Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MMS:C4:C34
Extra
PDB:
ATOM 1 O3' G A 3 4.352 -13.378 6.946 1.00 61.66 O
ATOM 2 P G A 4 3.878 -12.469 5.704 1.00 66.88 P
ATOM 3 OP1 G A 4 2.452 -12.820 5.440 1.00 64.70 O
ATOM 4 OP2 G A 4 4.889 -12.575 4.612 1.00 48.03 O
ATOM 5 O5' G A 4 3.943 -10.971 6.248 1.00 63.61 O
ATOM 6 C5' G A 4 3.012 -10.512 7.237 1.00 53.95 C
ATOM 7 C4' G A 4 3.371 -9.125 7.706 1.00 46.33 C
ATOM 8 O4' G A 4 4.737 -9.107 8.201 1.00 45.69 O
ATOM 9 C3' G A 4 3.363 -8.001 6.687 1.00 40.52 C
ATOM 10 O3' G A 4 2.066 -7.500 6.421 1.00 47.06 O
ATOM 11 C2' G A 4 4.212 -6.943 7.377 1.00 42.04 C
ATOM 12 O2' G A 4 3.475 -6.224 8.348 1.00 43.70 O
ATOM 13 C1' G A 4 5.264 -7.798 8.076 1.00 31.41 C
ATOM 14 N9 G A 4 6.501 -7.839 7.307 1.00 24.39 N
ATOM 15 C8 G A 4 7.026 -8.888 6.592 1.00 29.37 C
ATOM 16 N7 G A 4 8.158 -8.591 6.005 1.00 32.88 N
ATOM 17 C5 G A 4 8.388 -7.266 6.352 1.00 23.47 C
ATOM 18 C6 G A 4 9.458 -6.393 6.013 1.00 28.67 C
ATOM 19 O6 G A 4 10.450 -6.622 5.314 1.00 27.35 O
ATOM 20 N1 G A 4 9.292 -5.136 6.584 1.00 24.95 N
ATOM 21 C2 G A 4 8.235 -4.763 7.377 1.00 26.92 C
ATOM 22 N2 G A 4 8.255 -3.513 7.838 1.00 28.71 N
ATOM 23 N3 G A 4 7.234 -5.561 7.696 1.00 22.90 N
ATOM 24 C4 G A 4 7.375 -6.789 7.155 1.00 29.13 C
ATOM 25 P G A 5 1.758 -6.834 4.989 1.00 49.25 P
ATOM 26 OP1 G A 5 0.428 -6.158 5.065 1.00 37.09 O
ATOM 27 OP2 G A 5 1.991 -7.883 3.963 1.00 42.81 O
ATOM 28 O5' G A 5 2.899 -5.734 4.819 1.00 32.92 O
TER
ATOM 1 O3' A B 33 6.308 1.611 15.926 1.00 35.76 O
ATOM 2 P A B 34 5.839 2.793 14.965 1.00 32.91 P
ATOM 3 OP1 A B 34 6.554 4.030 15.366 1.00 36.15 O
ATOM 4 OP2 A B 34 4.351 2.768 14.939 1.00 23.95 O
ATOM 5 O5' A B 34 6.414 2.342 13.557 1.00 34.02 O
ATOM 6 C5' A B 34 7.826 2.172 13.384 1.00 35.68 C
ATOM 7 C4' A B 34 8.100 1.383 12.136 1.00 40.49 C
ATOM 8 O4' A B 34 7.592 0.035 12.283 1.00 46.64 O
ATOM 9 C3' A B 34 7.426 1.921 10.889 1.00 37.28 C
ATOM 10 O3' A B 34 8.249 2.933 10.322 1.00 38.08 O
ATOM 11 C2' A B 34 7.311 0.685 10.002 1.00 36.45 C
ATOM 12 O2' A B 34 8.496 0.425 9.278 1.00 44.66 O
ATOM 13 C1' A B 34 7.122 -0.432 11.032 1.00 36.77 C
ATOM 14 N9 A B 34 5.743 -0.875 11.198 1.00 24.80 N
ATOM 15 C8 A B 34 4.754 -0.265 11.923 1.00 28.92 C
ATOM 16 N7 A B 34 3.606 -0.896 11.888 1.00 28.93 N
ATOM 17 C5 A B 34 3.857 -2.000 11.087 1.00 22.34 C
ATOM 18 C6 A B 34 3.040 -3.060 10.664 1.00 26.52 C
ATOM 19 N6 A B 34 1.749 -3.175 11.000 1.00 26.24 N
ATOM 20 N1 A B 34 3.596 -4.006 9.874 1.00 25.01 N
ATOM 21 C2 A B 34 4.889 -3.875 9.532 1.00 27.90 C
ATOM 22 N3 A B 34 5.758 -2.920 9.864 1.00 23.94 N
ATOM 23 C4 A B 34 5.171 -2.002 10.654 1.00 23.81 C
