ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1JJ2:0498:0499

Extra

PDB:
ATOM 1 O3' A A 497 19.295 154.336 65.266 1.00 54.14 O
ATOM 2 P U A 498 19.117 154.503 66.856 1.00 56.41 P
ATOM 3 OP1 U A 498 17.671 154.514 67.185 1.00 56.56 O
ATOM 4 OP2 U A 498 19.975 155.617 67.315 1.00 56.44 O
ATOM 5 O5' U A 498 19.729 153.150 67.424 1.00 60.93 O
ATOM 6 C5' U A 498 20.768 152.443 66.708 1.00 66.34 C
ATOM 7 C4' U A 498 20.435 150.968 66.627 1.00 69.49 C
ATOM 8 O4' U A 498 20.335 150.435 67.978 1.00 72.70 O
ATOM 9 C3' U A 498 19.112 150.630 65.948 1.00 69.80 C
ATOM 10 O3' U A 498 19.202 149.345 65.352 1.00 66.40 O
ATOM 11 C2' U A 498 18.137 150.583 67.119 1.00 72.97 C
ATOM 12 O2' U A 498 17.010 149.763 66.862 1.00 74.36 O
ATOM 13 C1' U A 498 19.013 149.985 68.223 1.00 75.37 C
ATOM 14 N1 U A 498 18.615 150.422 69.574 1.00 78.57 N
ATOM 15 C2 U A 498 17.823 149.565 70.336 1.00 80.28 C
ATOM 16 O2 U A 498 17.466 148.454 69.953 1.00 80.30 O
ATOM 17 N3 U A 498 17.460 150.060 71.567 1.00 80.89 N
ATOM 18 C4 U A 498 17.795 151.288 72.107 1.00 80.01 C
ATOM 19 O4 U A 498 17.325 151.614 73.196 1.00 80.67 O
ATOM 20 C5 U A 498 18.626 152.102 71.274 1.00 79.20 C
ATOM 21 C6 U A 498 18.999 151.656 70.071 1.00 78.91 C
ATOM 22 P A A 499 18.501 149.070 63.933 1.00 66.26 P
ATOM 23 OP1 A A 499 17.499 150.135 63.652 1.00 66.29 O
ATOM 24 OP2 A A 499 18.068 147.643 63.952 1.00 67.52 O
ATOM 25 O5' A A 499 19.700 149.233 62.896 1.00 59.86 O
TER

ATOM 1 O3' U B 498 19.202 149.345 65.352 1.00 66.40 O
ATOM 2 P A B 499 18.501 149.070 63.933 1.00 66.26 P
ATOM 3 OP1 A B 499 17.499 150.135 63.652 1.00 66.29 O
ATOM 4 OP2 A B 499 18.068 147.643 63.952 1.00 67.52 O
ATOM 5 O5' A B 499 19.700 149.233 62.896 1.00 59.86 O
ATOM 6 C5' A B 499 20.496 150.432 62.880 1.00 50.56 C
ATOM 7 C4' A B 499 21.489 150.391 61.745 1.00 44.73 C
ATOM 8 O4' A B 499 20.800 150.157 60.486 1.00 41.44 O
ATOM 9 C3' A B 499 22.236 151.693 61.527 1.00 41.53 C
ATOM 10 O3' A B 499 23.329 151.821 62.433 1.00 39.24 O
ATOM 11 C2' A B 499 22.650 151.583 60.066 1.00 41.25 C
ATOM 12 O2' A B 499 23.766 150.747 59.853 1.00 41.61 O
ATOM 13 C1' A B 499 21.418 150.908 59.455 1.00 40.48 C
ATOM 14 N9 A B 499 20.445 151.870 58.932 1.00 39.25 N
ATOM 15 C8 A B 499 19.243 152.253 59.482 1.00 39.75 C
ATOM 16 N7 A B 499 18.609 153.168 58.789 1.00 38.88 N
ATOM 17 C5 A B 499 19.443 153.397 57.703 1.00 39.61 C
ATOM 18 C6 A B 499 19.341 154.257 56.594 1.00 38.18 C
ATOM 19 N6 A B 499 18.320 155.089 56.391 1.00 37.86 N
ATOM 20 N1 A B 499 20.341 154.236 55.689 1.00 37.25 N
ATOM 21 C2 A B 499 21.369 153.411 55.893 1.00 37.37 C
ATOM 22 N3 A B 499 21.582 152.558 56.893 1.00 38.80 N
ATOM 23 C4 A B 499 20.572 152.599 57.775 1.00 38.61 C
ATOM 24 P G B 500 23.490 153.164 63.306 1.00 39.02 P
ATOM 25 OP1 G B 500 24.597 152.952 64.270 1.00 39.18 O
ATOM 26 OP2 G B 500 22.161 153.600 63.812 1.00 39.54 O
ATOM 27 O5' G B 500 23.957 154.244 62.238 1.00 37.93 O
TER

Atoms:
C4: (17.795,151.288,72.107)
N3: (17.460,150.060,71.567)
OP1: (17.671,154.514,67.185)
OP2: (19.975,155.617,67.315)
C2: (17.823,149.565,70.336)
C1': (19.013,149.985,68.223)
C3': (19.112,150.630,65.948)
O5': (19.729,153.150,67.424)
O4': (20.335,150.435,67.978)
C5': (20.768,152.443,66.708)
P: (19.117,154.503,66.856)
C4': (20.435,150.968,66.627)
C2': (18.137,150.583,67.119)
O2': (17.010,149.763,66.862)
N1: (18.615,150.422,69.574)
O4: (17.325,151.614,73.196)
O2: (17.466,148.454,69.953)
C6: (18.999,151.656,70.071)
C5: (18.626,152.102,71.274)
O3': (19.202,149.345,65.352)
OP1: (17.499,150.135,63.652)
OP2: (18.068,147.643,63.952)
C3': (22.236,151.693,61.527)
C1': (21.418,150.908,59.455)
C5': (20.496,150.432,62.880)
O4': (20.800,150.157,60.486)
C8: (19.243,152.253,59.482)
O2': (23.766,150.747,59.853)
C6: (19.341,154.257,56.594)
C5: (19.443,153.397,57.703)
C4: (20.572,152.599,57.775)
P: (18.501,149.070,63.933)
C4': (21.489,150.391,61.745)
C2': (22.650,151.583,60.066)
C2: (21.369,153.411,55.893)
N1: (20.341,154.236,55.689)
N3: (21.582,152.558,56.893)
N6: (18.320,155.089,56.391)
N7: (18.609,153.168,58.789)
N9: (20.445,151.870,58.932)
O5': (19.700,149.233,62.896)
O3': (23.329,151.821,62.433)
Image (generated by PyMOL):
PyMOL image
show in jmol