Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01052:0554
Extra
PDB:
ATOM 1 O3' A A1051 5.598 106.138 97.786 1.00 54.37 O
ATOM 2 P G A1052 6.100 106.017 99.303 1.00 53.94 P
ATOM 3 OP1 G A1052 5.473 107.128 100.051 1.00 53.15 O
ATOM 4 OP2 G A1052 7.575 105.889 99.289 1.00 54.52 O
ATOM 5 O5' G A1052 5.464 104.638 99.808 1.00 55.71 O
ATOM 6 C5' G A1052 4.063 104.549 100.156 1.00 51.32 C
ATOM 7 C4' G A1052 3.672 103.122 100.468 1.00 51.40 C
ATOM 8 O4' G A1052 4.064 102.263 99.368 1.00 52.04 O
ATOM 9 C3' G A1052 4.309 102.448 101.672 1.00 52.46 C
ATOM 10 O3' G A1052 3.668 102.793 102.888 1.00 53.38 O
ATOM 11 C2' G A1052 4.068 100.983 101.358 1.00 53.68 C
ATOM 12 O2' G A1052 2.713 100.637 101.567 1.00 56.75 O
ATOM 13 C1' G A1052 4.345 100.956 99.856 1.00 52.86 C
ATOM 14 N9 G A1052 5.737 100.631 99.549 1.00 52.32 N
ATOM 15 C8 G A1052 6.724 101.512 99.175 1.00 52.82 C
ATOM 16 N7 G A1052 7.875 100.935 98.961 1.00 53.87 N
ATOM 17 C5 G A1052 7.640 99.589 99.210 1.00 52.73 C
ATOM 18 C6 G A1052 8.523 98.470 99.138 1.00 52.60 C
ATOM 19 O6 G A1052 9.719 98.447 98.827 1.00 53.69 O
ATOM 20 N1 G A1052 7.876 97.288 99.474 1.00 51.97 N
ATOM 21 C2 G A1052 6.557 97.187 99.838 1.00 52.16 C
ATOM 22 N2 G A1052 6.135 95.949 100.148 1.00 50.89 N
ATOM 23 N3 G A1052 5.718 98.220 99.900 1.00 49.91 N
ATOM 24 C4 G A1052 6.324 99.381 99.576 1.00 51.49 C
ATOM 25 P G A1053 4.505 102.779 104.261 1.00 55.99 P
ATOM 26 OP1 G A1053 3.561 103.194 105.326 1.00 53.29 O
ATOM 27 OP2 G A1053 5.758 103.555 104.048 1.00 56.96 O
ATOM 28 O5' G A1053 4.934 101.254 104.460 1.00 52.34 O
TER
ATOM 1 O3' A B 553 -1.127 91.267 97.973 1.00 57.89 O
ATOM 2 P A B 554 -1.275 90.726 99.479 1.00 57.93 P
ATOM 3 OP1 A B 554 -1.455 89.249 99.390 1.00 56.67 O
ATOM 4 OP2 A B 554 -2.284 91.562 100.178 1.00 56.61 O
ATOM 5 O5' A B 554 0.137 91.028 100.159 1.00 59.68 O
ATOM 6 C5' A B 554 1.354 90.398 99.684 1.00 57.65 C
ATOM 7 C4' A B 554 2.555 91.218 100.094 1.00 55.10 C
ATOM 8 O4' A B 554 2.426 92.556 99.542 1.00 53.86 O
ATOM 9 C3' A B 554 2.681 91.462 101.586 1.00 54.54 C
ATOM 10 O3' A B 554 3.273 90.355 102.251 1.00 55.26 O
ATOM 11 C2' A B 554 3.531 92.724 101.637 1.00 52.95 C
ATOM 12 O2' A B 554 4.905 92.468 101.413 1.00 51.36 O
ATOM 13 C1' A B 554 2.960 93.506 100.452 1.00 52.55 C
ATOM 14 N9 A B 554 1.890 94.422 100.840 1.00 51.10 N
ATOM 15 C8 A B 554 0.547 94.158 100.942 1.00 52.12 C
ATOM 16 N7 A B 554 -0.164 95.181 101.351 1.00 51.12 N
ATOM 17 C5 A B 554 0.772 96.190 101.521 1.00 50.38 C
ATOM 18 C6 A B 554 0.657 97.530 101.938 1.00 49.48 C
ATOM 19 N6 A B 554 -0.495 98.109 102.268 1.00 47.60 N
ATOM 20 N1 A B 554 1.786 98.267 102.001 1.00 49.63 N
ATOM 21 C2 A B 554 2.945 97.691 101.660 1.00 50.30 C
ATOM 22 N3 A B 554 3.181 96.446 101.249 1.00 51.39 N
ATOM 23 C4 A B 554 2.041 95.737 101.202 1.00 50.91 C
