Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01924:01954
Extra
PDB:
ATOM 1 O3' U A1923 100.392 121.230 111.611 1.00 42.30 O
ATOM 2 P A A1924 99.994 122.676 111.047 1.00 44.01 P
ATOM 3 OP1 A A1924 100.369 123.683 112.073 1.00 45.35 O
ATOM 4 OP2 A A1924 98.589 122.610 110.567 1.00 45.39 O
ATOM 5 O5' A A1924 100.941 122.855 109.782 1.00 42.68 O
ATOM 6 C5' A A1924 101.962 123.852 109.764 1.00 42.72 C
ATOM 7 C4' A A1924 102.519 124.003 108.371 1.00 44.19 C
ATOM 8 O4' A A1924 103.267 122.804 108.027 1.00 43.55 O
ATOM 9 C3' A A1924 101.504 124.220 107.242 1.00 44.76 C
ATOM 10 O3' A A1924 102.011 125.158 106.297 1.00 43.25 O
ATOM 11 C2' A A1924 101.443 122.850 106.579 1.00 44.81 C
ATOM 12 O2' A A1924 101.107 122.899 105.205 1.00 46.31 O
ATOM 13 C1' A A1924 102.886 122.393 106.740 1.00 44.45 C
ATOM 14 N9 A A1924 103.078 120.954 106.613 1.00 45.55 N
ATOM 15 C8 A A1924 102.167 119.940 106.785 1.00 45.31 C
ATOM 16 N7 A A1924 102.634 118.758 106.474 1.00 46.52 N
ATOM 17 C5 A A1924 103.946 119.007 106.095 1.00 45.40 C
ATOM 18 C6 A A1924 104.965 118.173 105.626 1.00 44.15 C
ATOM 19 N6 A A1924 104.814 116.867 105.425 1.00 44.42 N
ATOM 20 N1 A A1924 106.160 118.735 105.354 1.00 45.95 N
ATOM 21 C2 A A1924 106.306 120.054 105.531 1.00 45.92 C
ATOM 22 N3 A A1924 105.417 120.946 105.947 1.00 45.59 N
ATOM 23 C4 A A1924 104.242 120.350 106.213 1.00 45.75 C
ATOM 24 P G A1925 101.281 126.575 106.114 1.00 42.43 P
ATOM 25 OP1 G A1925 102.218 127.495 105.424 1.00 42.26 O
ATOM 26 OP2 G A1925 100.722 126.949 107.443 1.00 41.46 O
ATOM 27 O5' G A1925 100.075 126.278 105.119 1.00 42.83 O
TER
ATOM 1 O3' A B1953 103.177 111.768 102.883 1.00 54.37 O
ATOM 2 P U B1954 104.581 112.425 103.274 1.00 53.94 P
ATOM 3 OP1 U B1954 105.662 111.671 102.576 1.00 53.04 O
ATOM 4 OP2 U B1954 104.639 112.606 104.741 1.00 53.67 O
ATOM 5 O5' U B1954 104.439 113.875 102.653 1.00 52.20 O
ATOM 6 C5' U B1954 105.180 114.250 101.512 1.00 49.40 C
ATOM 7 C4' U B1954 105.686 115.646 101.687 1.00 48.08 C
ATOM 8 O4' U B1954 106.252 115.800 103.009 1.00 47.26 O
ATOM 9 C3' U B1954 106.811 115.973 100.744 1.00 47.79 C
ATOM 10 O3' U B1954 106.277 116.367 99.506 1.00 47.47 O
ATOM 11 C2' U B1954 107.549 117.067 101.485 1.00 48.55 C
ATOM 12 O2' U B1954 106.889 118.311 101.378 1.00 50.77 O
ATOM 13 C1' U B1954 107.440 116.562 102.929 1.00 49.10 C
ATOM 14 N1 U B1954 108.557 115.708 103.370 1.00 49.73 N
ATOM 15 C2 U B1954 109.843 116.229 103.327 1.00 49.58 C
ATOM 16 O2 U B1954 110.094 117.360 102.943 1.00 51.24 O
ATOM 17 N3 U B1954 110.828 115.377 103.755 1.00 49.23 N
ATOM 18 C4 U B1954 110.672 114.090 104.216 1.00 49.49 C
ATOM 19 O4 U B1954 111.669 113.439 104.533 1.00 49.24 O
ATOM 20 C5 U B1954 109.320 113.622 104.237 1.00 50.07 C
ATOM 21 C6 U B1954 108.335 114.423 103.822 1.00 49.81 C
