Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A498:A499
Extra
PDB:
ATOM 1 O3' A A 497 19.668 154.536 65.510 1.00 65.28 O
ATOM 2 P U A 498 19.452 154.788 67.090 1.00 68.50 P
ATOM 3 OP1 U A 498 18.008 154.816 67.458 1.00 66.58 O
ATOM 4 OP2 U A 498 20.324 155.922 67.481 1.00 67.72 O
ATOM 5 O5' U A 498 20.076 153.466 67.705 1.00 70.93 O
ATOM 6 C5' U A 498 21.106 152.756 66.998 1.00 76.28 C
ATOM 7 C4' U A 498 20.767 151.287 66.926 1.00 79.96 C
ATOM 8 O4' U A 498 20.656 150.774 68.281 1.00 83.15 O
ATOM 9 C3' U A 498 19.456 150.925 66.240 1.00 80.22 C
ATOM 10 O3' U A 498 19.597 149.635 65.661 1.00 78.13 O
ATOM 11 C2' U A 498 18.464 150.888 67.400 1.00 82.83 C
ATOM 12 O2' U A 498 17.342 150.053 67.170 1.00 83.24 O
ATOM 13 C1' U A 498 19.333 150.323 68.525 1.00 85.20 C
ATOM 14 N1 U A 498 18.918 150.793 69.861 1.00 88.37 N
ATOM 15 C2 U A 498 18.078 149.972 70.615 1.00 89.42 C
ATOM 16 O2 U A 498 17.707 148.869 70.247 1.00 88.75 O
ATOM 17 N3 U A 498 17.691 150.500 71.821 1.00 90.77 N
ATOM 18 C4 U A 498 18.048 151.730 72.354 1.00 90.98 C
ATOM 19 O4 U A 498 17.610 152.060 73.458 1.00 92.42 O
ATOM 20 C5 U A 498 18.928 152.509 71.537 1.00 90.20 C
ATOM 21 C6 U A 498 19.328 152.029 70.352 1.00 89.51 C
ATOM 22 P A A 499 18.909 149.316 64.246 1.00 77.66 P
ATOM 23 OP1 A A 499 17.922 150.405 64.004 1.00 77.71 O
ATOM 24 OP2 A A 499 18.446 147.902 64.290 1.00 78.49 O
ATOM 25 O5' A A 499 20.098 149.463 63.189 1.00 72.48 O
TER
ATOM 1 O3' U B 498 19.597 149.635 65.661 1.00 78.13 O
ATOM 2 P A B 499 18.909 149.316 64.246 1.00 77.66 P
ATOM 3 OP1 A B 499 17.922 150.405 64.004 1.00 77.71 O
ATOM 4 OP2 A B 499 18.446 147.902 64.290 1.00 78.49 O
ATOM 5 O5' A B 499 20.098 149.463 63.189 1.00 72.48 O
ATOM 6 C5' A B 499 20.853 150.686 63.114 1.00 66.65 C
ATOM 7 C4' A B 499 21.826 150.656 61.958 1.00 62.73 C
ATOM 8 O4' A B 499 21.123 150.425 60.710 1.00 61.73 O
ATOM 9 C3' A B 499 22.544 151.976 61.741 1.00 60.21 C
ATOM 10 O3' A B 499 23.664 152.115 62.602 1.00 57.28 O
ATOM 11 C2' A B 499 22.946 151.890 60.283 1.00 60.05 C
ATOM 12 O2' A B 499 24.094 151.098 60.117 1.00 60.12 O
ATOM 13 C1' A B 499 21.716 151.204 59.675 1.00 60.38 C
ATOM 14 N9 A B 499 20.725 152.178 59.193 1.00 59.82 N
ATOM 15 C8 A B 499 19.579 152.630 59.808 1.00 60.21 C
ATOM 16 N7 A B 499 18.944 153.558 59.132 1.00 59.74 N
ATOM 17 C5 A B 499 19.714 153.720 57.990 1.00 58.94 C
ATOM 18 C6 A B 499 19.590 154.567 56.872 1.00 58.18 C
ATOM 19 N6 A B 499 18.608 155.452 56.705 1.00 57.28 N
ATOM 20 N1 A B 499 20.530 154.471 55.910 1.00 58.49 N
ATOM 21 C2 A B 499 21.517 153.580 56.064 1.00 58.38 C
ATOM 22 N3 A B 499 21.742 152.736 57.062 1.00 58.15 N
ATOM 23 C4 A B 499 20.799 152.861 58.006 1.00 58.79 C
