ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1059:A1066

Extra

PDB:
ATOM 1 O3' G A1058 27.038 99.493 116.969 1.00 40.62 O
ATOM 2 P G A1059 26.673 99.380 118.527 1.00 42.97 P
ATOM 3 OP1 G A1059 27.764 100.040 119.269 1.00 43.65 O
ATOM 4 OP2 G A1059 26.338 97.961 118.811 1.00 42.42 O
ATOM 5 O5' G A1059 25.354 100.255 118.711 1.00 42.24 O
ATOM 6 C5' G A1059 25.420 101.693 118.672 1.00 41.53 C
ATOM 7 C4' G A1059 24.048 102.295 118.488 1.00 41.42 C
ATOM 8 O4' G A1059 23.356 101.529 117.474 1.00 40.53 O
ATOM 9 C3' G A1059 23.075 102.290 119.661 1.00 41.77 C
ATOM 10 O3' G A1059 23.331 103.373 120.549 1.00 40.32 O
ATOM 11 C2' G A1059 21.763 102.501 118.927 1.00 42.02 C
ATOM 12 O2' G A1059 21.649 103.841 118.481 1.00 41.85 O
ATOM 13 C1' G A1059 21.967 101.585 117.716 1.00 41.60 C
ATOM 14 N9 G A1059 21.472 100.230 117.947 1.00 41.09 N
ATOM 15 C8 G A1059 22.171 99.045 117.954 1.00 42.01 C
ATOM 16 N7 G A1059 21.412 98.005 118.188 1.00 44.40 N
ATOM 17 C5 G A1059 20.139 98.542 118.344 1.00 43.62 C
ATOM 18 C6 G A1059 18.886 97.911 118.604 1.00 43.04 C
ATOM 19 O6 G A1059 18.639 96.706 118.732 1.00 45.00 O
ATOM 20 N1 G A1059 17.859 98.843 118.704 1.00 42.58 N
ATOM 21 C2 G A1059 18.008 100.201 118.560 1.00 42.31 C
ATOM 22 N2 G A1059 16.903 100.953 118.716 1.00 40.96 N
ATOM 23 N3 G A1059 19.154 100.790 118.292 1.00 42.59 N
ATOM 24 C4 G A1059 20.168 99.911 118.203 1.00 42.51 C
ATOM 25 P U A1060 22.906 103.277 122.104 1.00 39.80 P
ATOM 26 OP1 U A1060 23.589 104.432 122.719 1.00 41.38 O
ATOM 27 OP2 U A1060 23.110 101.924 122.675 1.00 41.63 O
ATOM 28 O5' U A1060 21.338 103.531 122.138 1.00 41.25 O
TER

ATOM 1 O3' A B1065 12.598 108.450 116.857 1.00 36.76 O
ATOM 2 P A B1066 12.323 108.892 118.356 1.00 37.54 P
ATOM 3 OP1 A B1066 10.958 109.421 118.439 1.00 37.24 O
ATOM 4 OP2 A B1066 13.459 109.726 118.816 1.00 37.50 O
ATOM 5 O5' A B1066 12.350 107.486 119.081 1.00 39.22 O
ATOM 6 C5' A B1066 11.502 106.435 118.604 1.00 39.87 C
ATOM 7 C4' A B1066 12.124 105.104 118.884 1.00 41.53 C
ATOM 8 O4' A B1066 13.348 104.990 118.124 1.00 41.14 O
ATOM 9 C3' A B1066 12.549 104.926 120.328 1.00 42.27 C
ATOM 10 O3' A B1066 11.454 104.422 121.079 1.00 44.13 O
ATOM 11 C2' A B1066 13.660 103.891 120.210 1.00 42.99 C
ATOM 12 O2' A B1066 13.173 102.567 120.077 1.00 43.59 O
ATOM 13 C1' A B1066 14.316 104.306 118.892 1.00 42.02 C
ATOM 14 N9 A B1066 15.455 105.197 119.078 1.00 41.98 N
ATOM 15 C8 A B1066 15.493 106.433 119.666 1.00 40.73 C
ATOM 16 N7 A B1066 16.676 106.991 119.642 1.00 40.62 N
ATOM 17 C5 A B1066 17.471 106.060 118.996 1.00 39.87 C
ATOM 18 C6 A B1066 18.826 106.069 118.630 1.00 38.82 C
ATOM 19 N6 A B1066 19.648 107.096 118.852 1.00 36.65 N
ATOM 20 N1 A B1066 19.311 104.975 118.008 1.00 38.86 N
ATOM 21 C2 A B1066 18.478 103.953 117.763 1.00 39.06 C
ATOM 22 N3 A B1066 17.186 103.836 118.040 1.00 39.97 N
ATOM 23 C4 A B1066 16.737 104.940 118.662 1.00 40.72 C
ATOM 24 P G B1067 10.921 105.211 122.364 1.00 45.66 P
ATOM 25 OP1 G B1067 9.843 104.337 122.876 1.00 46.19 O
ATOM 26 OP2 G B1067 10.627 106.624 122.034 1.00 44.34 O
ATOM 27 O5' G B1067 12.140 105.172 123.383 1.00 45.10 O
TER

Atoms:
OP1: (27.764,100.040,119.269)
OP2: (26.338,97.961,118.811)
C3': (23.075,102.290,119.661)
C1': (21.967,101.585,117.716)
C5': (25.420,101.693,118.672)
O6: (18.639,96.706,118.732)
O4': (23.356,101.529,117.474)
C8: (22.171,99.045,117.954)
C2: (18.008,100.201,118.560)
C6: (18.886,97.911,118.604)
C5: (20.139,98.542,118.344)
C4: (20.168,99.911,118.203)
P: (26.673,99.380,118.527)
C4': (24.048,102.295,118.488)
C2': (21.763,102.501,118.927)
O2': (21.649,103.841,118.481)
N1: (17.859,98.843,118.704)
N2: (16.903,100.953,118.716)
N3: (19.154,100.790,118.292)
N7: (21.412,98.005,118.188)
N9: (21.472,100.230,117.947)
O5': (25.354,100.255,118.711)
O3': (23.331,103.373,120.549)
OP1: (10.958,109.421,118.439)
OP2: (13.459,109.726,118.816)
C3': (12.549,104.926,120.328)
C1': (14.316,104.306,118.892)
C5': (11.502,106.435,118.604)
O4': (13.348,104.990,118.124)
C8: (15.493,106.433,119.666)
O2': (13.173,102.567,120.077)
C6: (18.826,106.069,118.630)
C5: (17.471,106.060,118.996)
C4: (16.737,104.940,118.662)
P: (12.323,108.892,118.356)
C4': (12.124,105.104,118.884)
C2': (13.660,103.891,120.210)
C2: (18.478,103.953,117.763)
N1: (19.311,104.975,118.008)
N3: (17.186,103.836,118.040)
N6: (19.648,107.096,118.852)
N7: (16.676,106.991,119.642)
N9: (15.455,105.197,119.078)
O5': (12.350,107.486,119.081)
O3': (11.454,104.422,121.079)
Image (generated by PyMOL):
PyMOL image
show in jmol