Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01323:0509
Extra
PDB:
ATOM 1 O3' G A1322 42.730 141.262 70.475 1.00 29.30 O
ATOM 2 P G A1323 42.812 142.248 71.743 1.00 31.88 P
ATOM 3 OP1 G A1323 42.842 143.631 71.192 1.00 31.01 O
ATOM 4 OP2 G A1323 43.873 141.799 72.683 1.00 31.54 O
ATOM 5 O5' G A1323 41.440 142.044 72.513 1.00 31.36 O
ATOM 6 C5' G A1323 40.218 142.543 71.976 1.00 30.46 C
ATOM 7 C4' G A1323 39.066 142.078 72.818 1.00 30.14 C
ATOM 8 O4' G A1323 39.104 140.629 72.889 1.00 29.86 O
ATOM 9 C3' G A1323 39.093 142.496 74.278 1.00 28.85 C
ATOM 10 O3' G A1323 38.623 143.816 74.463 1.00 30.46 O
ATOM 11 C2' G A1323 38.173 141.460 74.898 1.00 29.74 C
ATOM 12 O2' G A1323 36.815 141.696 74.585 1.00 27.66 O
ATOM 13 C1' G A1323 38.629 140.205 74.156 1.00 29.98 C
ATOM 14 N9 G A1323 39.714 139.526 74.860 1.00 31.09 N
ATOM 15 C8 G A1323 41.066 139.588 74.600 1.00 30.84 C
ATOM 16 N7 G A1323 41.780 138.873 75.428 1.00 30.43 N
ATOM 17 C5 G A1323 40.845 138.303 76.281 1.00 31.74 C
ATOM 18 C6 G A1323 41.016 137.423 77.383 1.00 31.79 C
ATOM 19 O6 G A1323 42.065 136.967 77.847 1.00 31.16 O
ATOM 20 N1 G A1323 39.795 137.085 77.960 1.00 30.22 N
ATOM 21 C2 G A1323 38.570 137.539 77.536 1.00 29.03 C
ATOM 22 N2 G A1323 37.506 137.115 78.217 1.00 29.06 N
ATOM 23 N3 G A1323 38.398 138.354 76.519 1.00 29.21 N
ATOM 24 C4 G A1323 39.567 138.694 75.941 1.00 30.96 C
ATOM 25 P C A1324 39.128 144.674 75.725 1.00 31.24 P
ATOM 26 OP1 C A1324 38.494 146.009 75.607 1.00 33.26 O
ATOM 27 OP2 C A1324 40.598 144.574 75.844 1.00 33.87 O
ATOM 28 O5' C A1324 38.507 143.916 76.976 1.00 33.01 O
TER
ATOM 1 O3' A B 508 28.130 134.924 79.159 1.00 30.90 O
ATOM 2 P A B 509 28.174 135.902 80.434 1.00 32.91 P
ATOM 3 OP1 A B 509 27.693 135.121 81.597 1.00 32.88 O
ATOM 4 OP2 A B 509 27.529 137.200 80.097 1.00 33.50 O
ATOM 5 O5' A B 509 29.720 136.185 80.666 1.00 34.17 O
ATOM 6 C5' A B 509 30.645 135.117 80.915 1.00 31.95 C
ATOM 7 C4' A B 509 32.059 135.635 80.839 1.00 31.30 C
ATOM 8 O4' A B 509 32.340 136.090 79.490 1.00 31.36 O
ATOM 9 C3' A B 509 32.356 136.870 81.676 1.00 30.03 C
ATOM 10 O3' A B 509 32.595 136.533 83.039 1.00 30.70 O
ATOM 11 C2' A B 509 33.630 137.378 81.019 1.00 29.83 C
ATOM 12 O2' A B 509 34.763 136.662 81.446 1.00 30.65 O
ATOM 13 C1' A B 509 33.368 137.063 79.541 1.00 30.05 C
ATOM 14 N9 A B 509 32.960 138.252 78.795 1.00 30.25 N
ATOM 15 C8 A B 509 31.794 138.971 78.899 1.00 30.30 C
ATOM 16 N7 A B 509 31.786 140.070 78.185 1.00 30.13 N
ATOM 17 C5 A B 509 33.015 140.057 77.539 1.00 30.30 C
ATOM 18 C6 A B 509 33.632 140.960 76.650 1.00 28.77 C
ATOM 19 N6 A B 509 33.071 142.102 76.244 1.00 28.52 N
ATOM 20 N1 A B 509 34.864 140.649 76.193 1.00 27.15 N
ATOM 21 C2 A B 509 35.429 139.514 76.601 1.00 26.78 C
ATOM 22 N3 A B 509 34.958 138.591 77.435 1.00 30.60 N
ATOM 23 C4 A B 509 33.734 138.927 77.879 1.00 30.03 C
