Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02417:02395
Extra
PDB:
ATOM 1 O3' C A2416 53.418 116.859 142.876 1.00 39.79 O
ATOM 2 P A A2417 53.443 117.214 141.308 1.00 41.75 P
ATOM 3 OP1 A A2417 52.034 117.170 140.835 1.00 41.28 O
ATOM 4 OP2 A A2417 54.468 116.374 140.634 1.00 40.19 O
ATOM 5 O5' A A2417 53.959 118.719 141.271 1.00 38.37 O
ATOM 6 C5' A A2417 53.185 119.776 141.849 1.00 37.67 C
ATOM 7 C4' A A2417 54.003 121.038 141.908 1.00 39.41 C
ATOM 8 O4' A A2417 55.174 120.802 142.732 1.00 39.69 O
ATOM 9 C3' A A2417 54.591 121.505 140.587 1.00 40.31 C
ATOM 10 O3' A A2417 53.634 122.227 139.817 1.00 41.43 O
ATOM 11 C2' A A2417 55.750 122.375 141.052 1.00 39.40 C
ATOM 12 O2' A A2417 55.307 123.632 141.523 1.00 38.71 O
ATOM 13 C1' A A2417 56.265 121.566 142.242 1.00 37.85 C
ATOM 14 N9 A A2417 57.365 120.656 141.918 1.00 36.19 N
ATOM 15 C8 A A2417 57.302 119.341 141.522 1.00 35.95 C
ATOM 16 N7 A A2417 58.476 118.797 141.301 1.00 33.13 N
ATOM 17 C5 A A2417 59.372 119.821 141.570 1.00 33.58 C
ATOM 18 C6 A A2417 60.770 119.889 141.514 1.00 33.35 C
ATOM 19 N6 A A2417 61.550 118.863 141.172 1.00 34.02 N
ATOM 20 N1 A A2417 61.353 121.063 141.830 1.00 32.64 N
ATOM 21 C2 A A2417 60.577 122.086 142.192 1.00 33.45 C
ATOM 22 N3 A A2417 59.256 122.146 142.293 1.00 34.46 N
ATOM 23 C4 A A2417 58.703 120.969 141.957 1.00 34.92 C
ATOM 24 P A A2418 53.655 122.122 138.211 1.00 41.14 P
ATOM 25 OP1 A A2418 52.410 122.745 137.686 1.00 42.12 O
ATOM 26 OP2 A A2418 53.985 120.722 137.845 1.00 39.56 O
ATOM 27 O5' A A2418 54.863 123.061 137.785 1.00 39.30 O
TER
ATOM 1 O3' A B2394 62.867 115.084 135.549 1.00 40.18 O
ATOM 2 P U B2395 62.862 115.808 136.980 1.00 43.34 P
ATOM 3 OP1 U B2395 64.120 115.386 137.650 1.00 42.85 O
ATOM 4 OP2 U B2395 61.553 115.556 137.644 1.00 44.07 O
ATOM 5 O5' U B2395 62.974 117.360 136.643 1.00 39.19 O
ATOM 6 C5' U B2395 64.091 117.872 135.896 1.00 37.70 C
ATOM 7 C4' U B2395 64.773 118.979 136.666 1.00 37.30 C
ATOM 8 O4' U B2395 63.858 120.099 136.819 1.00 36.77 O
ATOM 9 C3' U B2395 65.230 118.621 138.074 1.00 36.95 C
ATOM 10 O3' U B2395 66.341 119.434 138.374 1.00 39.14 O
ATOM 11 C2' U B2395 64.056 119.078 138.926 1.00 36.26 C
ATOM 12 O2' U B2395 64.426 119.381 140.253 1.00 37.21 O
ATOM 13 C1' U B2395 63.633 120.349 138.191 1.00 33.77 C
ATOM 14 N1 U B2395 62.217 120.706 138.356 1.00 32.04 N
ATOM 15 C2 U B2395 61.912 122.019 138.683 1.00 32.92 C
ATOM 16 O2 U B2395 62.766 122.885 138.850 1.00 33.22 O
ATOM 17 N3 U B2395 60.572 122.283 138.807 1.00 29.08 N
ATOM 18 C4 U B2395 59.534 121.392 138.649 1.00 30.20 C
ATOM 19 O4 U B2395 58.381 121.766 138.852 1.00 32.78 O
ATOM 20 C5 U B2395 59.930 120.065 138.315 1.00 29.24 C
ATOM 21 C6 U B2395 61.221 119.773 138.184 1.00 29.93 C