ATOM 24 P G B 500 23.853 153.465 63.442 1.00 55.81 P
ATOM 25 OP1 G B 500 24.997 153.239 64.352 1.00 56.82 O
ATOM 26 OP2 G B 500 22.534 153.861 64.009 1.00 55.23 O
ATOM 27 O5' G B 500 24.282 154.543 62.353 1.00 54.07 O
TER
ATOM 2 P U A 498 19.452 154.788 67.090 1.00 68.50 P
ATOM 3 OP1 U A 498 18.008 154.816 67.458 1.00 66.58 O
ATOM 4 OP2 U A 498 20.324 155.922 67.481 1.00 67.72 O
ATOM 5 O5' U A 498 20.076 153.466 67.705 1.00 70.93 O
ATOM 6 C5' U A 498 21.106 152.756 66.998 1.00 76.28 C
ATOM 7 C4' U A 498 20.767 151.287 66.926 1.00 79.96 C
ATOM 8 O4' U A 498 20.656 150.774 68.281 1.00 83.15 O
ATOM 9 C3' U A 498 19.456 150.925 66.240 1.00 80.22 C
ATOM 10 O3' U A 498 19.597 149.635 65.661 1.00 78.13 O
ATOM 11 C2' U A 498 18.464 150.888 67.400 1.00 82.83 C
ATOM 12 O2' U A 498 17.342 150.053 67.170 1.00 83.24 O
ATOM 13 C1' U A 498 19.333 150.323 68.525 1.00 85.20 C
ATOM 14 N1 U A 498 18.918 150.793 69.861 1.00 88.37 N
ATOM 15 C2 U A 498 18.078 149.972 70.615 1.00 89.42 C
ATOM 16 O2 U A 498 17.707 148.869 70.247 1.00 88.75 O
ATOM 17 N3 U A 498 17.691 150.500 71.821 1.00 90.77 N
ATOM 18 C4 U A 498 18.048 151.730 72.354 1.00 90.98 C
ATOM 19 O4 U A 498 17.610 152.060 73.458 1.00 92.42 O
ATOM 20 C5 U A 498 18.928 152.509 71.537 1.00 90.20 C
ATOM 21 C6 U A 498 19.328 152.029 70.352 1.00 89.51 C
ATOM 22 P A A 499 18.909 149.316 64.246 1.00 77.66 P
ATOM 23 OP1 A A 499 17.922 150.405 64.004 1.00 77.71 O
ATOM 24 OP2 A A 499 18.446 147.902 64.290 1.00 78.49 O
ATOM 25 O5' A A 499 20.098 149.463 63.189 1.00 72.48 O
TER
ATOM 1 O3' U B 498 19.597 149.635 65.661 1.00 78.13 O
ATOM 2 P A B 499 18.909 149.316 64.246 1.00 77.66 P
ATOM 3 OP1 A B 499 17.922 150.405 64.004 1.00 77.71 O
ATOM 4 OP2 A B 499 18.446 147.902 64.290 1.00 78.49 O
ATOM 5 O5' A B 499 20.098 149.463 63.189 1.00 72.48 O
ATOM 6 C5' A B 499 20.853 150.686 63.114 1.00 66.65 C
ATOM 7 C4' A B 499 21.826 150.656 61.958 1.00 62.73 C
ATOM 8 O4' A B 499 21.123 150.425 60.710 1.00 61.73 O
ATOM 9 C3' A B 499 22.544 151.976 61.741 1.00 60.21 C
ATOM 10 O3' A B 499 23.664 152.115 62.602 1.00 57.28 O
ATOM 11 C2' A B 499 22.946 151.890 60.283 1.00 60.05 C
ATOM 12 O2' A B 499 24.094 151.098 60.117 1.00 60.12 O
ATOM 13 C1' A B 499 21.716 151.204 59.675 1.00 60.38 C
ATOM 14 N9 A B 499 20.725 152.178 59.193 1.00 59.82 N
ATOM 15 C8 A B 499 19.579 152.630 59.808 1.00 60.21 C
ATOM 16 N7 A B 499 18.944 153.558 59.132 1.00 59.74 N
ATOM 17 C5 A B 499 19.714 153.720 57.990 1.00 58.94 C
ATOM 18 C6 A B 499 19.590 154.567 56.872 1.00 58.18 C
ATOM 19 N6 A B 499 18.608 155.452 56.705 1.00 57.28 N
ATOM 20 N1 A B 499 20.530 154.471 55.910 1.00 58.49 N
ATOM 21 C2 A B 499 21.517 153.580 56.064 1.00 58.38 C
