Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02418:02395
Extra
PDB:
ATOM 1 O3' A A2417 53.634 122.227 139.817 1.00 41.43 O
ATOM 2 P A A2418 53.655 122.122 138.211 1.00 41.14 P
ATOM 3 OP1 A A2418 52.410 122.745 137.686 1.00 42.12 O
ATOM 4 OP2 A A2418 53.985 120.722 137.845 1.00 39.56 O
ATOM 5 O5' A A2418 54.863 123.061 137.785 1.00 39.30 O
ATOM 6 C5' A A2418 54.959 124.392 138.308 1.00 39.08 C
ATOM 7 C4' A A2418 55.532 125.319 137.271 1.00 39.64 C
ATOM 8 O4' A A2418 56.881 124.886 136.965 1.00 38.73 O
ATOM 9 C3' A A2418 54.784 125.373 135.944 1.00 40.04 C
ATOM 10 O3' A A2418 54.834 126.698 135.411 1.00 41.18 O
ATOM 11 C2' A A2418 55.552 124.375 135.082 1.00 39.28 C
ATOM 12 O2' A A2418 55.483 124.695 133.705 1.00 41.01 O
ATOM 13 C1' A A2418 56.981 124.542 135.601 1.00 36.57 C
ATOM 14 N9 A A2418 57.817 123.343 135.513 1.00 33.83 N
ATOM 15 C8 A A2418 57.437 122.025 135.422 1.00 32.58 C
ATOM 16 N7 A A2418 58.444 121.187 135.371 1.00 30.71 N
ATOM 17 C5 A A2418 59.563 122.005 135.424 1.00 33.02 C
ATOM 18 C6 A A2418 60.945 121.728 135.388 1.00 34.42 C
ATOM 19 N6 A A2418 61.455 120.504 135.255 1.00 34.37 N
ATOM 20 N1 A A2418 61.797 122.772 135.477 1.00 34.73 N
ATOM 21 C2 A A2418 61.288 124.008 135.567 1.00 35.31 C
ATOM 22 N3 A A2418 60.014 124.398 135.590 1.00 35.33 N
ATOM 23 C4 A A2418 59.191 123.335 135.518 1.00 34.75 C
ATOM 24 P G A2419 53.469 127.417 134.944 1.00 44.37 P
ATOM 25 OP1 G A2419 52.314 126.683 135.534 1.00 42.85 O
ATOM 26 OP2 G A2419 53.530 127.629 133.471 1.00 47.41 O
ATOM 27 O5' G A2419 53.526 128.857 135.616 1.00 43.62 O
TER
ATOM 1 O3' A B2394 62.867 115.084 135.549 1.00 40.18 O
ATOM 2 P U B2395 62.862 115.808 136.980 1.00 43.34 P
ATOM 3 OP1 U B2395 64.120 115.386 137.650 1.00 42.85 O
ATOM 4 OP2 U B2395 61.553 115.556 137.644 1.00 44.07 O
ATOM 5 O5' U B2395 62.974 117.360 136.643 1.00 39.19 O
ATOM 6 C5' U B2395 64.091 117.872 135.896 1.00 37.70 C
ATOM 7 C4' U B2395 64.773 118.979 136.666 1.00 37.30 C
ATOM 8 O4' U B2395 63.858 120.099 136.819 1.00 36.77 O
ATOM 9 C3' U B2395 65.230 118.621 138.074 1.00 36.95 C
ATOM 10 O3' U B2395 66.341 119.434 138.374 1.00 39.14 O
ATOM 11 C2' U B2395 64.056 119.078 138.926 1.00 36.26 C
ATOM 12 O2' U B2395 64.426 119.381 140.253 1.00 37.21 O
ATOM 13 C1' U B2395 63.633 120.349 138.191 1.00 33.77 C
ATOM 14 N1 U B2395 62.217 120.706 138.356 1.00 32.04 N
ATOM 15 C2 U B2395 61.912 122.019 138.683 1.00 32.92 C
ATOM 16 O2 U B2395 62.766 122.885 138.850 1.00 33.22 O
ATOM 17 N3 U B2395 60.572 122.283 138.807 1.00 29.08 N
ATOM 18 C4 U B2395 59.534 121.392 138.649 1.00 30.20 C
ATOM 19 O4 U B2395 58.381 121.766 138.852 1.00 32.78 O
ATOM 20 C5 U B2395 59.930 120.065 138.315 1.00 29.24 C
ATOM 21 C6 U B2395 61.221 119.773 138.184 1.00 29.93 C
