Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02417:02395
Extra
PDB:
ATOM 1 O3' C A2416 53.470 116.704 142.778 1.00 39.99 O
ATOM 2 P A A2417 53.501 117.102 141.226 1.00 39.27 P
ATOM 3 OP1 A A2417 52.091 117.103 140.765 1.00 38.53 O
ATOM 4 OP2 A A2417 54.501 116.256 140.535 1.00 37.27 O
ATOM 5 O5' A A2417 54.061 118.592 141.230 1.00 38.61 O
ATOM 6 C5' A A2417 53.291 119.665 141.791 1.00 38.77 C
ATOM 7 C4' A A2417 54.113 120.922 141.816 1.00 39.18 C
ATOM 8 O4' A A2417 55.296 120.675 142.617 1.00 39.67 O
ATOM 9 C3' A A2417 54.683 121.363 140.479 1.00 41.12 C
ATOM 10 O3' A A2417 53.719 122.084 139.710 1.00 43.27 O
ATOM 11 C2' A A2417 55.862 122.225 140.913 1.00 39.57 C
ATOM 12 O2' A A2417 55.453 123.507 141.351 1.00 38.59 O
ATOM 13 C1' A A2417 56.384 121.432 142.114 1.00 37.11 C
ATOM 14 N9 A A2417 57.483 120.516 141.804 1.00 33.94 N
ATOM 15 C8 A A2417 57.411 119.203 141.401 1.00 34.08 C
ATOM 16 N7 A A2417 58.581 118.649 141.187 1.00 30.60 N
ATOM 17 C5 A A2417 59.483 119.664 141.471 1.00 30.93 C
ATOM 18 C6 A A2417 60.882 119.717 141.430 1.00 30.71 C
ATOM 19 N6 A A2417 61.649 118.685 141.073 1.00 32.02 N
ATOM 20 N1 A A2417 61.477 120.879 141.772 1.00 29.75 N
ATOM 21 C2 A A2417 60.711 121.908 142.132 1.00 29.23 C
ATOM 22 N3 A A2417 59.388 121.983 142.209 1.00 31.45 N
ATOM 23 C4 A A2417 58.824 120.815 141.858 1.00 31.83 C
ATOM 24 P A A2418 53.757 122.009 138.101 1.00 43.39 P
ATOM 25 OP1 A A2418 52.547 122.701 137.594 1.00 43.75 O
ATOM 26 OP2 A A2418 54.023 120.605 137.705 1.00 41.72 O
ATOM 27 O5' A A2418 55.013 122.894 137.694 1.00 40.62 O
TER
ATOM 1 O3' A B2394 62.973 114.890 135.480 1.00 39.58 O
ATOM 2 P U B2395 62.965 115.625 136.909 1.00 42.68 P
ATOM 3 OP1 U B2395 64.216 115.202 137.594 1.00 41.95 O
ATOM 4 OP2 U B2395 61.651 115.394 137.569 1.00 42.66 O
ATOM 5 O5' U B2395 63.100 117.172 136.558 1.00 39.06 O
ATOM 6 C5' U B2395 64.227 117.658 135.812 1.00 38.05 C
ATOM 7 C4' U B2395 64.922 118.758 136.578 1.00 37.26 C
ATOM 8 O4' U B2395 64.022 119.888 136.728 1.00 37.15 O
ATOM 9 C3' U B2395 65.371 118.400 137.987 1.00 36.25 C
ATOM 10 O3' U B2395 66.467 119.227 138.297 1.00 38.26 O
ATOM 11 C2' U B2395 64.192 118.853 138.831 1.00 35.79 C
ATOM 12 O2' U B2395 64.562 119.150 140.159 1.00 37.00 O
ATOM 13 C1' U B2395 63.783 120.130 138.099 1.00 34.25 C
ATOM 14 N1 U B2395 62.367 120.501 138.255 1.00 32.00 N
ATOM 15 C2 U B2395 62.075 121.820 138.572 1.00 31.00 C
ATOM 16 O2 U B2395 62.931 122.679 138.718 1.00 29.87 O
ATOM 17 N3 U B2395 60.741 122.098 138.705 1.00 28.92 N
ATOM 18 C4 U B2395 59.695 121.221 138.552 1.00 29.44 C
ATOM 19 O4 U B2395 58.547 121.622 138.712 1.00 29.60 O
ATOM 20 C5 U B2395 60.075 119.885 138.222 1.00 29.82 C
ATOM 21 C6 U B2395 61.363 119.577 138.090 1.00 29.38 C