ATOM 22 P C B2396 67.753 118.769 138.713 1.00 42.58 P
ATOM 23 OP1 C B2396 68.349 118.202 137.480 1.00 45.07 O
ATOM 24 OP2 C B2396 67.563 117.897 139.896 1.00 45.41 O
ATOM 25 O5' C B2396 68.599 120.038 139.142 1.00 40.03 O
TER
ATOM 2 P A A2417 53.443 117.214 141.308 1.00 41.75 P
ATOM 3 OP1 A A2417 52.034 117.170 140.835 1.00 41.28 O
ATOM 4 OP2 A A2417 54.468 116.374 140.634 1.00 40.19 O
ATOM 5 O5' A A2417 53.959 118.719 141.271 1.00 38.37 O
ATOM 6 C5' A A2417 53.185 119.776 141.849 1.00 37.67 C
ATOM 7 C4' A A2417 54.003 121.038 141.908 1.00 39.41 C
ATOM 8 O4' A A2417 55.174 120.802 142.732 1.00 39.69 O
ATOM 9 C3' A A2417 54.591 121.505 140.587 1.00 40.31 C
ATOM 10 O3' A A2417 53.634 122.227 139.817 1.00 41.43 O
ATOM 11 C2' A A2417 55.750 122.375 141.052 1.00 39.40 C
ATOM 12 O2' A A2417 55.307 123.632 141.523 1.00 38.71 O
ATOM 13 C1' A A2417 56.265 121.566 142.242 1.00 37.85 C
ATOM 14 N9 A A2417 57.365 120.656 141.918 1.00 36.19 N
ATOM 15 C8 A A2417 57.302 119.341 141.522 1.00 35.95 C
ATOM 16 N7 A A2417 58.476 118.797 141.301 1.00 33.13 N
ATOM 17 C5 A A2417 59.372 119.821 141.570 1.00 33.58 C
ATOM 18 C6 A A2417 60.770 119.889 141.514 1.00 33.35 C
ATOM 19 N6 A A2417 61.550 118.863 141.172 1.00 34.02 N
ATOM 20 N1 A A2417 61.353 121.063 141.830 1.00 32.64 N
ATOM 21 C2 A A2417 60.577 122.086 142.192 1.00 33.45 C
ATOM 22 N3 A A2417 59.256 122.146 142.293 1.00 34.46 N
ATOM 23 C4 A A2417 58.703 120.969 141.957 1.00 34.92 C
ATOM 24 P A A2418 53.655 122.122 138.211 1.00 41.14 P
ATOM 25 OP1 A A2418 52.410 122.745 137.686 1.00 42.12 O
ATOM 26 OP2 A A2418 53.985 120.722 137.845 1.00 39.56 O
ATOM 27 O5' A A2418 54.863 123.061 137.785 1.00 39.30 O
TER
ATOM 1 O3' A B2394 62.867 115.084 135.549 1.00 40.18 O
ATOM 2 P U B2395 62.862 115.808 136.980 1.00 43.34 P
ATOM 3 OP1 U B2395 64.120 115.386 137.650 1.00 42.85 O
ATOM 4 OP2 U B2395 61.553 115.556 137.644 1.00 44.07 O
ATOM 5 O5' U B2395 62.974 117.360 136.643 1.00 39.19 O
ATOM 6 C5' U B2395 64.091 117.872 135.896 1.00 37.70 C
ATOM 7 C4' U B2395 64.773 118.979 136.666 1.00 37.30 C
ATOM 8 O4' U B2395 63.858 120.099 136.819 1.00 36.77 O
ATOM 9 C3' U B2395 65.230 118.621 138.074 1.00 36.95 C
ATOM 10 O3' U B2395 66.341 119.434 138.374 1.00 39.14 O
ATOM 11 C2' U B2395 64.056 119.078 138.926 1.00 36.26 C
ATOM 12 O2' U B2395 64.426 119.381 140.253 1.00 37.21 O
ATOM 13 C1' U B2395 63.633 120.349 138.191 1.00 33.77 C
ATOM 14 N1 U B2395 62.217 120.706 138.356 1.00 32.04 N
ATOM 15 C2 U B2395 61.912 122.019 138.683 1.00 32.92 C
ATOM 16 O2 U B2395 62.766 122.885 138.850 1.00 33.22 O
ATOM 17 N3 U B2395 60.572 122.283 138.807 1.00 29.08 N
ATOM 18 C4 U B2395 59.534 121.392 138.649 1.00 30.20 C
ATOM 19 O4 U B2395 58.381 121.766 138.852 1.00 32.78 O
ATOM 20 C5 U B2395 59.930 120.065 138.315 1.00 29.24 C