ATOM 24 P U B 555 2.650 89.848 103.642 1.00 54.57 P
ATOM 25 OP1 U B 555 3.547 88.796 104.157 1.00 52.90 O
ATOM 26 OP2 U B 555 1.213 89.542 103.423 1.00 55.11 O
ATOM 27 O5' U B 555 2.728 91.130 104.587 1.00 52.01 O
TER
ATOM 2 P G A1052 6.100 106.017 99.303 1.00 53.94 P
ATOM 3 OP1 G A1052 5.473 107.128 100.051 1.00 53.15 O
ATOM 4 OP2 G A1052 7.575 105.889 99.289 1.00 54.52 O
ATOM 5 O5' G A1052 5.464 104.638 99.808 1.00 55.71 O
ATOM 6 C5' G A1052 4.063 104.549 100.156 1.00 51.32 C
ATOM 7 C4' G A1052 3.672 103.122 100.468 1.00 51.40 C
ATOM 8 O4' G A1052 4.064 102.263 99.368 1.00 52.04 O
ATOM 9 C3' G A1052 4.309 102.448 101.672 1.00 52.46 C
ATOM 10 O3' G A1052 3.668 102.793 102.888 1.00 53.38 O
ATOM 11 C2' G A1052 4.068 100.983 101.358 1.00 53.68 C
ATOM 12 O2' G A1052 2.713 100.637 101.567 1.00 56.75 O
ATOM 13 C1' G A1052 4.345 100.956 99.856 1.00 52.86 C
ATOM 14 N9 G A1052 5.737 100.631 99.549 1.00 52.32 N
ATOM 15 C8 G A1052 6.724 101.512 99.175 1.00 52.82 C
ATOM 16 N7 G A1052 7.875 100.935 98.961 1.00 53.87 N
ATOM 17 C5 G A1052 7.640 99.589 99.210 1.00 52.73 C
ATOM 18 C6 G A1052 8.523 98.470 99.138 1.00 52.60 C
ATOM 19 O6 G A1052 9.719 98.447 98.827 1.00 53.69 O
ATOM 20 N1 G A1052 7.876 97.288 99.474 1.00 51.97 N
ATOM 21 C2 G A1052 6.557 97.187 99.838 1.00 52.16 C
ATOM 22 N2 G A1052 6.135 95.949 100.148 1.00 50.89 N
ATOM 23 N3 G A1052 5.718 98.220 99.900 1.00 49.91 N
ATOM 24 C4 G A1052 6.324 99.381 99.576 1.00 51.49 C
ATOM 25 P G A1053 4.505 102.779 104.261 1.00 55.99 P
ATOM 26 OP1 G A1053 3.561 103.194 105.326 1.00 53.29 O
ATOM 27 OP2 G A1053 5.758 103.555 104.048 1.00 56.96 O
ATOM 28 O5' G A1053 4.934 101.254 104.460 1.00 52.34 O
TER
ATOM 1 O3' A B 553 -1.127 91.267 97.973 1.00 57.89 O
ATOM 2 P A B 554 -1.275 90.726 99.479 1.00 57.93 P
ATOM 3 OP1 A B 554 -1.455 89.249 99.390 1.00 56.67 O
ATOM 4 OP2 A B 554 -2.284 91.562 100.178 1.00 56.61 O
ATOM 5 O5' A B 554 0.137 91.028 100.159 1.00 59.68 O
ATOM 6 C5' A B 554 1.354 90.398 99.684 1.00 57.65 C
ATOM 7 C4' A B 554 2.555 91.218 100.094 1.00 55.10 C
ATOM 8 O4' A B 554 2.426 92.556 99.542 1.00 53.86 O
ATOM 9 C3' A B 554 2.681 91.462 101.586 1.00 54.54 C
ATOM 10 O3' A B 554 3.273 90.355 102.251 1.00 55.26 O
ATOM 11 C2' A B 554 3.531 92.724 101.637 1.00 52.95 C
ATOM 12 O2' A B 554 4.905 92.468 101.413 1.00 51.36 O
ATOM 13 C1' A B 554 2.960 93.506 100.452 1.00 52.55 C
ATOM 14 N9 A B 554 1.890 94.422 100.840 1.00 51.10 N
ATOM 15 C8 A B 554 0.547 94.158 100.942 1.00 52.12 C
ATOM 16 N7 A B 554 -0.164 95.181 101.351 1.00 51.12 N
ATOM 17 C5 A B 554 0.772 96.190 101.521 1.00 50.38 C
ATOM 18 C6 A B 554 0.657 97.530 101.938 1.00 49.48 C
ATOM 19 N6 A B 554 -0.495 98.109 102.268 1.00 47.60 N
ATOM 20 N1 A B 554 1.786 98.267 102.001 1.00 49.63 N
ATOM 21 C2 A B 554 2.945 97.691 101.660 1.00 50.30 C