ATOM 22 P C B2396 67.904 118.584 138.567 1.00 40.83 P
ATOM 23 OP1 C B2396 68.455 118.056 137.294 1.00 42.66 O
ATOM 24 OP2 C B2396 67.773 117.684 139.736 1.00 41.99 O
ATOM 25 O5' C B2396 68.753 119.854 138.990 1.00 38.31 O
TER
ATOM 2 P A A2417 53.501 117.102 141.226 1.00 39.27 P
ATOM 3 OP1 A A2417 52.091 117.103 140.765 1.00 38.53 O
ATOM 4 OP2 A A2417 54.501 116.256 140.535 1.00 37.27 O
ATOM 5 O5' A A2417 54.061 118.592 141.230 1.00 38.61 O
ATOM 6 C5' A A2417 53.291 119.665 141.791 1.00 38.77 C
ATOM 7 C4' A A2417 54.113 120.922 141.816 1.00 39.18 C
ATOM 8 O4' A A2417 55.296 120.675 142.617 1.00 39.67 O
ATOM 9 C3' A A2417 54.683 121.363 140.479 1.00 41.12 C
ATOM 10 O3' A A2417 53.719 122.084 139.710 1.00 43.27 O
ATOM 11 C2' A A2417 55.862 122.225 140.913 1.00 39.57 C
ATOM 12 O2' A A2417 55.453 123.507 141.351 1.00 38.59 O
ATOM 13 C1' A A2417 56.384 121.432 142.114 1.00 37.11 C
ATOM 14 N9 A A2417 57.483 120.516 141.804 1.00 33.94 N
ATOM 15 C8 A A2417 57.411 119.203 141.401 1.00 34.08 C
ATOM 16 N7 A A2417 58.581 118.649 141.187 1.00 30.60 N
ATOM 17 C5 A A2417 59.483 119.664 141.471 1.00 30.93 C
ATOM 18 C6 A A2417 60.882 119.717 141.430 1.00 30.71 C
ATOM 19 N6 A A2417 61.649 118.685 141.073 1.00 32.02 N
ATOM 20 N1 A A2417 61.477 120.879 141.772 1.00 29.75 N
ATOM 21 C2 A A2417 60.711 121.908 142.132 1.00 29.23 C
ATOM 22 N3 A A2417 59.388 121.983 142.209 1.00 31.45 N
ATOM 23 C4 A A2417 58.824 120.815 141.858 1.00 31.83 C
ATOM 24 P A A2418 53.757 122.009 138.101 1.00 43.39 P
ATOM 25 OP1 A A2418 52.547 122.701 137.594 1.00 43.75 O
ATOM 26 OP2 A A2418 54.023 120.605 137.705 1.00 41.72 O
ATOM 27 O5' A A2418 55.013 122.894 137.694 1.00 40.62 O
TER
ATOM 1 O3' A B2394 62.973 114.890 135.480 1.00 39.58 O
ATOM 2 P U B2395 62.965 115.625 136.909 1.00 42.68 P
ATOM 3 OP1 U B2395 64.216 115.202 137.594 1.00 41.95 O
ATOM 4 OP2 U B2395 61.651 115.394 137.569 1.00 42.66 O
ATOM 5 O5' U B2395 63.100 117.172 136.558 1.00 39.06 O
ATOM 6 C5' U B2395 64.227 117.658 135.812 1.00 38.05 C
ATOM 7 C4' U B2395 64.922 118.758 136.578 1.00 37.26 C
ATOM 8 O4' U B2395 64.022 119.888 136.728 1.00 37.15 O
ATOM 9 C3' U B2395 65.371 118.400 137.987 1.00 36.25 C
ATOM 10 O3' U B2395 66.467 119.227 138.297 1.00 38.26 O
ATOM 11 C2' U B2395 64.192 118.853 138.831 1.00 35.79 C
ATOM 12 O2' U B2395 64.562 119.150 140.159 1.00 37.00 O
ATOM 13 C1' U B2395 63.783 120.130 138.099 1.00 34.25 C
ATOM 14 N1 U B2395 62.367 120.501 138.255 1.00 32.00 N
ATOM 15 C2 U B2395 62.075 121.820 138.572 1.00 31.00 C
ATOM 16 O2 U B2395 62.931 122.679 138.718 1.00 29.87 O
ATOM 17 N3 U B2395 60.741 122.098 138.705 1.00 28.92 N
ATOM 18 C4 U B2395 59.695 121.221 138.552 1.00 29.44 C
ATOM 19 O4 U B2395 58.547 121.622 138.712 1.00 29.60 O
ATOM 20 C5 U B2395 60.075 119.885 138.222 1.00 29.82 C
