Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0498:0499
Extra
PDB:
ATOM 1 O3' A A 497 19.724 155.020 65.465 1.00 75.08 O
ATOM 2 P U A 498 19.334 155.074 67.025 1.00 76.44 P
ATOM 3 OP1 U A 498 17.956 154.533 67.183 1.00 75.72 O
ATOM 4 OP2 U A 498 19.644 156.432 67.526 1.00 76.48 O
ATOM 5 O5' U A 498 20.345 154.049 67.708 1.00 79.70 O
ATOM 6 C5' U A 498 21.406 153.417 66.956 1.00 84.83 C
ATOM 7 C4' U A 498 21.220 151.911 66.950 1.00 88.35 C
ATOM 8 O4' U A 498 21.181 151.435 68.326 1.00 90.97 O
ATOM 9 C3' U A 498 19.940 151.396 66.297 1.00 88.34 C
ATOM 10 O3' U A 498 20.171 150.119 65.721 1.00 85.05 O
ATOM 11 C2' U A 498 18.977 151.277 67.474 1.00 90.76 C
ATOM 12 O2' U A 498 17.946 150.326 67.265 1.00 90.26 O
ATOM 13 C1' U A 498 19.919 150.847 68.604 1.00 93.47 C
ATOM 14 N1 U A 498 19.471 151.322 69.928 1.00 96.69 N
ATOM 15 C2 U A 498 19.185 150.380 70.911 1.00 97.80 C
ATOM 16 O2 U A 498 19.323 149.176 70.750 1.00 98.78 O
ATOM 17 N3 U A 498 18.732 150.906 72.095 1.00 98.16 N
ATOM 18 C4 U A 498 18.543 152.241 72.399 1.00 98.07 C
ATOM 19 O4 U A 498 18.059 152.551 73.488 1.00 99.87 O
ATOM 20 C5 U A 498 18.881 153.146 71.351 1.00 97.17 C
ATOM 21 C6 U A 498 19.322 152.674 70.185 1.00 97.13 C
ATOM 22 P A A 499 19.264 149.626 64.490 1.00 83.89 P
ATOM 23 OP1 A A 499 18.058 150.489 64.404 1.00 84.01 O
ATOM 24 OP2 A A 499 19.101 148.151 64.669 1.00 84.94 O
ATOM 25 O5' A A 499 20.170 149.915 63.207 1.00 78.34 O
TER
ATOM 1 O3' U B 498 20.171 150.119 65.721 1.00 85.05 O
ATOM 2 P A B 499 19.264 149.626 64.490 1.00 83.89 P
ATOM 3 OP1 A B 499 18.058 150.489 64.404 1.00 84.01 O
ATOM 4 OP2 A B 499 19.101 148.151 64.669 1.00 84.94 O
ATOM 5 O5' A B 499 20.170 149.915 63.207 1.00 78.34 O
ATOM 6 C5' A B 499 20.921 151.142 63.093 1.00 70.65 C
ATOM 7 C4' A B 499 21.915 151.057 61.954 1.00 65.92 C
ATOM 8 O4' A B 499 21.216 150.769 60.713 1.00 65.41 O
ATOM 9 C3' A B 499 22.660 152.352 61.672 1.00 62.89 C
ATOM 10 O3' A B 499 23.787 152.499 62.528 1.00 59.99 O
ATOM 11 C2' A B 499 23.052 152.183 60.214 1.00 62.59 C
ATOM 12 O2' A B 499 24.147 151.322 60.058 1.00 63.25 O
ATOM 13 C1' A B 499 21.812 151.492 59.646 1.00 64.26 C
ATOM 14 N9 A B 499 20.836 152.461 59.141 1.00 65.60 N
ATOM 15 C8 A B 499 19.662 152.871 59.728 1.00 65.87 C
ATOM 16 N7 A B 499 19.039 153.812 59.066 1.00 65.29 N
ATOM 17 C5 A B 499 19.844 154.027 57.960 1.00 65.70 C
ATOM 18 C6 A B 499 19.745 154.916 56.887 1.00 66.22 C
ATOM 19 N6 A B 499 18.756 155.794 56.746 1.00 65.79 N
ATOM 20 N1 A B 499 20.715 154.880 55.952 1.00 67.22 N
ATOM 21 C2 A B 499 21.713 154.002 56.098 1.00 67.05 C
ATOM 22 N3 A B 499 21.920 153.118 57.066 1.00 66.00 N
ATOM 23 C4 A B 499 20.941 153.185 57.980 1.00 65.53 C
