ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01323:0509

Extra

PDB:
ATOM 1 O3' G A1322 42.973 141.490 70.783 1.00 43.16 O
ATOM 2 P G A1323 43.039 142.471 72.049 1.00 43.91 P
ATOM 3 OP1 G A1323 43.065 143.864 71.538 1.00 42.37 O
ATOM 4 OP2 G A1323 44.112 141.995 72.956 1.00 45.41 O
ATOM 5 O5' G A1323 41.661 142.221 72.799 1.00 43.49 O
ATOM 6 C5' G A1323 40.431 142.682 72.243 1.00 40.09 C
ATOM 7 C4' G A1323 39.292 142.247 73.113 1.00 39.69 C
ATOM 8 O4' G A1323 39.315 140.801 73.220 1.00 39.49 O
ATOM 9 C3' G A1323 39.365 142.693 74.558 1.00 38.11 C
ATOM 10 O3' G A1323 38.927 144.015 74.720 1.00 39.67 O
ATOM 11 C2' G A1323 38.443 141.693 75.227 1.00 39.78 C
ATOM 12 O2' G A1323 37.077 141.936 74.962 1.00 38.13 O
ATOM 13 C1' G A1323 38.861 140.415 74.508 1.00 40.73 C
ATOM 14 N9 G A1323 39.957 139.747 75.208 1.00 42.95 N
ATOM 15 C8 G A1323 41.301 139.811 74.925 1.00 42.93 C
ATOM 16 N7 G A1323 42.027 139.089 75.733 1.00 43.15 N
ATOM 17 C5 G A1323 41.108 138.520 76.603 1.00 43.74 C
ATOM 18 C6 G A1323 41.298 137.634 77.695 1.00 45.13 C
ATOM 19 O6 G A1323 42.352 137.159 78.134 1.00 45.83 O
ATOM 20 N1 G A1323 40.092 137.306 78.298 1.00 46.02 N
ATOM 21 C2 G A1323 38.865 137.772 77.911 1.00 44.59 C
ATOM 22 N2 G A1323 37.820 137.351 78.625 1.00 44.68 N
ATOM 23 N3 G A1323 38.676 138.590 76.902 1.00 43.90 N
ATOM 24 C4 G A1323 39.830 138.920 76.295 1.00 42.75 C
ATOM 25 P C A1324 39.404 144.860 76.000 1.00 42.32 P
ATOM 26 OP1 C A1324 38.735 146.184 75.878 1.00 42.79 O
ATOM 27 OP2 C A1324 40.880 144.792 76.127 1.00 43.85 O
ATOM 28 O5' C A1324 38.789 144.083 77.246 1.00 41.50 O
TER

ATOM 1 O3' A B 508 28.463 135.109 79.483 1.00 43.56 O
ATOM 2 P A B 509 28.447 136.105 80.745 1.00 44.66 P
ATOM 3 OP1 A B 509 27.886 135.368 81.893 1.00 43.66 O
ATOM 4 OP2 A B 509 27.850 137.403 80.343 1.00 45.02 O
ATOM 5 O5' A B 509 29.985 136.378 81.036 1.00 46.52 O
ATOM 6 C5' A B 509 30.922 135.301 81.201 1.00 43.82 C
ATOM 7 C4' A B 509 32.328 135.837 81.106 1.00 41.81 C
ATOM 8 O4' A B 509 32.542 136.367 79.779 1.00 41.11 O
ATOM 9 C3' A B 509 32.590 137.062 81.960 1.00 40.51 C
ATOM 10 O3' A B 509 32.839 136.710 83.301 1.00 41.75 O
ATOM 11 C2' A B 509 33.831 137.646 81.309 1.00 40.58 C
ATOM 12 O2' A B 509 35.021 137.033 81.739 1.00 43.75 O
ATOM 13 C1' A B 509 33.587 137.317 79.835 1.00 41.37 C
ATOM 14 N9 A B 509 33.206 138.502 79.074 1.00 40.67 N
ATOM 15 C8 A B 509 32.051 139.230 79.159 1.00 40.87 C
ATOM 16 N7 A B 509 32.058 140.315 78.424 1.00 43.10 N
ATOM 17 C5 A B 509 33.293 140.282 77.790 1.00 42.97 C
ATOM 18 C6 A B 509 33.922 141.161 76.887 1.00 42.62 C
ATOM 19 N6 A B 509 33.368 142.294 76.458 1.00 44.24 N
ATOM 20 N1 A B 509 35.155 140.831 76.437 1.00 40.72 N
ATOM 21 C2 A B 509 35.708 139.699 76.872 1.00 39.52 C
ATOM 22 N3 A B 509 35.223 138.797 77.726 1.00 41.50 N
ATOM 23 C4 A B 509 33.997 139.154 78.156 1.00 42.05 C
ATOM 24 P U B 510 32.047 137.457 84.475 1.00 44.57 P
ATOM 25 OP1 U B 510 32.752 137.104 85.726 1.00 44.85 O
ATOM 26 OP2 U B 510 30.595 137.173 84.347 1.00 41.88 O
ATOM 27 O5' U B 510 32.297 138.996 84.172 1.00 40.64 O
TER

Atoms:
OP1: (43.065,143.864,71.538)
OP2: (44.112,141.995,72.956)
C3': (39.365,142.693,74.558)
C1': (38.861,140.415,74.508)
C5': (40.431,142.682,72.243)
O6: (42.352,137.159,78.134)
O4': (39.315,140.801,73.220)
C8: (41.301,139.811,74.925)
C2: (38.865,137.772,77.911)
C6: (41.298,137.634,77.695)
C5: (41.108,138.520,76.603)
C4: (39.830,138.920,76.295)
P: (43.039,142.471,72.049)
C4': (39.292,142.247,73.113)
C2': (38.443,141.693,75.227)
O2': (37.077,141.936,74.962)
N1: (40.092,137.306,78.298)
N2: (37.820,137.351,78.625)
N3: (38.676,138.590,76.902)
N7: (42.027,139.089,75.733)
N9: (39.957,139.747,75.208)
O5': (41.661,142.221,72.799)
O3': (38.927,144.015,74.720)
OP1: (27.886,135.368,81.893)
OP2: (27.850,137.403,80.343)
C3': (32.590,137.062,81.960)
C1': (33.587,137.317,79.835)
C5': (30.922,135.301,81.201)
O4': (32.542,136.367,79.779)
C8: (32.051,139.230,79.159)
O2': (35.021,137.033,81.739)
C6: (33.922,141.161,76.887)
C5: (33.293,140.282,77.790)
C4: (33.997,139.154,78.156)
P: (28.447,136.105,80.745)
C4': (32.328,135.837,81.106)
C2': (33.831,137.646,81.309)
C2: (35.708,139.699,76.872)
N1: (35.155,140.831,76.437)
N3: (35.223,138.797,77.726)
N6: (33.368,142.294,76.458)
N7: (32.058,140.315,78.424)
N9: (33.206,138.502,79.074)
O5': (29.985,136.378,81.036)
O3': (32.839,136.710,83.301)
Image (generated by PyMOL):
PyMOL image
show in jmol