ATOM 21 C6 U B2395 61.363 119.577 138.090 1.00 29.38 C
ATOM 22 P C B2396 67.904 118.584 138.567 1.00 40.83 P
ATOM 23 OP1 C B2396 68.455 118.056 137.294 1.00 42.66 O
ATOM 24 OP2 C B2396 67.773 117.684 139.736 1.00 41.99 O
ATOM 25 O5' C B2396 68.753 119.854 138.990 1.00 38.31 O
TER
Atoms:
OP1: (52.091,117.103,140.765)
OP2: (54.501,116.256,140.535)
C3': (54.683,121.363,140.479)
C1': (56.384,121.432,142.114)
C5': (53.291,119.665,141.791)
O4': (55.296,120.675,142.617)
C8: (57.411,119.203,141.401)
O2': (55.453,123.507,141.351)
C6: (60.882,119.717,141.430)
C5: (59.483,119.664,141.471)
C4: (58.824,120.815,141.858)
P: (53.501,117.102,141.226)
C4': (54.113,120.922,141.816)
C2': (55.862,122.225,140.913)
C2: (60.711,121.908,142.132)
N1: (61.477,120.879,141.772)
N3: (59.388,121.983,142.209)
N6: (61.649,118.685,141.073)
N7: (58.581,118.649,141.187)
N9: (57.483,120.516,141.804)
O5': (54.061,118.592,141.230)
O3': (53.719,122.084,139.710)
OP2: (54.501,116.256,140.535)
C3': (54.683,121.363,140.479)
C1': (56.384,121.432,142.114)
C5': (53.291,119.665,141.791)
O4': (55.296,120.675,142.617)
C8: (57.411,119.203,141.401)
O2': (55.453,123.507,141.351)
C6: (60.882,119.717,141.430)
C5: (59.483,119.664,141.471)
C4: (58.824,120.815,141.858)
P: (53.501,117.102,141.226)
C4': (54.113,120.922,141.816)
C2': (55.862,122.225,140.913)
C2: (60.711,121.908,142.132)
N1: (61.477,120.879,141.772)
N3: (59.388,121.983,142.209)
N6: (61.649,118.685,141.073)
N7: (58.581,118.649,141.187)
N9: (57.483,120.516,141.804)
O5': (54.061,118.592,141.230)
O3': (53.719,122.084,139.710)
C4: (59.695,121.221,138.552)
N3: (60.741,122.098,138.705)
OP1: (64.216,115.202,137.594)
OP2: (61.651,115.394,137.569)
C2: (62.075,121.820,138.572)
C1': (63.783,120.130,138.099)
C3': (65.371,118.400,137.987)
O5': (63.100,117.172,136.558)
O4': (64.022,119.888,136.728)
C5': (64.227,117.658,135.812)
P: (62.965,115.625,136.909)
C4': (64.922,118.758,136.578)
C2': (64.192,118.853,138.831)
O2': (64.562,119.150,140.159)
N1: (62.367,120.501,138.255)
O4: (58.547,121.622,138.712)
O2: (62.931,122.679,138.718)
C6: (61.363,119.577,138.090)
C5: (60.075,119.885,138.222)
O3': (66.467,119.227,138.297)
N3: (60.741,122.098,138.705)
OP1: (64.216,115.202,137.594)
OP2: (61.651,115.394,137.569)
C2: (62.075,121.820,138.572)
C1': (63.783,120.130,138.099)
C3': (65.371,118.400,137.987)
O5': (63.100,117.172,136.558)
O4': (64.022,119.888,136.728)
C5': (64.227,117.658,135.812)
P: (62.965,115.625,136.909)
C4': (64.922,118.758,136.578)
C2': (64.192,118.853,138.831)
O2': (64.562,119.150,140.159)
N1: (62.367,120.501,138.255)
O4: (58.547,121.622,138.712)
O2: (62.931,122.679,138.718)
C6: (61.363,119.577,138.090)
C5: (60.075,119.885,138.222)
O3': (66.467,119.227,138.297)
Image (generated by PyMOL):