ATOM 22 P G B1955 106.825 115.685 98.178 1.00 49.72 P
ATOM 23 OP1 G B1955 106.096 116.284 97.031 1.00 50.84 O
ATOM 24 OP2 G B1955 106.843 114.203 98.357 1.00 48.05 O
ATOM 25 O5' G B1955 108.321 116.209 98.134 1.00 50.68 O
TER
ATOM 2 P A A1924 99.994 122.676 111.047 1.00 44.01 P
ATOM 3 OP1 A A1924 100.369 123.683 112.073 1.00 45.35 O
ATOM 4 OP2 A A1924 98.589 122.610 110.567 1.00 45.39 O
ATOM 5 O5' A A1924 100.941 122.855 109.782 1.00 42.68 O
ATOM 6 C5' A A1924 101.962 123.852 109.764 1.00 42.72 C
ATOM 7 C4' A A1924 102.519 124.003 108.371 1.00 44.19 C
ATOM 8 O4' A A1924 103.267 122.804 108.027 1.00 43.55 O
ATOM 9 C3' A A1924 101.504 124.220 107.242 1.00 44.76 C
ATOM 10 O3' A A1924 102.011 125.158 106.297 1.00 43.25 O
ATOM 11 C2' A A1924 101.443 122.850 106.579 1.00 44.81 C
ATOM 12 O2' A A1924 101.107 122.899 105.205 1.00 46.31 O
ATOM 13 C1' A A1924 102.886 122.393 106.740 1.00 44.45 C
ATOM 14 N9 A A1924 103.078 120.954 106.613 1.00 45.55 N
ATOM 15 C8 A A1924 102.167 119.940 106.785 1.00 45.31 C
ATOM 16 N7 A A1924 102.634 118.758 106.474 1.00 46.52 N
ATOM 17 C5 A A1924 103.946 119.007 106.095 1.00 45.40 C
ATOM 18 C6 A A1924 104.965 118.173 105.626 1.00 44.15 C
ATOM 19 N6 A A1924 104.814 116.867 105.425 1.00 44.42 N
ATOM 20 N1 A A1924 106.160 118.735 105.354 1.00 45.95 N
ATOM 21 C2 A A1924 106.306 120.054 105.531 1.00 45.92 C
ATOM 22 N3 A A1924 105.417 120.946 105.947 1.00 45.59 N
ATOM 23 C4 A A1924 104.242 120.350 106.213 1.00 45.75 C
ATOM 24 P G A1925 101.281 126.575 106.114 1.00 42.43 P
ATOM 25 OP1 G A1925 102.218 127.495 105.424 1.00 42.26 O
ATOM 26 OP2 G A1925 100.722 126.949 107.443 1.00 41.46 O
ATOM 27 O5' G A1925 100.075 126.278 105.119 1.00 42.83 O
TER
ATOM 1 O3' A B1953 103.177 111.768 102.883 1.00 54.37 O
ATOM 2 P U B1954 104.581 112.425 103.274 1.00 53.94 P
ATOM 3 OP1 U B1954 105.662 111.671 102.576 1.00 53.04 O
ATOM 4 OP2 U B1954 104.639 112.606 104.741 1.00 53.67 O
ATOM 5 O5' U B1954 104.439 113.875 102.653 1.00 52.20 O
ATOM 6 C5' U B1954 105.180 114.250 101.512 1.00 49.40 C
ATOM 7 C4' U B1954 105.686 115.646 101.687 1.00 48.08 C
ATOM 8 O4' U B1954 106.252 115.800 103.009 1.00 47.26 O
ATOM 9 C3' U B1954 106.811 115.973 100.744 1.00 47.79 C
ATOM 10 O3' U B1954 106.277 116.367 99.506 1.00 47.47 O
ATOM 11 C2' U B1954 107.549 117.067 101.485 1.00 48.55 C
ATOM 12 O2' U B1954 106.889 118.311 101.378 1.00 50.77 O
ATOM 13 C1' U B1954 107.440 116.562 102.929 1.00 49.10 C
ATOM 14 N1 U B1954 108.557 115.708 103.370 1.00 49.73 N
ATOM 15 C2 U B1954 109.843 116.229 103.327 1.00 49.58 C
ATOM 16 O2 U B1954 110.094 117.360 102.943 1.00 51.24 O
ATOM 17 N3 U B1954 110.828 115.377 103.755 1.00 49.23 N
ATOM 18 C4 U B1954 110.672 114.090 104.216 1.00 49.49 C
ATOM 19 O4 U B1954 111.669 113.439 104.533 1.00 49.24 O
ATOM 20 C5 U B1954 109.320 113.622 104.237 1.00 50.07 C
