Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXE:B83:A40
Extra
PDB:
ATOM 1 O3' A A 82 -16.790 -37.610 9.290 1.00 59.93 O
ATOM 2 P G A 83 -17.667 -36.755 8.250 1.00 61.35 P
ATOM 3 OP1 G A 83 -16.997 -36.825 6.935 1.00 61.91 O
ATOM 4 OP2 G A 83 -17.963 -35.422 8.824 1.00 61.57 O
ATOM 5 O5' G A 83 -19.028 -37.595 8.186 1.00 61.79 O
ATOM 6 C5' G A 83 -18.982 -38.978 7.849 1.00 61.93 C
ATOM 7 C4' G A 83 -20.104 -39.764 8.508 1.00 62.62 C
ATOM 8 O4' G A 83 -19.940 -39.795 9.952 1.00 62.02 O
ATOM 9 C3' G A 83 -21.516 -39.224 8.328 1.00 63.37 C
ATOM 10 O3' G A 83 -22.021 -39.505 7.034 1.00 64.38 O
ATOM 11 C2' G A 83 -22.235 -39.997 9.429 1.00 63.12 C
ATOM 12 O2' G A 83 -22.432 -41.366 9.126 1.00 63.38 O
ATOM 13 C1' G A 83 -21.222 -39.842 10.563 1.00 62.01 C
ATOM 14 N9 G A 83 -21.461 -38.628 11.353 1.00 61.37 N
ATOM 15 C8 G A 83 -20.747 -37.449 11.319 1.00 60.96 C
ATOM 16 N7 G A 83 -21.201 -36.535 12.133 1.00 60.79 N
ATOM 17 C5 G A 83 -22.290 -37.144 12.747 1.00 60.74 C
ATOM 18 C6 G A 83 -23.185 -36.645 13.726 1.00 60.49 C
ATOM 19 O6 G A 83 -23.180 -35.527 14.257 1.00 60.70 O
ATOM 20 N1 G A 83 -24.157 -37.580 14.082 1.00 60.31 N
ATOM 21 C2 G A 83 -24.251 -38.846 13.552 1.00 60.48 C
ATOM 22 N2 G A 83 -25.244 -39.622 14.009 1.00 60.53 N
ATOM 23 N3 G A 83 -23.418 -39.326 12.637 1.00 60.75 N
ATOM 24 C4 G A 83 -22.465 -38.428 12.278 1.00 60.88 C
ATOM 25 P A A 84 -22.902 -38.406 6.271 1.00 65.65 P
ATOM 26 OP1 A A 84 -23.074 -38.872 4.881 1.00 66.83 O
ATOM 27 OP2 A A 84 -22.340 -37.060 6.512 1.00 65.22 O
ATOM 28 O5' A A 84 -24.304 -38.504 7.031 1.00 66.61 O
TER
ATOM 1 O3' A B 39 -25.117 -48.357 17.107 1.00 62.00 O
ATOM 2 P A B 40 -26.496 -48.786 16.414 1.00 62.41 P
ATOM 3 OP1 A B 40 -27.288 -49.489 17.450 1.00 61.90 O
ATOM 4 OP2 A B 40 -26.217 -49.454 15.120 1.00 63.46 O
ATOM 5 O5' A B 40 -27.164 -47.370 16.082 1.00 61.72 O
ATOM 6 C5' A B 40 -27.665 -46.547 17.132 1.00 60.31 C
ATOM 7 C4' A B 40 -27.812 -45.113 16.668 1.00 59.70 C
ATOM 8 O4' A B 40 -26.530 -44.645 16.187 1.00 59.41 O
ATOM 9 C3' A B 40 -28.760 -44.901 15.496 1.00 60.32 C
ATOM 10 O3' A B 40 -30.100 -44.765 15.945 1.00 60.47 O
ATOM 11 C2' A B 40 -28.211 -43.618 14.876 1.00 60.16 C
ATOM 12 O2' A B 40 -28.651 -42.431 15.512 1.00 59.12 O
ATOM 13 C1' A B 40 -26.708 -43.809 15.060 1.00 60.04 C
ATOM 14 N9 A B 40 -26.063 -44.418 13.895 1.00 61.07 N
ATOM 15 C8 A B 40 -25.842 -45.751 13.675 1.00 61.59 C
ATOM 16 N7 A B 40 -25.241 -46.009 12.539 1.00 62.55 N
ATOM 17 C5 A B 40 -25.055 -44.762 11.968 1.00 62.55 C
ATOM 18 C6 A B 40 -24.474 -44.350 10.749 1.00 63.34 C
ATOM 19 N6 A B 40 -23.951 -45.209 9.867 1.00 64.37 N
ATOM 20 N1 A B 40 -24.441 -43.023 10.472 1.00 63.05 N
ATOM 21 C2 A B 40 -24.967 -42.166 11.362 1.00 62.42 C
ATOM 22 N3 A B 40 -25.540 -42.439 12.539 1.00 61.82 N
ATOM 23 C4 A B 40 -25.557 -43.766 12.789 1.00 61.79 C
ATOM 24 P G B 41 -31.315 -45.456 15.157 1.00 61.73 P