ATOM 21 C6 U B2395 61.221 119.773 138.184 1.00 29.93 C
ATOM 22 P C B2396 67.753 118.769 138.713 1.00 42.58 P
ATOM 23 OP1 C B2396 68.349 118.202 137.480 1.00 45.07 O
ATOM 24 OP2 C B2396 67.563 117.897 139.896 1.00 45.41 O
ATOM 25 O5' C B2396 68.599 120.038 139.142 1.00 40.03 O
TER
Atoms:
OP1: (52.034,117.170,140.835)
OP2: (54.468,116.374,140.634)
C3': (54.591,121.505,140.587)
C1': (56.265,121.566,142.242)
C5': (53.185,119.776,141.849)
O4': (55.174,120.802,142.732)
C8: (57.302,119.341,141.522)
O2': (55.307,123.632,141.523)
C6: (60.770,119.889,141.514)
C5: (59.372,119.821,141.570)
C4: (58.703,120.969,141.957)
P: (53.443,117.214,141.308)
C4': (54.003,121.038,141.908)
C2': (55.750,122.375,141.052)
C2: (60.577,122.086,142.192)
N1: (61.353,121.063,141.830)
N3: (59.256,122.146,142.293)
N6: (61.550,118.863,141.172)
N7: (58.476,118.797,141.301)
N9: (57.365,120.656,141.918)
O5': (53.959,118.719,141.271)
O3': (53.634,122.227,139.817)
OP2: (54.468,116.374,140.634)
C3': (54.591,121.505,140.587)
C1': (56.265,121.566,142.242)
C5': (53.185,119.776,141.849)
O4': (55.174,120.802,142.732)
C8: (57.302,119.341,141.522)
O2': (55.307,123.632,141.523)
C6: (60.770,119.889,141.514)
C5: (59.372,119.821,141.570)
C4: (58.703,120.969,141.957)
P: (53.443,117.214,141.308)
C4': (54.003,121.038,141.908)
C2': (55.750,122.375,141.052)
C2: (60.577,122.086,142.192)
N1: (61.353,121.063,141.830)
N3: (59.256,122.146,142.293)
N6: (61.550,118.863,141.172)
N7: (58.476,118.797,141.301)
N9: (57.365,120.656,141.918)
O5': (53.959,118.719,141.271)
O3': (53.634,122.227,139.817)
C4: (59.534,121.392,138.649)
N3: (60.572,122.283,138.807)
OP1: (64.120,115.386,137.650)
OP2: (61.553,115.556,137.644)
C2: (61.912,122.019,138.683)
C1': (63.633,120.349,138.191)
C3': (65.230,118.621,138.074)
O5': (62.974,117.360,136.643)
O4': (63.858,120.099,136.819)
C5': (64.091,117.872,135.896)
P: (62.862,115.808,136.980)
C4': (64.773,118.979,136.666)
C2': (64.056,119.078,138.926)
O2': (64.426,119.381,140.253)
N1: (62.217,120.706,138.356)
O4: (58.381,121.766,138.852)
O2: (62.766,122.885,138.850)
C6: (61.221,119.773,138.184)
C5: (59.930,120.065,138.315)
O3': (66.341,119.434,138.374)
N3: (60.572,122.283,138.807)
OP1: (64.120,115.386,137.650)
OP2: (61.553,115.556,137.644)
C2: (61.912,122.019,138.683)
C1': (63.633,120.349,138.191)
C3': (65.230,118.621,138.074)
O5': (62.974,117.360,136.643)
O4': (63.858,120.099,136.819)
C5': (64.091,117.872,135.896)
P: (62.862,115.808,136.980)
C4': (64.773,118.979,136.666)
C2': (64.056,119.078,138.926)
O2': (64.426,119.381,140.253)
N1: (62.217,120.706,138.356)
O4: (58.381,121.766,138.852)
O2: (62.766,122.885,138.850)
C6: (61.221,119.773,138.184)
C5: (59.930,120.065,138.315)
O3': (66.341,119.434,138.374)
Image (generated by PyMOL):