ATOM 24 P A B 35 7.578 4.220 9.636 1.00 38.44 P
ATOM 25 OP1 A B 35 8.578 5.315 9.641 1.00 32.04 O
ATOM 26 OP2 A B 35 6.238 4.440 10.244 1.00 21.00 O
ATOM 27 O5' A B 35 7.359 3.750 8.133 1.00 44.64 O
TER
ATOM 2 P G A 4 3.878 -12.469 5.704 1.00 66.88 P
ATOM 3 OP1 G A 4 2.452 -12.820 5.440 1.00 64.70 O
ATOM 4 OP2 G A 4 4.889 -12.575 4.612 1.00 48.03 O
ATOM 5 O5' G A 4 3.943 -10.971 6.248 1.00 63.61 O
ATOM 6 C5' G A 4 3.012 -10.512 7.237 1.00 53.95 C
ATOM 7 C4' G A 4 3.371 -9.125 7.706 1.00 46.33 C
ATOM 8 O4' G A 4 4.737 -9.107 8.201 1.00 45.69 O
ATOM 9 C3' G A 4 3.363 -8.001 6.687 1.00 40.52 C
ATOM 10 O3' G A 4 2.066 -7.500 6.421 1.00 47.06 O
ATOM 11 C2' G A 4 4.212 -6.943 7.377 1.00 42.04 C
ATOM 12 O2' G A 4 3.475 -6.224 8.348 1.00 43.70 O
ATOM 13 C1' G A 4 5.264 -7.798 8.076 1.00 31.41 C
ATOM 14 N9 G A 4 6.501 -7.839 7.307 1.00 24.39 N
ATOM 15 C8 G A 4 7.026 -8.888 6.592 1.00 29.37 C
ATOM 16 N7 G A 4 8.158 -8.591 6.005 1.00 32.88 N
ATOM 17 C5 G A 4 8.388 -7.266 6.352 1.00 23.47 C
ATOM 18 C6 G A 4 9.458 -6.393 6.013 1.00 28.67 C
ATOM 19 O6 G A 4 10.450 -6.622 5.314 1.00 27.35 O
ATOM 20 N1 G A 4 9.292 -5.136 6.584 1.00 24.95 N
ATOM 21 C2 G A 4 8.235 -4.763 7.377 1.00 26.92 C
ATOM 22 N2 G A 4 8.255 -3.513 7.838 1.00 28.71 N
ATOM 23 N3 G A 4 7.234 -5.561 7.696 1.00 22.90 N
ATOM 24 C4 G A 4 7.375 -6.789 7.155 1.00 29.13 C
ATOM 25 P G A 5 1.758 -6.834 4.989 1.00 49.25 P
ATOM 26 OP1 G A 5 0.428 -6.158 5.065 1.00 37.09 O
ATOM 27 OP2 G A 5 1.991 -7.883 3.963 1.00 42.81 O
ATOM 28 O5' G A 5 2.899 -5.734 4.819 1.00 32.92 O
TER
ATOM 1 O3' A B 33 6.308 1.611 15.926 1.00 35.76 O
ATOM 2 P A B 34 5.839 2.793 14.965 1.00 32.91 P
ATOM 3 OP1 A B 34 6.554 4.030 15.366 1.00 36.15 O
ATOM 4 OP2 A B 34 4.351 2.768 14.939 1.00 23.95 O
ATOM 5 O5' A B 34 6.414 2.342 13.557 1.00 34.02 O
ATOM 6 C5' A B 34 7.826 2.172 13.384 1.00 35.68 C
ATOM 7 C4' A B 34 8.100 1.383 12.136 1.00 40.49 C
ATOM 8 O4' A B 34 7.592 0.035 12.283 1.00 46.64 O
ATOM 9 C3' A B 34 7.426 1.921 10.889 1.00 37.28 C
ATOM 10 O3' A B 34 8.249 2.933 10.322 1.00 38.08 O
ATOM 11 C2' A B 34 7.311 0.685 10.002 1.00 36.45 C
ATOM 12 O2' A B 34 8.496 0.425 9.278 1.00 44.66 O
ATOM 13 C1' A B 34 7.122 -0.432 11.032 1.00 36.77 C
ATOM 14 N9 A B 34 5.743 -0.875 11.198 1.00 24.80 N
ATOM 15 C8 A B 34 4.754 -0.265 11.923 1.00 28.92 C
ATOM 16 N7 A B 34 3.606 -0.896 11.888 1.00 28.93 N
ATOM 17 C5 A B 34 3.857 -2.000 11.087 1.00 22.34 C
ATOM 18 C6 A B 34 3.040 -3.060 10.664 1.00 26.52 C
ATOM 19 N6 A B 34 1.749 -3.175 11.000 1.00 26.24 N
ATOM 20 N1 A B 34 3.596 -4.006 9.874 1.00 25.01 N
ATOM 21 C2 A B 34 4.889 -3.875 9.532 1.00 27.90 C
