Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B82:A40
Extra
PDB:
ATOM 1 O3' A A 81 -17.457 -37.864 9.157 1.00 60.42 O
ATOM 2 P G A 82 -18.473 -37.155 8.146 1.00 61.95 P
ATOM 3 OP1 G A 82 -17.922 -37.287 6.776 1.00 62.09 O
ATOM 4 OP2 G A 82 -18.814 -35.810 8.661 1.00 62.50 O
ATOM 5 O5' G A 82 -19.767 -38.072 8.301 1.00 62.16 O
ATOM 6 C5' G A 82 -19.782 -39.367 7.740 1.00 62.44 C
ATOM 7 C4' G A 82 -20.870 -40.192 8.388 1.00 63.50 C
ATOM 8 O4' G A 82 -20.700 -40.180 9.829 1.00 63.63 O
ATOM 9 C3' G A 82 -22.289 -39.680 8.225 1.00 64.46 C
ATOM 10 O3' G A 82 -22.780 -39.942 6.935 1.00 65.98 O
ATOM 11 C2' G A 82 -22.967 -40.524 9.293 1.00 64.55 C
ATOM 12 O2' G A 82 -23.033 -41.901 8.970 1.00 64.73 O
ATOM 13 C1' G A 82 -21.978 -40.313 10.435 1.00 63.86 C
ATOM 14 N9 G A 82 -22.286 -39.140 11.258 1.00 63.79 N
ATOM 15 C8 G A 82 -21.635 -37.928 11.273 1.00 63.69 C
ATOM 16 N7 G A 82 -22.141 -37.068 12.114 1.00 63.86 N
ATOM 17 C5 G A 82 -23.200 -37.749 12.698 1.00 63.93 C
ATOM 18 C6 G A 82 -24.124 -37.329 13.689 1.00 63.96 C
ATOM 19 O6 G A 82 -24.182 -36.232 14.258 1.00 63.97 O
ATOM 20 N1 G A 82 -25.051 -38.325 14.004 1.00 64.00 N
ATOM 21 C2 G A 82 -25.080 -39.575 13.429 1.00 63.90 C
ATOM 22 N2 G A 82 -26.036 -40.408 13.853 1.00 63.98 N
ATOM 23 N3 G A 82 -24.219 -39.983 12.503 1.00 64.09 N
ATOM 24 C4 G A 82 -23.305 -39.025 12.183 1.00 64.06 C
ATOM 25 P A A 83 -23.672 -38.842 6.182 1.00 68.10 P
ATOM 26 OP1 A A 83 -23.828 -39.290 4.775 1.00 68.29 O
ATOM 27 OP2 A A 83 -23.136 -37.487 6.454 1.00 67.57 O
ATOM 28 O5' A A 83 -25.070 -38.979 6.945 1.00 68.82 O
TER
ATOM 1 O3' A B 39 -25.516 -49.078 16.832 1.00 67.44 O
ATOM 2 P A B 40 -26.954 -49.373 16.183 1.00 67.83 P
ATOM 3 OP1 A B 40 -27.763 -50.035 17.232 1.00 67.47 O
ATOM 4 OP2 A B 40 -26.758 -50.033 14.871 1.00 68.50 O
ATOM 5 O5' A B 40 -27.552 -47.919 15.890 1.00 66.95 O
ATOM 6 C5' A B 40 -28.197 -47.166 16.912 1.00 65.81 C
ATOM 7 C4' A B 40 -28.329 -45.716 16.486 1.00 65.14 C
ATOM 8 O4' A B 40 -27.042 -45.252 16.005 1.00 64.61 O
ATOM 9 C3' A B 40 -29.292 -45.455 15.335 1.00 65.60 C
ATOM 10 O3' A B 40 -30.613 -45.253 15.813 1.00 65.95 O
ATOM 11 C2' A B 40 -28.713 -44.192 14.700 1.00 65.10 C
ATOM 12 O2' A B 40 -29.147 -42.985 15.307 1.00 64.02 O
ATOM 13 C1' A B 40 -27.210 -44.403 14.884 1.00 64.47 C
ATOM 14 N9 A B 40 -26.593 -45.009 13.703 1.00 64.25 N
ATOM 15 C8 A B 40 -26.409 -46.341 13.459 1.00 64.67 C
ATOM 16 N7 A B 40 -25.834 -46.595 12.310 1.00 65.26 N
ATOM 17 C5 A B 40 -25.632 -45.346 11.757 1.00 64.70 C
ATOM 18 C6 A B 40 -25.064 -44.933 10.535 1.00 65.32 C
ATOM 19 N6 A B 40 -24.577 -45.791 9.634 1.00 66.36 N
ATOM 20 N1 A B 40 -25.005 -43.605 10.280 1.00 65.00 N
ATOM 21 C2 A B 40 -25.494 -42.750 11.193 1.00 63.93 C
ATOM 22 N3 A B 40 -26.053 -43.025 12.374 1.00 63.23 N
ATOM 23 C4 A B 40 -26.094 -44.353 12.599 1.00 63.90 C
ATOM 24 P G B 41 -31.854 -45.990 15.113 1.00 67.75 P