ATOM 25 OP1 G B 41 -32.564 -45.106 15.871 1.00 61.38 O
ATOM 26 OP2 G B 41 -30.994 -46.883 14.930 1.00 61.98 O
ATOM 27 O5' G B 41 -31.297 -44.702 13.747 1.00 63.43 O
TER
ATOM 2 P G A 83 -17.667 -36.755 8.250 1.00 61.35 P
ATOM 3 OP1 G A 83 -16.997 -36.825 6.935 1.00 61.91 O
ATOM 4 OP2 G A 83 -17.963 -35.422 8.824 1.00 61.57 O
ATOM 5 O5' G A 83 -19.028 -37.595 8.186 1.00 61.79 O
ATOM 6 C5' G A 83 -18.982 -38.978 7.849 1.00 61.93 C
ATOM 7 C4' G A 83 -20.104 -39.764 8.508 1.00 62.62 C
ATOM 8 O4' G A 83 -19.940 -39.795 9.952 1.00 62.02 O
ATOM 9 C3' G A 83 -21.516 -39.224 8.328 1.00 63.37 C
ATOM 10 O3' G A 83 -22.021 -39.505 7.034 1.00 64.38 O
ATOM 11 C2' G A 83 -22.235 -39.997 9.429 1.00 63.12 C
ATOM 12 O2' G A 83 -22.432 -41.366 9.126 1.00 63.38 O
ATOM 13 C1' G A 83 -21.222 -39.842 10.563 1.00 62.01 C
ATOM 14 N9 G A 83 -21.461 -38.628 11.353 1.00 61.37 N
ATOM 15 C8 G A 83 -20.747 -37.449 11.319 1.00 60.96 C
ATOM 16 N7 G A 83 -21.201 -36.535 12.133 1.00 60.79 N
ATOM 17 C5 G A 83 -22.290 -37.144 12.747 1.00 60.74 C
ATOM 18 C6 G A 83 -23.185 -36.645 13.726 1.00 60.49 C
ATOM 19 O6 G A 83 -23.180 -35.527 14.257 1.00 60.70 O
ATOM 20 N1 G A 83 -24.157 -37.580 14.082 1.00 60.31 N
ATOM 21 C2 G A 83 -24.251 -38.846 13.552 1.00 60.48 C
ATOM 22 N2 G A 83 -25.244 -39.622 14.009 1.00 60.53 N
ATOM 23 N3 G A 83 -23.418 -39.326 12.637 1.00 60.75 N
ATOM 24 C4 G A 83 -22.465 -38.428 12.278 1.00 60.88 C
ATOM 25 P A A 84 -22.902 -38.406 6.271 1.00 65.65 P
ATOM 26 OP1 A A 84 -23.074 -38.872 4.881 1.00 66.83 O
ATOM 27 OP2 A A 84 -22.340 -37.060 6.512 1.00 65.22 O
ATOM 28 O5' A A 84 -24.304 -38.504 7.031 1.00 66.61 O
TER
ATOM 1 O3' A B 39 -25.117 -48.357 17.107 1.00 62.00 O
ATOM 2 P A B 40 -26.496 -48.786 16.414 1.00 62.41 P
ATOM 3 OP1 A B 40 -27.288 -49.489 17.450 1.00 61.90 O
ATOM 4 OP2 A B 40 -26.217 -49.454 15.120 1.00 63.46 O
ATOM 5 O5' A B 40 -27.164 -47.370 16.082 1.00 61.72 O
ATOM 6 C5' A B 40 -27.665 -46.547 17.132 1.00 60.31 C
ATOM 7 C4' A B 40 -27.812 -45.113 16.668 1.00 59.70 C
ATOM 8 O4' A B 40 -26.530 -44.645 16.187 1.00 59.41 O
ATOM 9 C3' A B 40 -28.760 -44.901 15.496 1.00 60.32 C
ATOM 10 O3' A B 40 -30.100 -44.765 15.945 1.00 60.47 O
ATOM 11 C2' A B 40 -28.211 -43.618 14.876 1.00 60.16 C
ATOM 12 O2' A B 40 -28.651 -42.431 15.512 1.00 59.12 O
ATOM 13 C1' A B 40 -26.708 -43.809 15.060 1.00 60.04 C
ATOM 14 N9 A B 40 -26.063 -44.418 13.895 1.00 61.07 N
ATOM 15 C8 A B 40 -25.842 -45.751 13.675 1.00 61.59 C
ATOM 16 N7 A B 40 -25.241 -46.009 12.539 1.00 62.55 N
ATOM 17 C5 A B 40 -25.055 -44.762 11.968 1.00 62.55 C
ATOM 18 C6 A B 40 -24.474 -44.350 10.749 1.00 63.34 C
ATOM 19 N6 A B 40 -23.951 -45.209 9.867 1.00 64.37 N
ATOM 20 N1 A B 40 -24.441 -43.023 10.472 1.00 63.05 N
ATOM 21 C2 A B 40 -24.967 -42.166 11.362 1.00 62.42 C
ATOM 22 N3 A B 40 -25.540 -42.439 12.539 1.00 61.82 N