ATOM 22 P C B2396 67.753 118.769 138.713 1.00 42.58 P
ATOM 23 OP1 C B2396 68.349 118.202 137.480 1.00 45.07 O
ATOM 24 OP2 C B2396 67.563 117.897 139.896 1.00 45.41 O
ATOM 25 O5' C B2396 68.599 120.038 139.142 1.00 40.03 O
TER
ATOM 2 P A A2418 53.655 122.122 138.211 1.00 41.14 P
ATOM 3 OP1 A A2418 52.410 122.745 137.686 1.00 42.12 O
ATOM 4 OP2 A A2418 53.985 120.722 137.845 1.00 39.56 O
ATOM 5 O5' A A2418 54.863 123.061 137.785 1.00 39.30 O
ATOM 6 C5' A A2418 54.959 124.392 138.308 1.00 39.08 C
ATOM 7 C4' A A2418 55.532 125.319 137.271 1.00 39.64 C
ATOM 8 O4' A A2418 56.881 124.886 136.965 1.00 38.73 O
ATOM 9 C3' A A2418 54.784 125.373 135.944 1.00 40.04 C
ATOM 10 O3' A A2418 54.834 126.698 135.411 1.00 41.18 O
ATOM 11 C2' A A2418 55.552 124.375 135.082 1.00 39.28 C
ATOM 12 O2' A A2418 55.483 124.695 133.705 1.00 41.01 O
ATOM 13 C1' A A2418 56.981 124.542 135.601 1.00 36.57 C
ATOM 14 N9 A A2418 57.817 123.343 135.513 1.00 33.83 N
ATOM 15 C8 A A2418 57.437 122.025 135.422 1.00 32.58 C
ATOM 16 N7 A A2418 58.444 121.187 135.371 1.00 30.71 N
ATOM 17 C5 A A2418 59.563 122.005 135.424 1.00 33.02 C
ATOM 18 C6 A A2418 60.945 121.728 135.388 1.00 34.42 C
ATOM 19 N6 A A2418 61.455 120.504 135.255 1.00 34.37 N
ATOM 20 N1 A A2418 61.797 122.772 135.477 1.00 34.73 N
ATOM 21 C2 A A2418 61.288 124.008 135.567 1.00 35.31 C
ATOM 22 N3 A A2418 60.014 124.398 135.590 1.00 35.33 N
ATOM 23 C4 A A2418 59.191 123.335 135.518 1.00 34.75 C
ATOM 24 P G A2419 53.469 127.417 134.944 1.00 44.37 P
ATOM 25 OP1 G A2419 52.314 126.683 135.534 1.00 42.85 O
ATOM 26 OP2 G A2419 53.530 127.629 133.471 1.00 47.41 O
ATOM 27 O5' G A2419 53.526 128.857 135.616 1.00 43.62 O
TER
ATOM 1 O3' A B2394 62.867 115.084 135.549 1.00 40.18 O
ATOM 2 P U B2395 62.862 115.808 136.980 1.00 43.34 P
ATOM 3 OP1 U B2395 64.120 115.386 137.650 1.00 42.85 O
ATOM 4 OP2 U B2395 61.553 115.556 137.644 1.00 44.07 O
ATOM 5 O5' U B2395 62.974 117.360 136.643 1.00 39.19 O
ATOM 6 C5' U B2395 64.091 117.872 135.896 1.00 37.70 C
ATOM 7 C4' U B2395 64.773 118.979 136.666 1.00 37.30 C
ATOM 8 O4' U B2395 63.858 120.099 136.819 1.00 36.77 O
ATOM 9 C3' U B2395 65.230 118.621 138.074 1.00 36.95 C
ATOM 10 O3' U B2395 66.341 119.434 138.374 1.00 39.14 O
ATOM 11 C2' U B2395 64.056 119.078 138.926 1.00 36.26 C
ATOM 12 O2' U B2395 64.426 119.381 140.253 1.00 37.21 O
ATOM 13 C1' U B2395 63.633 120.349 138.191 1.00 33.77 C
ATOM 14 N1 U B2395 62.217 120.706 138.356 1.00 32.04 N
ATOM 15 C2 U B2395 61.912 122.019 138.683 1.00 32.92 C
ATOM 16 O2 U B2395 62.766 122.885 138.850 1.00 33.22 O
ATOM 17 N3 U B2395 60.572 122.283 138.807 1.00 29.08 N
ATOM 18 C4 U B2395 59.534 121.392 138.649 1.00 30.20 C
ATOM 19 O4 U B2395 58.381 121.766 138.852 1.00 32.78 O
ATOM 20 C5 U B2395 59.930 120.065 138.315 1.00 29.24 C
