ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01059:01066

Extra

PDB:
ATOM 1 O3' G A1058 26.705 99.390 116.437 1.00 42.28 O
ATOM 2 P G A1059 26.410 99.286 118.012 1.00 45.14 P
ATOM 3 OP1 G A1059 27.515 99.980 118.717 1.00 45.73 O
ATOM 4 OP2 G A1059 26.112 97.868 118.336 1.00 45.60 O
ATOM 5 O5' G A1059 25.079 100.137 118.225 1.00 42.33 O
ATOM 6 C5' G A1059 25.132 101.569 118.219 1.00 40.23 C
ATOM 7 C4' G A1059 23.757 102.155 118.018 1.00 38.98 C
ATOM 8 O4' G A1059 23.041 101.359 117.040 1.00 38.39 O
ATOM 9 C3' G A1059 22.805 102.161 119.198 1.00 38.80 C
ATOM 10 O3' G A1059 23.095 103.224 120.102 1.00 39.72 O
ATOM 11 C2' G A1059 21.473 102.365 118.488 1.00 37.74 C
ATOM 12 O2' G A1059 21.338 103.671 117.977 1.00 37.29 O
ATOM 13 C1' G A1059 21.647 101.448 117.285 1.00 36.89 C
ATOM 14 N9 G A1059 21.124 100.109 117.527 1.00 36.29 N
ATOM 15 C8 G A1059 21.825 98.930 117.541 1.00 35.42 C
ATOM 16 N7 G A1059 21.072 97.892 117.776 1.00 36.32 N
ATOM 17 C5 G A1059 19.797 98.418 117.925 1.00 37.07 C
ATOM 18 C6 G A1059 18.560 97.773 118.185 1.00 37.67 C
ATOM 19 O6 G A1059 18.336 96.567 118.329 1.00 39.04 O
ATOM 20 N1 G A1059 17.515 98.685 118.266 1.00 36.14 N
ATOM 21 C2 G A1059 17.638 100.037 118.113 1.00 36.27 C
ATOM 22 N2 G A1059 16.512 100.743 118.235 1.00 35.85 N
ATOM 23 N3 G A1059 18.782 100.652 117.862 1.00 37.39 N
ATOM 24 C4 G A1059 19.813 99.785 117.781 1.00 36.84 C
ATOM 25 P U A1060 22.592 103.136 121.629 1.00 38.69 P
ATOM 26 OP1 U A1060 23.177 104.307 122.318 1.00 39.60 O
ATOM 27 OP2 U A1060 22.847 101.769 122.159 1.00 38.86 O
ATOM 28 O5' U A1060 21.018 103.352 121.536 1.00 38.34 O
TER

ATOM 1 O3' A B1065 12.381 108.284 116.389 1.00 39.99 O
ATOM 2 P A B1066 12.061 108.726 117.891 1.00 42.77 P
ATOM 3 OP1 A B1066 10.692 109.308 117.910 1.00 42.25 O
ATOM 4 OP2 A B1066 13.208 109.535 118.388 1.00 41.38 O
ATOM 5 O5' A B1066 12.042 107.340 118.670 1.00 40.45 O
ATOM 6 C5' A B1066 11.221 106.256 118.217 1.00 39.56 C
ATOM 7 C4' A B1066 11.910 104.949 118.491 1.00 41.33 C
ATOM 8 O4' A B1066 13.126 104.883 117.704 1.00 42.04 O
ATOM 9 C3' A B1066 12.374 104.761 119.928 1.00 41.46 C
ATOM 10 O3' A B1066 11.319 104.234 120.726 1.00 41.83 O
ATOM 11 C2' A B1066 13.509 103.757 119.770 1.00 42.07 C
ATOM 12 O2' A B1066 13.045 102.427 119.653 1.00 42.04 O
ATOM 13 C1' A B1066 14.126 104.199 118.437 1.00 41.12 C
ATOM 14 N9 A B1066 15.276 105.092 118.584 1.00 39.94 N
ATOM 15 C8 A B1066 15.318 106.342 119.150 1.00 39.59 C
ATOM 16 N7 A B1066 16.512 106.879 119.152 1.00 38.49 N
ATOM 17 C5 A B1066 17.308 105.922 118.541 1.00 38.31 C
ATOM 18 C6 A B1066 18.680 105.881 118.241 1.00 37.64 C
ATOM 19 N6 A B1066 19.536 106.865 118.531 1.00 36.78 N
ATOM 20 N1 A B1066 19.153 104.778 117.626 1.00 36.50 N
ATOM 21 C2 A B1066 18.306 103.792 117.340 1.00 36.56 C
ATOM 22 N3 A B1066 17.002 103.711 117.571 1.00 38.85 N
ATOM 23 C4 A B1066 16.559 104.821 118.180 1.00 38.61 C
ATOM 24 P G B1067 10.718 105.092 121.949 1.00 41.55 P
ATOM 25 OP1 G B1067 9.643 104.240 122.502 1.00 42.42 O
ATOM 26 OP2 G B1067 10.406 106.481 121.525 1.00 41.12 O
ATOM 27 O5' G B1067 11.892 105.137 123.019 1.00 39.59 O
TER

Atoms:
OP1: (27.515,99.980,118.717)
OP2: (26.112,97.868,118.336)
C3': (22.805,102.161,119.198)
C1': (21.647,101.448,117.285)
C5': (25.132,101.569,118.219)
O6: (18.336,96.567,118.329)
O4': (23.041,101.359,117.040)
C8: (21.825,98.930,117.541)
C2: (17.638,100.037,118.113)
C6: (18.560,97.773,118.185)
C5: (19.797,98.418,117.925)
C4: (19.813,99.785,117.781)
P: (26.410,99.286,118.012)
C4': (23.757,102.155,118.018)
C2': (21.473,102.365,118.488)
O2': (21.338,103.671,117.977)
N1: (17.515,98.685,118.266)
N2: (16.512,100.743,118.235)
N3: (18.782,100.652,117.862)
N7: (21.072,97.892,117.776)
N9: (21.124,100.109,117.527)
O5': (25.079,100.137,118.225)
O3': (23.095,103.224,120.102)
OP1: (10.692,109.308,117.910)
OP2: (13.208,109.535,118.388)
C3': (12.374,104.761,119.928)
C1': (14.126,104.199,118.437)
C5': (11.221,106.256,118.217)
O4': (13.126,104.883,117.704)
C8: (15.318,106.342,119.150)
O2': (13.045,102.427,119.653)
C6: (18.680,105.881,118.241)
C5: (17.308,105.922,118.541)
C4: (16.559,104.821,118.180)
P: (12.061,108.726,117.891)
C4': (11.910,104.949,118.491)
C2': (13.509,103.757,119.770)
C2: (18.306,103.792,117.340)
N1: (19.153,104.778,117.626)
N3: (17.002,103.711,117.571)
N6: (19.536,106.865,118.531)
N7: (16.512,106.879,119.152)
N9: (15.276,105.092,118.584)
O5': (12.042,107.340,118.670)
O3': (11.319,104.234,120.726)
Image (generated by PyMOL):
PyMOL image
show in jmol