ATOM 22 N3 A B 34 5.758 -2.920 9.864 1.00 23.94 N
ATOM 23 C4 A B 34 5.171 -2.002 10.654 1.00 23.81 C
ATOM 24 P A B 35 7.578 4.220 9.636 1.00 38.44 P
ATOM 25 OP1 A B 35 8.578 5.315 9.641 1.00 32.04 O
ATOM 26 OP2 A B 35 6.238 4.440 10.244 1.00 21.00 O
ATOM 27 O5' A B 35 7.359 3.750 8.133 1.00 44.64 O
TER
Atoms:
OP1: (2.452,-12.820,5.440)
OP2: (4.889,-12.575,4.612)
C3': (3.363,-8.001,6.687)
C1': (5.264,-7.798,8.076)
C5': (3.012,-10.512,7.237)
O6: (10.450,-6.622,5.314)
O4': (4.737,-9.107,8.201)
C8: (7.026,-8.888,6.592)
C2: (8.235,-4.763,7.377)
C6: (9.458,-6.393,6.013)
C5: (8.388,-7.266,6.352)
C4: (7.375,-6.789,7.155)
P: (3.878,-12.469,5.704)
C4': (3.371,-9.125,7.706)
C2': (4.212,-6.943,7.377)
O2': (3.475,-6.224,8.348)
N1: (9.292,-5.136,6.584)
N2: (8.255,-3.513,7.838)
N3: (7.234,-5.561,7.696)
N7: (8.158,-8.591,6.005)
N9: (6.501,-7.839,7.307)
O5': (3.943,-10.971,6.248)
O3': (2.066,-7.500,6.421)
OP2: (4.889,-12.575,4.612)
C3': (3.363,-8.001,6.687)
C1': (5.264,-7.798,8.076)
C5': (3.012,-10.512,7.237)
O6: (10.450,-6.622,5.314)
O4': (4.737,-9.107,8.201)
C8: (7.026,-8.888,6.592)
C2: (8.235,-4.763,7.377)
C6: (9.458,-6.393,6.013)
C5: (8.388,-7.266,6.352)
C4: (7.375,-6.789,7.155)
P: (3.878,-12.469,5.704)
C4': (3.371,-9.125,7.706)
C2': (4.212,-6.943,7.377)
O2': (3.475,-6.224,8.348)
N1: (9.292,-5.136,6.584)
N2: (8.255,-3.513,7.838)
N3: (7.234,-5.561,7.696)
N7: (8.158,-8.591,6.005)
N9: (6.501,-7.839,7.307)
O5': (3.943,-10.971,6.248)
O3': (2.066,-7.500,6.421)
OP1: (6.554,4.030,15.366)
OP2: (4.351,2.768,14.939)
C3': (7.426,1.921,10.889)
C1': (7.122,-0.432,11.032)
C5': (7.826,2.172,13.384)
O4': (7.592,0.035,12.283)
C8: (4.754,-0.265,11.923)
O2': (8.496,0.425,9.278)
C6: (3.040,-3.060,10.664)
C5: (3.857,-2.000,11.087)
C4: (5.171,-2.002,10.654)
P: (5.839,2.793,14.965)
C4': (8.100,1.383,12.136)
C2': (7.311,0.685,10.002)
C2: (4.889,-3.875,9.532)
N1: (3.596,-4.006,9.874)
N3: (5.758,-2.920,9.864)
N6: (1.749,-3.175,11.000)
N7: (3.606,-0.896,11.888)
N9: (5.743,-0.875,11.198)
O5': (6.414,2.342,13.557)
O3': (8.249,2.933,10.322)
OP2: (4.351,2.768,14.939)
C3': (7.426,1.921,10.889)
C1': (7.122,-0.432,11.032)
C5': (7.826,2.172,13.384)
O4': (7.592,0.035,12.283)
C8: (4.754,-0.265,11.923)
O2': (8.496,0.425,9.278)
C6: (3.040,-3.060,10.664)
C5: (3.857,-2.000,11.087)
C4: (5.171,-2.002,10.654)
P: (5.839,2.793,14.965)
C4': (8.100,1.383,12.136)
C2': (7.311,0.685,10.002)
C2: (4.889,-3.875,9.532)
N1: (3.596,-4.006,9.874)
N3: (5.758,-2.920,9.864)
N6: (1.749,-3.175,11.000)
N7: (3.606,-0.896,11.888)
N9: (5.743,-0.875,11.198)
O5': (6.414,2.342,13.557)
O3': (8.249,2.933,10.322)
Image (generated by PyMOL):