ATOM 21 C6 U B2395 61.221 119.773 138.184 1.00 29.93 C
ATOM 22 P C B2396 67.753 118.769 138.713 1.00 42.58 P
ATOM 23 OP1 C B2396 68.349 118.202 137.480 1.00 45.07 O
ATOM 24 OP2 C B2396 67.563 117.897 139.896 1.00 45.41 O
ATOM 25 O5' C B2396 68.599 120.038 139.142 1.00 40.03 O
TER
Atoms:
OP1: (52.410,122.745,137.686)
OP2: (53.985,120.722,137.845)
C3': (54.784,125.373,135.944)
C1': (56.981,124.542,135.601)
C5': (54.959,124.392,138.308)
O4': (56.881,124.886,136.965)
C8: (57.437,122.025,135.422)
O2': (55.483,124.695,133.705)
C6: (60.945,121.728,135.388)
C5: (59.563,122.005,135.424)
C4: (59.191,123.335,135.518)
P: (53.655,122.122,138.211)
C4': (55.532,125.319,137.271)
C2': (55.552,124.375,135.082)
C2: (61.288,124.008,135.567)
N1: (61.797,122.772,135.477)
N3: (60.014,124.398,135.590)
N6: (61.455,120.504,135.255)
N7: (58.444,121.187,135.371)
N9: (57.817,123.343,135.513)
O5': (54.863,123.061,137.785)
O3': (54.834,126.698,135.411)
OP2: (53.985,120.722,137.845)
C3': (54.784,125.373,135.944)
C1': (56.981,124.542,135.601)
C5': (54.959,124.392,138.308)
O4': (56.881,124.886,136.965)
C8: (57.437,122.025,135.422)
O2': (55.483,124.695,133.705)
C6: (60.945,121.728,135.388)
C5: (59.563,122.005,135.424)
C4: (59.191,123.335,135.518)
P: (53.655,122.122,138.211)
C4': (55.532,125.319,137.271)
C2': (55.552,124.375,135.082)
C2: (61.288,124.008,135.567)
N1: (61.797,122.772,135.477)
N3: (60.014,124.398,135.590)
N6: (61.455,120.504,135.255)
N7: (58.444,121.187,135.371)
N9: (57.817,123.343,135.513)
O5': (54.863,123.061,137.785)
O3': (54.834,126.698,135.411)
C4: (59.534,121.392,138.649)
N3: (60.572,122.283,138.807)
OP1: (64.120,115.386,137.650)
OP2: (61.553,115.556,137.644)
C2: (61.912,122.019,138.683)
C1': (63.633,120.349,138.191)
C3': (65.230,118.621,138.074)
O5': (62.974,117.360,136.643)
O4': (63.858,120.099,136.819)
C5': (64.091,117.872,135.896)
P: (62.862,115.808,136.980)
C4': (64.773,118.979,136.666)
C2': (64.056,119.078,138.926)
O2': (64.426,119.381,140.253)
N1: (62.217,120.706,138.356)
O4: (58.381,121.766,138.852)
O2: (62.766,122.885,138.850)
C6: (61.221,119.773,138.184)
C5: (59.930,120.065,138.315)
O3': (66.341,119.434,138.374)
N3: (60.572,122.283,138.807)
OP1: (64.120,115.386,137.650)
OP2: (61.553,115.556,137.644)
C2: (61.912,122.019,138.683)
C1': (63.633,120.349,138.191)
C3': (65.230,118.621,138.074)
O5': (62.974,117.360,136.643)
O4': (63.858,120.099,136.819)
C5': (64.091,117.872,135.896)
P: (62.862,115.808,136.980)
C4': (64.773,118.979,136.666)
C2': (64.056,119.078,138.926)
O2': (64.426,119.381,140.253)
N1: (62.217,120.706,138.356)
O4: (58.381,121.766,138.852)
O2: (62.766,122.885,138.850)
C6: (61.221,119.773,138.184)
C5: (59.930,120.065,138.315)
O3': (66.341,119.434,138.374)
Image (generated by PyMOL):