ATOM 24 P U B 510 31.733 137.229 84.201 1.00 32.92 P
ATOM 25 OP1 U B 510 32.341 136.862 85.498 1.00 33.89 O
ATOM 26 OP2 U B 510 30.298 136.941 83.963 1.00 33.09 O
ATOM 27 O5' U B 510 31.982 138.782 83.984 1.00 30.79 O
TER
ATOM 2 P G A1323 42.812 142.248 71.743 1.00 31.88 P
ATOM 3 OP1 G A1323 42.842 143.631 71.192 1.00 31.01 O
ATOM 4 OP2 G A1323 43.873 141.799 72.683 1.00 31.54 O
ATOM 5 O5' G A1323 41.440 142.044 72.513 1.00 31.36 O
ATOM 6 C5' G A1323 40.218 142.543 71.976 1.00 30.46 C
ATOM 7 C4' G A1323 39.066 142.078 72.818 1.00 30.14 C
ATOM 8 O4' G A1323 39.104 140.629 72.889 1.00 29.86 O
ATOM 9 C3' G A1323 39.093 142.496 74.278 1.00 28.85 C
ATOM 10 O3' G A1323 38.623 143.816 74.463 1.00 30.46 O
ATOM 11 C2' G A1323 38.173 141.460 74.898 1.00 29.74 C
ATOM 12 O2' G A1323 36.815 141.696 74.585 1.00 27.66 O
ATOM 13 C1' G A1323 38.629 140.205 74.156 1.00 29.98 C
ATOM 14 N9 G A1323 39.714 139.526 74.860 1.00 31.09 N
ATOM 15 C8 G A1323 41.066 139.588 74.600 1.00 30.84 C
ATOM 16 N7 G A1323 41.780 138.873 75.428 1.00 30.43 N
ATOM 17 C5 G A1323 40.845 138.303 76.281 1.00 31.74 C
ATOM 18 C6 G A1323 41.016 137.423 77.383 1.00 31.79 C
ATOM 19 O6 G A1323 42.065 136.967 77.847 1.00 31.16 O
ATOM 20 N1 G A1323 39.795 137.085 77.960 1.00 30.22 N
ATOM 21 C2 G A1323 38.570 137.539 77.536 1.00 29.03 C
ATOM 22 N2 G A1323 37.506 137.115 78.217 1.00 29.06 N
ATOM 23 N3 G A1323 38.398 138.354 76.519 1.00 29.21 N
ATOM 24 C4 G A1323 39.567 138.694 75.941 1.00 30.96 C
ATOM 25 P C A1324 39.128 144.674 75.725 1.00 31.24 P
ATOM 26 OP1 C A1324 38.494 146.009 75.607 1.00 33.26 O
ATOM 27 OP2 C A1324 40.598 144.574 75.844 1.00 33.87 O
ATOM 28 O5' C A1324 38.507 143.916 76.976 1.00 33.01 O
TER
ATOM 1 O3' A B 508 28.130 134.924 79.159 1.00 30.90 O
ATOM 2 P A B 509 28.174 135.902 80.434 1.00 32.91 P
ATOM 3 OP1 A B 509 27.693 135.121 81.597 1.00 32.88 O
ATOM 4 OP2 A B 509 27.529 137.200 80.097 1.00 33.50 O
ATOM 5 O5' A B 509 29.720 136.185 80.666 1.00 34.17 O
ATOM 6 C5' A B 509 30.645 135.117 80.915 1.00 31.95 C
ATOM 7 C4' A B 509 32.059 135.635 80.839 1.00 31.30 C
ATOM 8 O4' A B 509 32.340 136.090 79.490 1.00 31.36 O
ATOM 9 C3' A B 509 32.356 136.870 81.676 1.00 30.03 C
ATOM 10 O3' A B 509 32.595 136.533 83.039 1.00 30.70 O
ATOM 11 C2' A B 509 33.630 137.378 81.019 1.00 29.83 C
ATOM 12 O2' A B 509 34.763 136.662 81.446 1.00 30.65 O
ATOM 13 C1' A B 509 33.368 137.063 79.541 1.00 30.05 C
ATOM 14 N9 A B 509 32.960 138.252 78.795 1.00 30.25 N
ATOM 15 C8 A B 509 31.794 138.971 78.899 1.00 30.30 C
ATOM 16 N7 A B 509 31.786 140.070 78.185 1.00 30.13 N
ATOM 17 C5 A B 509 33.015 140.057 77.539 1.00 30.30 C
ATOM 18 C6 A B 509 33.632 140.960 76.650 1.00 28.77 C
ATOM 19 N6 A B 509 33.071 142.102 76.244 1.00 28.52 N
ATOM 20 N1 A B 509 34.864 140.649 76.193 1.00 27.15 N
ATOM 21 C2 A B 509 35.429 139.514 76.601 1.00 26.78 C
