519 20.908 138.324 107.260 1.00 45.27 O
ATOM 2 P A B 520 20.697 139.483 108.360 1.00 44.07 P
ATOM 3 OP1 A B 520 20.331 138.795 109.629 1.00 45.16 O
ATOM 4 OP2 A B 520 19.801 140.533 107.814 1.00 41.72 O
ATOM 5 O5' A B 520 22.144 140.131 108.519 1.00 43.09 O
ATOM 6 C5' A B 520 23.316 139.325 108.763 1.00 40.52 C
ATOM 7 C4' A B 520 24.452 140.204 109.244 1.00 40.56 C
ATOM 8 O4' A B 520 24.646 141.279 108.289 1.00 41.35 O
ATOM 9 C3' A B 520 24.200 140.938 110.556 1.00 40.11 C
ATOM 10 O3' A B 520 24.602 140.118 111.643 1.00 40.56 O
ATOM 11 C2' A B 520 25.152 142.127 110.465 1.00 40.40 C
ATOM 12 O2' A B 520 26.466 141.791 110.863 1.00 41.50 O
ATOM 13 C1' A B 520 25.150 142.419 108.963 1.00 39.85 C
ATOM 14 N9 A B 520 24.374 143.584 108.554 1.00 39.18 N
ATOM 15 C8 A B 520 23.066 143.628 108.141 1.00 39.69 C
ATOM 16 N7 A B 520 22.660 144.829 107.804 1.00 40.18 N
ATOM 17 C5 A B 520 23.775 145.629 108.011 1.00 40.40 C
ATOM 18 C6 A B 520 24.003 147.001 107.820 1.00 40.17 C
ATOM 19 N6 A B 520 23.086 147.845 107.344 1.00 42.01 N
ATOM 20 N1 A B 520 25.225 147.484 108.130 1.00 38.63 N
ATOM 21 C2 A B 520 26.149 146.639 108.593 1.00 37.93 C
ATOM 22 N3 A B 520 26.060 145.331 108.806 1.00 39.73 N
ATOM 23 C4 A B 520 24.833 144.879 108.489 1.00 39.95 C
ATOM 24 P U B 521 23.519 139.565 112.683 1.00 38.07 P
ATOM 25 OP1 U B 521 22.274 139.222 111.968 1.00 41.93 O
ATOM 26 OP2 U B 521 23.477 140.517 113.813 1.00 40.32 O
ATOM 27 O5' U B 521 24.163 138.194 113.171 1.00 40.72 O
TER
Atoms:
OP1: (28.400,156.794,109.923)
OP2: (28.830,155.582,112.168)
C3': (25.902,151.458,110.667)
C1': (27.767,150.095,110.185)
C5': (27.282,153.588,110.755)
O6: (29.391,147.038,115.093)
O4': (28.160,151.454,110.025)
C8: (28.868,150.378,112.455)
C2: (27.900,146.146,111.987)
C6: (28.927,147.191,113.950)
C5: (28.832,148.380,113.189)
C4: (28.280,148.322,111.932)
P: (28.940,155.626,110.675)
C4': (26.983,152.307,110.027)
C2': (26.236,150.077,110.119)
O2': (25.857,149.988,108.764)
N1: (28.415,146.101,113.257)
N2: (27.491,144.978,111.466)
N3: (27.802,147.249,111.273)
N7: (29.204,149.679,113.506)
N9: (28.290,149.618,111.466)
O5': (28.311,154.293,110.072)
O3': (24.619,151.933,110.258)
OP2: (28.830,155.582,112.168)
C3': (25.902,151.458,110.667)
C1': (27.767,150.095,110.185)
C5': (27.282,153.588,110.755)
O6: (29.391,147.038,115.093)
O4': (28.160,151.454,110.025)
C8: (28.868,150.378,112.455)
C2: (27.900,146.146,111.987)
C6: (28.927,147.191,113.950)
C5: (28.832,148.380,113.189)
C4: (28.280,148.322,111.932)
P: (28.940,155.626,110.675)
C4': (26.983,152.307,110.027)
C2': (26.236,150.077,110.119)
O2': (25.857,149.988,108.764)
N1: (28.415,146.101,113.257)
N2: (27.491,144.978,111.466)
N3: (27.802,147.249,111.273)
N7: (29.204,149.679,113.506)
N9: (28.290,149.618,111.466)
O5': (28.311,154.293,110.072)
O3': (24.619,151.933,110.258)
OP1: (20.331,138.795,109.629)
OP2: (19.801,140.533,107.814)
C3': (24.200,140.938,110.556)
C1': (25.150,142.419,108.963)
C5': (23.316,139.325,108.763)
O4': (24.646,141.279,108.289)
C8: (23.066,143.628,108.141)
O2': (26.466,141.791,110.863)
C6: (24.003,147.001,107.820)
C5: (23.775,145.629,108.011)
C4: (24.833,144.879,108.489)
P: (20.697,139.483,108.360)
C4': (24.452,140.204,109.244)
C2': (25.152,142.127,110.465)
C2: (26.149,146.639,108.593)
N1: (25.225,147.484,108.130)
N3: (26.060,145.331,108.806)
N6: (23.086,147.845,107.344)
N7: (22.660,144.829,107.804)
N9: (24.374,143.584,108.554)
O5': (22.144,140.131,108.519)
O3': (24.602,140.118,111.643)
OP2: (19.801,140.533,107.814)
C3': (24.200,140.938,110.556)
C1': (25.150,142.419,108.963)
C5': (23.316,139.325,108.763)
O4': (24.646,141.279,108.289)
C8: (23.066,143.628,108.141)
O2': (26.466,141.791,110.863)
C6: (24.003,147.001,107.820)
C5: (23.775,145.629,108.011)
C4: (24.833,144.879,108.489)
P: (20.697,139.483,108.360)
C4': (24.452,140.204,109.244)
C2': (25.152,142.127,110.465)
C2: (26.149,146.639,108.593)
N1: (25.225,147.484,108.130)
N3: (26.060,145.331,108.806)
N6: (23.086,147.845,107.344)
N7: (22.660,144.829,107.804)
N9: (24.374,143.584,108.554)
O5': (22.144,140.131,108.519)
O3': (24.602,140.118,111.643)
Image (generated by PyMOL):