ATOM 24 P G B 500 23.909 153.790 63.480 1.00 57.53 P
ATOM 25 OP1 G B 500 25.045 153.534 64.396 1.00 57.09 O
ATOM 26 OP2 G B 500 22.576 154.129 64.051 1.00 55.36 O
ATOM 27 O5' G B 500 24.336 154.945 62.479 1.00 55.74 O
TER
ATOM 2 P U A 498 19.334 155.074 67.025 1.00 76.44 P
ATOM 3 OP1 U A 498 17.956 154.533 67.183 1.00 75.72 O
ATOM 4 OP2 U A 498 19.644 156.432 67.526 1.00 76.48 O
ATOM 5 O5' U A 498 20.345 154.049 67.708 1.00 79.70 O
ATOM 6 C5' U A 498 21.406 153.417 66.956 1.00 84.83 C
ATOM 7 C4' U A 498 21.220 151.911 66.950 1.00 88.35 C
ATOM 8 O4' U A 498 21.181 151.435 68.326 1.00 90.97 O
ATOM 9 C3' U A 498 19.940 151.396 66.297 1.00 88.34 C
ATOM 10 O3' U A 498 20.171 150.119 65.721 1.00 85.05 O
ATOM 11 C2' U A 498 18.977 151.277 67.474 1.00 90.76 C
ATOM 12 O2' U A 498 17.946 150.326 67.265 1.00 90.26 O
ATOM 13 C1' U A 498 19.919 150.847 68.604 1.00 93.47 C
ATOM 14 N1 U A 498 19.471 151.322 69.928 1.00 96.69 N
ATOM 15 C2 U A 498 19.185 150.380 70.911 1.00 97.80 C
ATOM 16 O2 U A 498 19.323 149.176 70.750 1.00 98.78 O
ATOM 17 N3 U A 498 18.732 150.906 72.095 1.00 98.16 N
ATOM 18 C4 U A 498 18.543 152.241 72.399 1.00 98.07 C
ATOM 19 O4 U A 498 18.059 152.551 73.488 1.00 99.87 O
ATOM 20 C5 U A 498 18.881 153.146 71.351 1.00 97.17 C
ATOM 21 C6 U A 498 19.322 152.674 70.185 1.00 97.13 C
ATOM 22 P A A 499 19.264 149.626 64.490 1.00 83.89 P
ATOM 23 OP1 A A 499 18.058 150.489 64.404 1.00 84.01 O
ATOM 24 OP2 A A 499 19.101 148.151 64.669 1.00 84.94 O
ATOM 25 O5' A A 499 20.170 149.915 63.207 1.00 78.34 O
TER
ATOM 1 O3' U B 498 20.171 150.119 65.721 1.00 85.05 O
ATOM 2 P A B 499 19.264 149.626 64.490 1.00 83.89 P
ATOM 3 OP1 A B 499 18.058 150.489 64.404 1.00 84.01 O
ATOM 4 OP2 A B 499 19.101 148.151 64.669 1.00 84.94 O
ATOM 5 O5' A B 499 20.170 149.915 63.207 1.00 78.34 O
ATOM 6 C5' A B 499 20.921 151.142 63.093 1.00 70.65 C
ATOM 7 C4' A B 499 21.915 151.057 61.954 1.00 65.92 C
ATOM 8 O4' A B 499 21.216 150.769 60.713 1.00 65.41 O
ATOM 9 C3' A B 499 22.660 152.352 61.672 1.00 62.89 C
ATOM 10 O3' A B 499 23.787 152.499 62.528 1.00 59.99 O
ATOM 11 C2' A B 499 23.052 152.183 60.214 1.00 62.59 C
ATOM 12 O2' A B 499 24.147 151.322 60.058 1.00 63.25 O
ATOM 13 C1' A B 499 21.812 151.492 59.646 1.00 64.26 C
ATOM 14 N9 A B 499 20.836 152.461 59.141 1.00 65.60 N
ATOM 15 C8 A B 499 19.662 152.871 59.728 1.00 65.87 C
ATOM 16 N7 A B 499 19.039 153.812 59.066 1.00 65.29 N
ATOM 17 C5 A B 499 19.844 154.027 57.960 1.00 65.70 C
ATOM 18 C6 A B 499 19.745 154.916 56.887 1.00 66.22 C
ATOM 19 N6 A B 499 18.756 155.794 56.746 1.00 65.79 N
ATOM 20 N1 A B 499 20.715 154.880 55.952 1.00 67.22 N
ATOM 21 C2 A B 499 21.713 154.002 56.098 1.00 67.05 C
