ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0401:0181

Extra

PDB:
ATOM 1 O3' C A 400 91.788 87.911 14.352 1.00 57.02 O
ATOM 2 P G A 401 91.121 87.204 15.637 1.00 58.18 P
ATOM 3 OP1 G A 401 92.221 86.985 16.617 1.00 57.18 O
ATOM 4 OP2 G A 401 90.303 86.049 15.182 1.00 59.51 O
ATOM 5 O5' G A 401 90.118 88.301 16.212 1.00 55.67 O
ATOM 6 C5' G A 401 90.589 89.609 16.558 1.00 51.28 C
ATOM 7 C4' G A 401 89.430 90.543 16.805 1.00 49.39 C
ATOM 8 O4' G A 401 88.629 90.688 15.601 1.00 47.62 O
ATOM 9 C3' G A 401 88.408 90.104 17.836 1.00 47.82 C
ATOM 10 O3' G A 401 88.862 90.299 19.163 1.00 46.12 O
ATOM 11 C2' G A 401 87.230 91.002 17.497 1.00 47.06 C
ATOM 12 O2' G A 401 87.435 92.320 17.956 1.00 47.37 O
ATOM 13 C1' G A 401 87.285 90.993 15.965 1.00 47.80 C
ATOM 14 N9 G A 401 86.388 89.997 15.376 1.00 47.35 N
ATOM 15 C8 G A 401 86.729 88.775 14.845 1.00 45.92 C
ATOM 16 N7 G A 401 85.701 88.107 14.398 1.00 45.88 N
ATOM 17 C5 G A 401 84.615 88.935 14.644 1.00 45.77 C
ATOM 18 C6 G A 401 83.231 88.747 14.370 1.00 46.01 C
ATOM 19 O6 G A 401 82.675 87.782 13.830 1.00 46.10 O
ATOM 20 N1 G A 401 82.474 89.838 14.791 1.00 47.33 N
ATOM 21 C2 G A 401 82.980 90.967 15.394 1.00 46.42 C
ATOM 22 N2 G A 401 82.092 91.916 15.725 1.00 44.07 N
ATOM 23 N3 G A 401 84.264 91.152 15.651 1.00 46.92 N
ATOM 24 C4 G A 401 85.019 90.104 15.250 1.00 46.49 C
ATOM 25 P C A 402 88.300 89.355 20.335 1.00 46.47 P
ATOM 26 OP1 C A 402 89.191 89.530 21.498 1.00 46.69 O
ATOM 27 OP2 C A 402 88.075 87.993 19.789 1.00 50.30 O
ATOM 28 O5' C A 402 86.871 89.972 20.686 1.00 47.53 O
TER

ATOM 1 O3' A B 180 75.520 98.308 18.411 1.00 46.55 O
ATOM 2 P A B 181 76.757 99.268 18.747 1.00 45.39 P
ATOM 3 OP1 A B 181 76.585 99.641 20.176 1.00 46.89 O
ATOM 4 OP2 A B 181 76.865 100.326 17.712 1.00 43.37 O
ATOM 5 O5' A B 181 78.020 98.312 18.647 1.00 44.53 O
ATOM 6 C5' A B 181 78.085 97.130 19.446 1.00 44.47 C
ATOM 7 C4' A B 181 78.560 95.969 18.619 1.00 45.38 C
ATOM 8 O4' A B 181 79.914 96.216 18.173 1.00 44.50 O
ATOM 9 C3' A B 181 78.631 94.654 19.375 1.00 46.15 C
ATOM 10 O3' A B 181 77.340 94.039 19.316 1.00 47.98 O
ATOM 11 C2' A B 181 79.681 93.870 18.595 1.00 46.97 C
ATOM 12 O2' A B 181 79.125 93.201 17.482 1.00 50.56 O
ATOM 13 C1' A B 181 80.613 94.989 18.105 1.00 46.31 C
ATOM 14 N9 A B 181 81.873 95.132 18.828 1.00 45.72 N
ATOM 15 C8 A B 181 82.085 95.663 20.078 1.00 46.16 C
ATOM 16 N7 A B 181 83.339 95.634 20.458 1.00 45.33 N
ATOM 17 C5 A B 181 83.998 95.049 19.386 1.00 44.95 C
ATOM 18 C6 A B 181 85.348 94.722 19.169 1.00 43.84 C
ATOM 19 N6 A B 181 86.316 94.942 20.060 1.00 43.16 N
ATOM 20 N1 A B 181 85.672 94.146 17.992 1.00 45.20 N
ATOM 21 C2 A B 181 84.702 93.913 17.102 1.00 44.67 C
ATOM 22 N3 A B 181 83.399 94.169 17.191 1.00 45.54 N
ATOM 23 C4 A B 181 83.109 94.742 18.372 1.00 45.69 C
ATOM 24 P A B 182 76.908 92.928 20.403 1.00 48.07 P
ATOM 25 OP1 A B 182 77.810 93.022 21.570 1.00 46.77 O
ATOM 26 OP2 A B 182 76.784 91.640 19.682 1.00 47.38 O
ATOM 27 O5' A B 182 75.449 93.393 20.846 1.00 46.09 O
TER

Atoms:
OP1: (92.221,86.985,16.617)
OP2: (90.303,86.049,15.182)
C3': (88.408,90.104,17.836)
C1': (87.285,90.993,15.965)
C5': (90.589,89.609,16.558)
O6: (82.675,87.782,13.830)
O4': (88.629,90.688,15.601)
C8: (86.729,88.775,14.845)
C2: (82.980,90.967,15.394)
C6: (83.231,88.747,14.370)
C5: (84.615,88.935,14.644)
C4: (85.019,90.104,15.250)
P: (91.121,87.204,15.637)
C4': (89.430,90.543,16.805)
C2': (87.230,91.002,17.497)
O2': (87.435,92.320,17.956)
N1: (82.474,89.838,14.791)
N2: (82.092,91.916,15.725)
N3: (84.264,91.152,15.651)
N7: (85.701,88.107,14.398)
N9: (86.388,89.997,15.376)
O5': (90.118,88.301,16.212)
O3': (88.862,90.299,19.163)
OP1: (76.585,99.641,20.176)
OP2: (76.865,100.326,17.712)
C3': (78.631,94.654,19.375)
C1': (80.613,94.989,18.105)
C5': (78.085,97.130,19.446)
O4': (79.914,96.216,18.173)
C8: (82.085,95.663,20.078)
O2': (79.125,93.201,17.482)
C6: (85.348,94.722,19.169)
C5: (83.998,95.049,19.386)
C4: (83.109,94.742,18.372)
P: (76.757,99.268,18.747)
C4': (78.560,95.969,18.619)
C2': (79.681,93.870,18.595)
C2: (84.702,93.913,17.102)
N1: (85.672,94.146,17.992)
N3: (83.399,94.169,17.191)
N6: (86.316,94.942,20.060)
N7: (83.339,95.634,20.458)
N9: (81.873,95.132,18.828)
O5': (78.020,98.312,18.647)
O3': (77.340,94.039,19.316)
Image (generated by PyMOL):
PyMOL image
show in jmol