ATOM 22 N3 A B 554 3.181 96.446 101.249 1.00 51.39 N
ATOM 23 C4 A B 554 2.041 95.737 101.202 1.00 50.91 C
ATOM 24 P U B 555 2.650 89.848 103.642 1.00 54.57 P
ATOM 25 OP1 U B 555 3.547 88.796 104.157 1.00 52.90 O
ATOM 26 OP2 U B 555 1.213 89.542 103.423 1.00 55.11 O
ATOM 27 O5' U B 555 2.728 91.130 104.587 1.00 52.01 O
TER
Atoms:
OP1: (5.473,107.128,100.051)
OP2: (7.575,105.889,99.289)
C3': (4.309,102.448,101.672)
C1': (4.345,100.956,99.856)
C5': (4.063,104.549,100.156)
O6: (9.719,98.447,98.827)
O4': (4.064,102.263,99.368)
C8: (6.724,101.512,99.175)
C2: (6.557,97.187,99.838)
C6: (8.523,98.470,99.138)
C5: (7.640,99.589,99.210)
C4: (6.324,99.381,99.576)
P: (6.100,106.017,99.303)
C4': (3.672,103.122,100.468)
C2': (4.068,100.983,101.358)
O2': (2.713,100.637,101.567)
N1: (7.876,97.288,99.474)
N2: (6.135,95.949,100.148)
N3: (5.718,98.220,99.900)
N7: (7.875,100.935,98.961)
N9: (5.737,100.631,99.549)
O5': (5.464,104.638,99.808)
O3': (3.668,102.793,102.888)
OP2: (7.575,105.889,99.289)
C3': (4.309,102.448,101.672)
C1': (4.345,100.956,99.856)
C5': (4.063,104.549,100.156)
O6: (9.719,98.447,98.827)
O4': (4.064,102.263,99.368)
C8: (6.724,101.512,99.175)
C2: (6.557,97.187,99.838)
C6: (8.523,98.470,99.138)
C5: (7.640,99.589,99.210)
C4: (6.324,99.381,99.576)
P: (6.100,106.017,99.303)
C4': (3.672,103.122,100.468)
C2': (4.068,100.983,101.358)
O2': (2.713,100.637,101.567)
N1: (7.876,97.288,99.474)
N2: (6.135,95.949,100.148)
N3: (5.718,98.220,99.900)
N7: (7.875,100.935,98.961)
N9: (5.737,100.631,99.549)
O5': (5.464,104.638,99.808)
O3': (3.668,102.793,102.888)
OP1: (-1.455,89.249,99.390)
OP2: (-2.284,91.562,100.178)
C3': (2.681,91.462,101.586)
C1': (2.960,93.506,100.452)
C5': (1.354,90.398,99.684)
O4': (2.426,92.556,99.542)
C8: (0.547,94.158,100.942)
O2': (4.905,92.468,101.413)
C6: (0.657,97.530,101.938)
C5: (0.772,96.190,101.521)
C4: (2.041,95.737,101.202)
P: (-1.275,90.726,99.479)
C4': (2.555,91.218,100.094)
C2': (3.531,92.724,101.637)
C2: (2.945,97.691,101.660)
N1: (1.786,98.267,102.001)
N3: (3.181,96.446,101.249)
N6: (-0.495,98.109,102.268)
N7: (-0.164,95.181,101.351)
N9: (1.890,94.422,100.840)
O5': (0.137,91.028,100.159)
O3': (3.273,90.355,102.251)
OP2: (-2.284,91.562,100.178)
C3': (2.681,91.462,101.586)
C1': (2.960,93.506,100.452)
C5': (1.354,90.398,99.684)
O4': (2.426,92.556,99.542)
C8: (0.547,94.158,100.942)
O2': (4.905,92.468,101.413)
C6: (0.657,97.530,101.938)
C5: (0.772,96.190,101.521)
C4: (2.041,95.737,101.202)
P: (-1.275,90.726,99.479)
C4': (2.555,91.218,100.094)
C2': (3.531,92.724,101.637)
C2: (2.945,97.691,101.660)
N1: (1.786,98.267,102.001)
N3: (3.181,96.446,101.249)
N6: (-0.495,98.109,102.268)
N7: (-0.164,95.181,101.351)
N9: (1.890,94.422,100.840)
O5': (0.137,91.028,100.159)
O3': (3.273,90.355,102.251)
Image (generated by PyMOL):