ATOM 22 N3 A B 499 21.920 153.118 57.066 1.00 66.00 N
ATOM 23 C4 A B 499 20.941 153.185 57.980 1.00 65.53 C
ATOM 24 P G B 500 23.909 153.790 63.480 1.00 57.53 P
ATOM 25 OP1 G B 500 25.045 153.534 64.396 1.00 57.09 O
ATOM 26 OP2 G B 500 22.576 154.129 64.051 1.00 55.36 O
ATOM 27 O5' G B 500 24.336 154.945 62.479 1.00 55.74 O
TER
Atoms:
C4: (18.543,152.241,72.399)
N3: (18.732,150.906,72.095)
OP1: (17.956,154.533,67.183)
OP2: (19.644,156.432,67.526)
C2: (19.185,150.380,70.911)
C1': (19.919,150.847,68.604)
C3': (19.940,151.396,66.297)
O5': (20.345,154.049,67.708)
O4': (21.181,151.435,68.326)
C5': (21.406,153.417,66.956)
P: (19.334,155.074,67.025)
C4': (21.220,151.911,66.950)
C2': (18.977,151.277,67.474)
O2': (17.946,150.326,67.265)
N1: (19.471,151.322,69.928)
O4: (18.059,152.551,73.488)
O2: (19.323,149.176,70.750)
C6: (19.322,152.674,70.185)
C5: (18.881,153.146,71.351)
O3': (20.171,150.119,65.721)
N3: (18.732,150.906,72.095)
OP1: (17.956,154.533,67.183)
OP2: (19.644,156.432,67.526)
C2: (19.185,150.380,70.911)
C1': (19.919,150.847,68.604)
C3': (19.940,151.396,66.297)
O5': (20.345,154.049,67.708)
O4': (21.181,151.435,68.326)
C5': (21.406,153.417,66.956)
P: (19.334,155.074,67.025)
C4': (21.220,151.911,66.950)
C2': (18.977,151.277,67.474)
O2': (17.946,150.326,67.265)
N1: (19.471,151.322,69.928)
O4: (18.059,152.551,73.488)
O2: (19.323,149.176,70.750)
C6: (19.322,152.674,70.185)
C5: (18.881,153.146,71.351)
O3': (20.171,150.119,65.721)
OP1: (18.058,150.489,64.404)
OP2: (19.101,148.151,64.669)
C3': (22.660,152.352,61.672)
C1': (21.812,151.492,59.646)
C5': (20.921,151.142,63.093)
O4': (21.216,150.769,60.713)
C8: (19.662,152.871,59.728)
O2': (24.147,151.322,60.058)
C6: (19.745,154.916,56.887)
C5: (19.844,154.027,57.960)
C4: (20.941,153.185,57.980)
P: (19.264,149.626,64.490)
C4': (21.915,151.057,61.954)
C2': (23.052,152.183,60.214)
C2: (21.713,154.002,56.098)
N1: (20.715,154.880,55.952)
N3: (21.920,153.118,57.066)
N6: (18.756,155.794,56.746)
N7: (19.039,153.812,59.066)
N9: (20.836,152.461,59.141)
O5': (20.170,149.915,63.207)
O3': (23.787,152.499,62.528)
OP2: (19.101,148.151,64.669)
C3': (22.660,152.352,61.672)
C1': (21.812,151.492,59.646)
C5': (20.921,151.142,63.093)
O4': (21.216,150.769,60.713)
C8: (19.662,152.871,59.728)
O2': (24.147,151.322,60.058)
C6: (19.745,154.916,56.887)
C5: (19.844,154.027,57.960)
C4: (20.941,153.185,57.980)
P: (19.264,149.626,64.490)
C4': (21.915,151.057,61.954)
C2': (23.052,152.183,60.214)
C2: (21.713,154.002,56.098)
N1: (20.715,154.880,55.952)
N3: (21.920,153.118,57.066)
N6: (18.756,155.794,56.746)
N7: (19.039,153.812,59.066)
N9: (20.836,152.461,59.141)
O5': (20.170,149.915,63.207)
O3': (23.787,152.499,62.528)
Image (generated by PyMOL):