ATOM 21 C6 U B1954 108.335 114.423 103.822 1.00 49.81 C
ATOM 22 P G B1955 106.825 115.685 98.178 1.00 49.72 P
ATOM 23 OP1 G B1955 106.096 116.284 97.031 1.00 50.84 O
ATOM 24 OP2 G B1955 106.843 114.203 98.357 1.00 48.05 O
ATOM 25 O5' G B1955 108.321 116.209 98.134 1.00 50.68 O
TER
Atoms:
OP1: (100.369,123.683,112.073)
OP2: (98.589,122.610,110.567)
C3': (101.504,124.220,107.242)
C1': (102.886,122.393,106.740)
C5': (101.962,123.852,109.764)
O4': (103.267,122.804,108.027)
C8: (102.167,119.940,106.785)
O2': (101.107,122.899,105.205)
C6: (104.965,118.173,105.626)
C5: (103.946,119.007,106.095)
C4: (104.242,120.350,106.213)
P: (99.994,122.676,111.047)
C4': (102.519,124.003,108.371)
C2': (101.443,122.850,106.579)
C2: (106.306,120.054,105.531)
N1: (106.160,118.735,105.354)
N3: (105.417,120.946,105.947)
N6: (104.814,116.867,105.425)
N7: (102.634,118.758,106.474)
N9: (103.078,120.954,106.613)
O5': (100.941,122.855,109.782)
O3': (102.011,125.158,106.297)
OP2: (98.589,122.610,110.567)
C3': (101.504,124.220,107.242)
C1': (102.886,122.393,106.740)
C5': (101.962,123.852,109.764)
O4': (103.267,122.804,108.027)
C8: (102.167,119.940,106.785)
O2': (101.107,122.899,105.205)
C6: (104.965,118.173,105.626)
C5: (103.946,119.007,106.095)
C4: (104.242,120.350,106.213)
P: (99.994,122.676,111.047)
C4': (102.519,124.003,108.371)
C2': (101.443,122.850,106.579)
C2: (106.306,120.054,105.531)
N1: (106.160,118.735,105.354)
N3: (105.417,120.946,105.947)
N6: (104.814,116.867,105.425)
N7: (102.634,118.758,106.474)
N9: (103.078,120.954,106.613)
O5': (100.941,122.855,109.782)
O3': (102.011,125.158,106.297)
C4: (110.672,114.090,104.216)
N3: (110.828,115.377,103.755)
OP1: (105.662,111.671,102.576)
OP2: (104.639,112.606,104.741)
C2: (109.843,116.229,103.327)
C1': (107.440,116.562,102.929)
C3': (106.811,115.973,100.744)
O5': (104.439,113.875,102.653)
O4': (106.252,115.800,103.009)
C5': (105.180,114.250,101.512)
P: (104.581,112.425,103.274)
C4': (105.686,115.646,101.687)
C2': (107.549,117.067,101.485)
O2': (106.889,118.311,101.378)
N1: (108.557,115.708,103.370)
O4: (111.669,113.439,104.533)
O2: (110.094,117.360,102.943)
C6: (108.335,114.423,103.822)
C5: (109.320,113.622,104.237)
O3': (106.277,116.367,99.506)
N3: (110.828,115.377,103.755)
OP1: (105.662,111.671,102.576)
OP2: (104.639,112.606,104.741)
C2: (109.843,116.229,103.327)
C1': (107.440,116.562,102.929)
C3': (106.811,115.973,100.744)
O5': (104.439,113.875,102.653)
O4': (106.252,115.800,103.009)
C5': (105.180,114.250,101.512)
P: (104.581,112.425,103.274)
C4': (105.686,115.646,101.687)
C2': (107.549,117.067,101.485)
O2': (106.889,118.311,101.378)
N1: (108.557,115.708,103.370)
O4: (111.669,113.439,104.533)
O2: (110.094,117.360,102.943)
C6: (108.335,114.423,103.822)
C5: (109.320,113.622,104.237)
O3': (106.277,116.367,99.506)
Image (generated by PyMOL):