ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0986:0926

Extra

PDB:
ATOM 1 O3' U A 985 22.521 76.320 82.795 1.00 46.84 O
ATOM 2 P G A 986 21.394 76.363 81.648 1.00 48.43 P
ATOM 3 OP1 G A 986 21.318 77.785 81.221 1.00 45.84 O
ATOM 4 OP2 G A 986 20.169 75.669 82.124 1.00 46.47 O
ATOM 5 O5' G A 986 22.013 75.505 80.457 1.00 46.96 O
ATOM 6 C5' G A 986 23.116 76.010 79.691 1.00 48.15 C
ATOM 7 C4' G A 986 23.531 75.013 78.640 1.00 49.69 C
ATOM 8 O4' G A 986 24.121 73.844 79.271 1.00 49.70 O
ATOM 9 C3' G A 986 22.421 74.432 77.782 1.00 51.40 C
ATOM 10 O3' G A 986 21.971 75.332 76.765 1.00 55.32 O
ATOM 11 C2' G A 986 23.092 73.176 77.244 1.00 50.07 C
ATOM 12 O2' G A 986 24.039 73.478 76.242 1.00 48.88 O
ATOM 13 C1' G A 986 23.834 72.689 78.492 1.00 49.31 C
ATOM 14 N9 G A 986 23.021 71.781 79.299 1.00 46.77 N
ATOM 15 C8 G A 986 22.223 72.118 80.362 1.00 47.39 C
ATOM 16 N7 G A 986 21.585 71.100 80.872 1.00 45.95 N
ATOM 17 C5 G A 986 21.991 70.023 80.104 1.00 45.51 C
ATOM 18 C6 G A 986 21.626 68.663 80.182 1.00 46.09 C
ATOM 19 O6 G A 986 20.834 68.124 80.963 1.00 47.39 O
ATOM 20 N1 G A 986 22.282 67.902 79.219 1.00 45.33 N
ATOM 21 C2 G A 986 23.169 68.392 78.294 1.00 44.76 C
ATOM 22 N2 G A 986 23.714 67.488 77.455 1.00 43.01 N
ATOM 23 N3 G A 986 23.504 69.670 78.202 1.00 44.77 N
ATOM 24 C4 G A 986 22.886 70.423 79.133 1.00 45.34 C
ATOM 25 P U A 987 20.436 75.267 76.263 1.00 57.40 P
ATOM 26 OP1 U A 987 20.128 76.489 75.485 1.00 56.48 O
ATOM 27 OP2 U A 987 19.579 74.918 77.426 1.00 57.96 O
ATOM 28 O5' U A 987 20.443 74.033 75.256 1.00 56.95 O
TER

ATOM 1 O3' G B 925 26.595 66.119 69.245 1.00 57.68 O
ATOM 2 P A B 926 25.778 64.739 69.418 1.00 56.47 P
ATOM 3 OP1 A B 926 26.555 63.642 68.801 1.00 57.15 O
ATOM 4 OP2 A B 926 24.379 64.995 68.975 1.00 56.74 O
ATOM 5 O5' A B 926 25.742 64.495 70.990 1.00 58.73 O
ATOM 6 C5' A B 926 26.914 64.062 71.722 1.00 58.06 C
ATOM 7 C4' A B 926 26.776 64.447 73.181 1.00 58.62 C
ATOM 8 O4' A B 926 26.903 65.893 73.312 1.00 58.59 O
ATOM 9 C3' A B 926 25.435 64.086 73.824 1.00 58.88 C
ATOM 10 O3' A B 926 25.611 63.825 75.212 1.00 59.45 O
ATOM 11 C2' A B 926 24.647 65.383 73.674 1.00 58.76 C
ATOM 12 O2' A B 926 23.585 65.520 74.603 1.00 60.49 O
ATOM 13 C1' A B 926 25.746 66.409 73.935 1.00 57.35 C
ATOM 14 N9 A B 926 25.482 67.743 73.408 1.00 56.21 N
ATOM 15 C8 A B 926 25.339 68.141 72.103 1.00 55.77 C
ATOM 16 N7 A B 926 25.081 69.422 71.969 1.00 55.33 N
ATOM 17 C5 A B 926 25.060 69.896 73.271 1.00 54.50 C
ATOM 18 C6 A B 926 24.834 71.168 73.805 1.00 54.62 C
ATOM 19 N6 A B 926 24.566 72.242 73.060 1.00 56.56 N
ATOM 20 N1 A B 926 24.889 71.306 75.146 1.00 53.85 N
ATOM 21 C2 A B 926 25.151 70.233 75.888 1.00 53.13 C
ATOM 22 N3 A B 926 25.375 68.981 75.505 1.00 54.27 N
ATOM 23 C4 A B 926 25.313 68.878 74.167 1.00 55.34 C
ATOM 24 P G B 927 26.215 62.419 75.690 1.00 61.15 P
ATOM 25 OP1 G B 927 25.963 61.397 74.638 1.00 61.41 O
ATOM 26 OP2 G B 927 25.722 62.190 77.073 1.00 60.89 O
ATOM 27 O5' G B 927 27.787 62.677 75.733 1.00 60.62 O
TER

Atoms:
OP1: (21.318,77.785,81.221)
OP2: (20.169,75.669,82.124)
C3': (22.421,74.432,77.782)
C1': (23.834,72.689,78.492)
C5': (23.116,76.010,79.691)
O6: (20.834,68.124,80.963)
O4': (24.121,73.844,79.271)
C8: (22.223,72.118,80.362)
C2: (23.169,68.392,78.294)
C6: (21.626,68.663,80.182)
C5: (21.991,70.023,80.104)
C4: (22.886,70.423,79.133)
P: (21.394,76.363,81.648)
C4': (23.531,75.013,78.640)
C2': (23.092,73.176,77.244)
O2': (24.039,73.478,76.242)
N1: (22.282,67.902,79.219)
N2: (23.714,67.488,77.455)
N3: (23.504,69.670,78.202)
N7: (21.585,71.100,80.872)
N9: (23.021,71.781,79.299)
O5': (22.013,75.505,80.457)
O3': (21.971,75.332,76.765)
OP1: (26.555,63.642,68.801)
OP2: (24.379,64.995,68.975)
C3': (25.435,64.086,73.824)
C1': (25.746,66.409,73.935)
C5': (26.914,64.062,71.722)
O4': (26.903,65.893,73.312)
C8: (25.339,68.141,72.103)
O2': (23.585,65.520,74.603)
C6: (24.834,71.168,73.805)
C5: (25.060,69.896,73.271)
C4: (25.313,68.878,74.167)
P: (25.778,64.739,69.418)
C4': (26.776,64.447,73.181)
C2': (24.647,65.383,73.674)
C2: (25.151,70.233,75.888)
N1: (24.889,71.306,75.146)
N3: (25.375,68.981,75.505)
N6: (24.566,72.242,73.060)
N7: (25.081,69.422,71.969)
N9: (25.482,67.743,73.408)
O5': (25.742,64.495,70.990)
O3': (25.611,63.825,75.212)
Image (generated by PyMOL):
PyMOL image
show in jmol