ATOM 25 OP1 G B 41 -33.065 -45.637 15.889 1.00 67.32 O
ATOM 26 OP2 G B 41 -31.518 -47.422 14.927 1.00 68.21 O
ATOM 27 O5' G B 41 -31.926 -45.301 13.669 1.00 67.99 O
TER
ATOM 2 P G A 82 -18.473 -37.155 8.146 1.00 61.95 P
ATOM 3 OP1 G A 82 -17.922 -37.287 6.776 1.00 62.09 O
ATOM 4 OP2 G A 82 -18.814 -35.810 8.661 1.00 62.50 O
ATOM 5 O5' G A 82 -19.767 -38.072 8.301 1.00 62.16 O
ATOM 6 C5' G A 82 -19.782 -39.367 7.740 1.00 62.44 C
ATOM 7 C4' G A 82 -20.870 -40.192 8.388 1.00 63.50 C
ATOM 8 O4' G A 82 -20.700 -40.180 9.829 1.00 63.63 O
ATOM 9 C3' G A 82 -22.289 -39.680 8.225 1.00 64.46 C
ATOM 10 O3' G A 82 -22.780 -39.942 6.935 1.00 65.98 O
ATOM 11 C2' G A 82 -22.967 -40.524 9.293 1.00 64.55 C
ATOM 12 O2' G A 82 -23.033 -41.901 8.970 1.00 64.73 O
ATOM 13 C1' G A 82 -21.978 -40.313 10.435 1.00 63.86 C
ATOM 14 N9 G A 82 -22.286 -39.140 11.258 1.00 63.79 N
ATOM 15 C8 G A 82 -21.635 -37.928 11.273 1.00 63.69 C
ATOM 16 N7 G A 82 -22.141 -37.068 12.114 1.00 63.86 N
ATOM 17 C5 G A 82 -23.200 -37.749 12.698 1.00 63.93 C
ATOM 18 C6 G A 82 -24.124 -37.329 13.689 1.00 63.96 C
ATOM 19 O6 G A 82 -24.182 -36.232 14.258 1.00 63.97 O
ATOM 20 N1 G A 82 -25.051 -38.325 14.004 1.00 64.00 N
ATOM 21 C2 G A 82 -25.080 -39.575 13.429 1.00 63.90 C
ATOM 22 N2 G A 82 -26.036 -40.408 13.853 1.00 63.98 N
ATOM 23 N3 G A 82 -24.219 -39.983 12.503 1.00 64.09 N
ATOM 24 C4 G A 82 -23.305 -39.025 12.183 1.00 64.06 C
ATOM 25 P A A 83 -23.672 -38.842 6.182 1.00 68.10 P
ATOM 26 OP1 A A 83 -23.828 -39.290 4.775 1.00 68.29 O
ATOM 27 OP2 A A 83 -23.136 -37.487 6.454 1.00 67.57 O
ATOM 28 O5' A A 83 -25.070 -38.979 6.945 1.00 68.82 O
TER
ATOM 1 O3' A B 39 -25.516 -49.078 16.832 1.00 67.44 O
ATOM 2 P A B 40 -26.954 -49.373 16.183 1.00 67.83 P
ATOM 3 OP1 A B 40 -27.763 -50.035 17.232 1.00 67.47 O
ATOM 4 OP2 A B 40 -26.758 -50.033 14.871 1.00 68.50 O
ATOM 5 O5' A B 40 -27.552 -47.919 15.890 1.00 66.95 O
ATOM 6 C5' A B 40 -28.197 -47.166 16.912 1.00 65.81 C
ATOM 7 C4' A B 40 -28.329 -45.716 16.486 1.00 65.14 C
ATOM 8 O4' A B 40 -27.042 -45.252 16.005 1.00 64.61 O
ATOM 9 C3' A B 40 -29.292 -45.455 15.335 1.00 65.60 C
ATOM 10 O3' A B 40 -30.613 -45.253 15.813 1.00 65.95 O
ATOM 11 C2' A B 40 -28.713 -44.192 14.700 1.00 65.10 C
ATOM 12 O2' A B 40 -29.147 -42.985 15.307 1.00 64.02 O
ATOM 13 C1' A B 40 -27.210 -44.403 14.884 1.00 64.47 C
ATOM 14 N9 A B 40 -26.593 -45.009 13.703 1.00 64.25 N
ATOM 15 C8 A B 40 -26.409 -46.341 13.459 1.00 64.67 C
ATOM 16 N7 A B 40 -25.834 -46.595 12.310 1.00 65.26 N
ATOM 17 C5 A B 40 -25.632 -45.346 11.757 1.00 64.70 C
ATOM 18 C6 A B 40 -25.064 -44.933 10.535 1.00 65.32 C
ATOM 19 N6 A B 40 -24.577 -45.791 9.634 1.00 66.36 N
ATOM 20 N1 A B 40 -25.005 -43.605 10.280 1.00 65.00 N
ATOM 21 C2 A B 40 -25.494 -42.750 11.193 1.00 63.93 C
ATOM 22 N3 A B 40 -26.053 -43.025 12.374 1.00 63.23 N