ATOM 23 C4 A B 40 -25.557 -43.766 12.789 1.00 61.79 C
ATOM 24 P G B 41 -31.315 -45.456 15.157 1.00 61.73 P
ATOM 25 OP1 G B 41 -32.564 -45.106 15.871 1.00 61.38 O
ATOM 26 OP2 G B 41 -30.994 -46.883 14.930 1.00 61.98 O
ATOM 27 O5' G B 41 -31.297 -44.702 13.747 1.00 63.43 O
TER
Atoms:
OP1: (-16.997,-36.825,6.935)
OP2: (-17.963,-35.422,8.824)
C3': (-21.516,-39.224,8.328)
C1': (-21.222,-39.842,10.563)
C5': (-18.982,-38.978,7.849)
O6: (-23.180,-35.527,14.257)
O4': (-19.940,-39.795,9.952)
C8: (-20.747,-37.449,11.319)
C2: (-24.251,-38.846,13.552)
C6: (-23.185,-36.645,13.726)
C5: (-22.290,-37.144,12.747)
C4: (-22.465,-38.428,12.278)
P: (-17.667,-36.755,8.250)
C4': (-20.104,-39.764,8.508)
C2': (-22.235,-39.997,9.429)
O2': (-22.432,-41.366,9.126)
N1: (-24.157,-37.580,14.082)
N2: (-25.244,-39.622,14.009)
N3: (-23.418,-39.326,12.637)
N7: (-21.201,-36.535,12.133)
N9: (-21.461,-38.628,11.353)
O5': (-19.028,-37.595,8.186)
O3': (-22.021,-39.505,7.034)
OP2: (-17.963,-35.422,8.824)
C3': (-21.516,-39.224,8.328)
C1': (-21.222,-39.842,10.563)
C5': (-18.982,-38.978,7.849)
O6: (-23.180,-35.527,14.257)
O4': (-19.940,-39.795,9.952)
C8: (-20.747,-37.449,11.319)
C2: (-24.251,-38.846,13.552)
C6: (-23.185,-36.645,13.726)
C5: (-22.290,-37.144,12.747)
C4: (-22.465,-38.428,12.278)
P: (-17.667,-36.755,8.250)
C4': (-20.104,-39.764,8.508)
C2': (-22.235,-39.997,9.429)
O2': (-22.432,-41.366,9.126)
N1: (-24.157,-37.580,14.082)
N2: (-25.244,-39.622,14.009)
N3: (-23.418,-39.326,12.637)
N7: (-21.201,-36.535,12.133)
N9: (-21.461,-38.628,11.353)
O5': (-19.028,-37.595,8.186)
O3': (-22.021,-39.505,7.034)
OP1: (-27.288,-49.489,17.450)
OP2: (-26.217,-49.454,15.120)
C3': (-28.760,-44.901,15.496)
C1': (-26.708,-43.809,15.060)
C5': (-27.665,-46.547,17.132)
O4': (-26.530,-44.645,16.187)
C8: (-25.842,-45.751,13.675)
O2': (-28.651,-42.431,15.512)
C6: (-24.474,-44.350,10.749)
C5: (-25.055,-44.762,11.968)
C4: (-25.557,-43.766,12.789)
P: (-26.496,-48.786,16.414)
C4': (-27.812,-45.113,16.668)
C2': (-28.211,-43.618,14.876)
C2: (-24.967,-42.166,11.362)
N1: (-24.441,-43.023,10.472)
N3: (-25.540,-42.439,12.539)
N6: (-23.951,-45.209,9.867)
N7: (-25.241,-46.009,12.539)
N9: (-26.063,-44.418,13.895)
O5': (-27.164,-47.370,16.082)
O3': (-30.100,-44.765,15.945)
OP2: (-26.217,-49.454,15.120)
C3': (-28.760,-44.901,15.496)
C1': (-26.708,-43.809,15.060)
C5': (-27.665,-46.547,17.132)
O4': (-26.530,-44.645,16.187)
C8: (-25.842,-45.751,13.675)
O2': (-28.651,-42.431,15.512)
C6: (-24.474,-44.350,10.749)
C5: (-25.055,-44.762,11.968)
C4: (-25.557,-43.766,12.789)
P: (-26.496,-48.786,16.414)
C4': (-27.812,-45.113,16.668)
C2': (-28.211,-43.618,14.876)
C2: (-24.967,-42.166,11.362)
N1: (-24.441,-43.023,10.472)
N3: (-25.540,-42.439,12.539)
N6: (-23.951,-45.209,9.867)
N7: (-25.241,-46.009,12.539)
N9: (-26.063,-44.418,13.895)
O5': (-27.164,-47.370,16.082)
O3': (-30.100,-44.765,15.945)
Image (generated by PyMOL):