ATOM 22 N3 A B 499 21.742 152.736 57.062 1.00 58.15 N
ATOM 23 C4 A B 499 20.799 152.861 58.006 1.00 58.79 C
ATOM 24 P G B 500 23.853 153.465 63.442 1.00 55.81 P
ATOM 25 OP1 G B 500 24.997 153.239 64.352 1.00 56.82 O
ATOM 26 OP2 G B 500 22.534 153.861 64.009 1.00 55.23 O
ATOM 27 O5' G B 500 24.282 154.543 62.353 1.00 54.07 O
TER
Atoms:
C4: (18.048,151.730,72.354)
N3: (17.691,150.500,71.821)
OP1: (18.008,154.816,67.458)
OP2: (20.324,155.922,67.481)
C2: (18.078,149.972,70.615)
C1': (19.333,150.323,68.525)
C3': (19.456,150.925,66.240)
O5': (20.076,153.466,67.705)
O4': (20.656,150.774,68.281)
C5': (21.106,152.756,66.998)
P: (19.452,154.788,67.090)
C4': (20.767,151.287,66.926)
C2': (18.464,150.888,67.400)
O2': (17.342,150.053,67.170)
N1: (18.918,150.793,69.861)
O4: (17.610,152.060,73.458)
O2: (17.707,148.869,70.247)
C6: (19.328,152.029,70.352)
C5: (18.928,152.509,71.537)
O3': (19.597,149.635,65.661)
N3: (17.691,150.500,71.821)
OP1: (18.008,154.816,67.458)
OP2: (20.324,155.922,67.481)
C2: (18.078,149.972,70.615)
C1': (19.333,150.323,68.525)
C3': (19.456,150.925,66.240)
O5': (20.076,153.466,67.705)
O4': (20.656,150.774,68.281)
C5': (21.106,152.756,66.998)
P: (19.452,154.788,67.090)
C4': (20.767,151.287,66.926)
C2': (18.464,150.888,67.400)
O2': (17.342,150.053,67.170)
N1: (18.918,150.793,69.861)
O4: (17.610,152.060,73.458)
O2: (17.707,148.869,70.247)
C6: (19.328,152.029,70.352)
C5: (18.928,152.509,71.537)
O3': (19.597,149.635,65.661)
OP1: (17.922,150.405,64.004)
OP2: (18.446,147.902,64.290)
C3': (22.544,151.976,61.741)
C1': (21.716,151.204,59.675)
C5': (20.853,150.686,63.114)
O4': (21.123,150.425,60.710)
C8: (19.579,152.630,59.808)
O2': (24.094,151.098,60.117)
C6: (19.590,154.567,56.872)
C5: (19.714,153.720,57.990)
C4: (20.799,152.861,58.006)
P: (18.909,149.316,64.246)
C4': (21.826,150.656,61.958)
C2': (22.946,151.890,60.283)
C2: (21.517,153.580,56.064)
N1: (20.530,154.471,55.910)
N3: (21.742,152.736,57.062)
N6: (18.608,155.452,56.705)
N7: (18.944,153.558,59.132)
N9: (20.725,152.178,59.193)
O5': (20.098,149.463,63.189)
O3': (23.664,152.115,62.602)
OP2: (18.446,147.902,64.290)
C3': (22.544,151.976,61.741)
C1': (21.716,151.204,59.675)
C5': (20.853,150.686,63.114)
O4': (21.123,150.425,60.710)
C8: (19.579,152.630,59.808)
O2': (24.094,151.098,60.117)
C6: (19.590,154.567,56.872)
C5: (19.714,153.720,57.990)
C4: (20.799,152.861,58.006)
P: (18.909,149.316,64.246)
C4': (21.826,150.656,61.958)
C2': (22.946,151.890,60.283)
C2: (21.517,153.580,56.064)
N1: (20.530,154.471,55.910)
N3: (21.742,152.736,57.062)
N6: (18.608,155.452,56.705)
N7: (18.944,153.558,59.132)
N9: (20.725,152.178,59.193)
O5': (20.098,149.463,63.189)
O3': (23.664,152.115,62.602)
Image (generated by PyMOL):