ATOM 23 C4 A B 40 -26.094 -44.353 12.599 1.00 63.90 C
ATOM 24 P G B 41 -31.854 -45.990 15.113 1.00 67.75 P
ATOM 25 OP1 G B 41 -33.065 -45.637 15.889 1.00 67.32 O
ATOM 26 OP2 G B 41 -31.518 -47.422 14.927 1.00 68.21 O
ATOM 27 O5' G B 41 -31.926 -45.301 13.669 1.00 67.99 O
TER
Atoms:
OP1: (-17.922,-37.287,6.776)
OP2: (-18.814,-35.810,8.661)
C3': (-22.289,-39.680,8.225)
C1': (-21.978,-40.313,10.435)
C5': (-19.782,-39.367,7.740)
O6: (-24.182,-36.232,14.258)
O4': (-20.700,-40.180,9.829)
C8: (-21.635,-37.928,11.273)
C2: (-25.080,-39.575,13.429)
C6: (-24.124,-37.329,13.689)
C5: (-23.200,-37.749,12.698)
C4: (-23.305,-39.025,12.183)
P: (-18.473,-37.155,8.146)
C4': (-20.870,-40.192,8.388)
C2': (-22.967,-40.524,9.293)
O2': (-23.033,-41.901,8.970)
N1: (-25.051,-38.325,14.004)
N2: (-26.036,-40.408,13.853)
N3: (-24.219,-39.983,12.503)
N7: (-22.141,-37.068,12.114)
N9: (-22.286,-39.140,11.258)
O5': (-19.767,-38.072,8.301)
O3': (-22.780,-39.942,6.935)
OP2: (-18.814,-35.810,8.661)
C3': (-22.289,-39.680,8.225)
C1': (-21.978,-40.313,10.435)
C5': (-19.782,-39.367,7.740)
O6: (-24.182,-36.232,14.258)
O4': (-20.700,-40.180,9.829)
C8: (-21.635,-37.928,11.273)
C2: (-25.080,-39.575,13.429)
C6: (-24.124,-37.329,13.689)
C5: (-23.200,-37.749,12.698)
C4: (-23.305,-39.025,12.183)
P: (-18.473,-37.155,8.146)
C4': (-20.870,-40.192,8.388)
C2': (-22.967,-40.524,9.293)
O2': (-23.033,-41.901,8.970)
N1: (-25.051,-38.325,14.004)
N2: (-26.036,-40.408,13.853)
N3: (-24.219,-39.983,12.503)
N7: (-22.141,-37.068,12.114)
N9: (-22.286,-39.140,11.258)
O5': (-19.767,-38.072,8.301)
O3': (-22.780,-39.942,6.935)
OP1: (-27.763,-50.035,17.232)
OP2: (-26.758,-50.033,14.871)
C3': (-29.292,-45.455,15.335)
C1': (-27.210,-44.403,14.884)
C5': (-28.197,-47.166,16.912)
O4': (-27.042,-45.252,16.005)
C8: (-26.409,-46.341,13.459)
O2': (-29.147,-42.985,15.307)
C6: (-25.064,-44.933,10.535)
C5: (-25.632,-45.346,11.757)
C4: (-26.094,-44.353,12.599)
P: (-26.954,-49.373,16.183)
C4': (-28.329,-45.716,16.486)
C2': (-28.713,-44.192,14.700)
C2: (-25.494,-42.750,11.193)
N1: (-25.005,-43.605,10.280)
N3: (-26.053,-43.025,12.374)
N6: (-24.577,-45.791,9.634)
N7: (-25.834,-46.595,12.310)
N9: (-26.593,-45.009,13.703)
O5': (-27.552,-47.919,15.890)
O3': (-30.613,-45.253,15.813)
OP2: (-26.758,-50.033,14.871)
C3': (-29.292,-45.455,15.335)
C1': (-27.210,-44.403,14.884)
C5': (-28.197,-47.166,16.912)
O4': (-27.042,-45.252,16.005)
C8: (-26.409,-46.341,13.459)
O2': (-29.147,-42.985,15.307)
C6: (-25.064,-44.933,10.535)
C5: (-25.632,-45.346,11.757)
C4: (-26.094,-44.353,12.599)
P: (-26.954,-49.373,16.183)
C4': (-28.329,-45.716,16.486)
C2': (-28.713,-44.192,14.700)
C2: (-25.494,-42.750,11.193)
N1: (-25.005,-43.605,10.280)
N3: (-26.053,-43.025,12.374)
N6: (-24.577,-45.791,9.634)
N7: (-25.834,-46.595,12.310)
N9: (-26.593,-45.009,13.703)
O5': (-27.552,-47.919,15.890)
O3': (-30.613,-45.253,15.813)
Image (generated by PyMOL):