ATOM 22 N3 A B 509 34.958 138.591 77.435 1.00 30.60 N
ATOM 23 C4 A B 509 33.734 138.927 77.879 1.00 30.03 C
ATOM 24 P U B 510 31.733 137.229 84.201 1.00 32.92 P
ATOM 25 OP1 U B 510 32.341 136.862 85.498 1.00 33.89 O
ATOM 26 OP2 U B 510 30.298 136.941 83.963 1.00 33.09 O
ATOM 27 O5' U B 510 31.982 138.782 83.984 1.00 30.79 O
TER
Atoms:
OP1: (42.842,143.631,71.192)
OP2: (43.873,141.799,72.683)
C3': (39.093,142.496,74.278)
C1': (38.629,140.205,74.156)
C5': (40.218,142.543,71.976)
O6: (42.065,136.967,77.847)
O4': (39.104,140.629,72.889)
C8: (41.066,139.588,74.600)
C2: (38.570,137.539,77.536)
C6: (41.016,137.423,77.383)
C5: (40.845,138.303,76.281)
C4: (39.567,138.694,75.941)
P: (42.812,142.248,71.743)
C4': (39.066,142.078,72.818)
C2': (38.173,141.460,74.898)
O2': (36.815,141.696,74.585)
N1: (39.795,137.085,77.960)
N2: (37.506,137.115,78.217)
N3: (38.398,138.354,76.519)
N7: (41.780,138.873,75.428)
N9: (39.714,139.526,74.860)
O5': (41.440,142.044,72.513)
O3': (38.623,143.816,74.463)
OP2: (43.873,141.799,72.683)
C3': (39.093,142.496,74.278)
C1': (38.629,140.205,74.156)
C5': (40.218,142.543,71.976)
O6: (42.065,136.967,77.847)
O4': (39.104,140.629,72.889)
C8: (41.066,139.588,74.600)
C2: (38.570,137.539,77.536)
C6: (41.016,137.423,77.383)
C5: (40.845,138.303,76.281)
C4: (39.567,138.694,75.941)
P: (42.812,142.248,71.743)
C4': (39.066,142.078,72.818)
C2': (38.173,141.460,74.898)
O2': (36.815,141.696,74.585)
N1: (39.795,137.085,77.960)
N2: (37.506,137.115,78.217)
N3: (38.398,138.354,76.519)
N7: (41.780,138.873,75.428)
N9: (39.714,139.526,74.860)
O5': (41.440,142.044,72.513)
O3': (38.623,143.816,74.463)
OP1: (27.693,135.121,81.597)
OP2: (27.529,137.200,80.097)
C3': (32.356,136.870,81.676)
C1': (33.368,137.063,79.541)
C5': (30.645,135.117,80.915)
O4': (32.340,136.090,79.490)
C8: (31.794,138.971,78.899)
O2': (34.763,136.662,81.446)
C6: (33.632,140.960,76.650)
C5: (33.015,140.057,77.539)
C4: (33.734,138.927,77.879)
P: (28.174,135.902,80.434)
C4': (32.059,135.635,80.839)
C2': (33.630,137.378,81.019)
C2: (35.429,139.514,76.601)
N1: (34.864,140.649,76.193)
N3: (34.958,138.591,77.435)
N6: (33.071,142.102,76.244)
N7: (31.786,140.070,78.185)
N9: (32.960,138.252,78.795)
O5': (29.720,136.185,80.666)
O3': (32.595,136.533,83.039)
OP2: (27.529,137.200,80.097)
C3': (32.356,136.870,81.676)
C1': (33.368,137.063,79.541)
C5': (30.645,135.117,80.915)
O4': (32.340,136.090,79.490)
C8: (31.794,138.971,78.899)
O2': (34.763,136.662,81.446)
C6: (33.632,140.960,76.650)
C5: (33.015,140.057,77.539)
C4: (33.734,138.927,77.879)
P: (28.174,135.902,80.434)
C4': (32.059,135.635,80.839)
C2': (33.630,137.378,81.019)
C2: (35.429,139.514,76.601)
N1: (34.864,140.649,76.193)
N3: (34.958,138.591,77.435)
N6: (33.071,142.102,76.244)
N7: (31.786,140.070,78.185)
N9: (32.960,138.252,78.795)
O5': (29.720,136.185,80.666)
O3': (32.595,136.533,83.039)
Image (generated by PyMOL):