Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02236:0904
Extra
PDB:
ATOM 1 O3' A A2235 51.411 75.950 77.184 1.00 45.69 O
ATOM 2 P A A2236 51.800 74.948 75.992 1.00 47.33 P
ATOM 3 OP1 A A2236 50.526 74.372 75.469 1.00 45.69 O
ATOM 4 OP2 A A2236 52.867 74.039 76.479 1.00 45.57 O
ATOM 5 O5' A A2236 52.406 75.912 74.877 1.00 46.46 O
ATOM 6 C5' A A2236 51.635 76.283 73.717 1.00 45.28 C
ATOM 7 C4' A A2236 52.169 77.560 73.118 1.00 44.69 C
ATOM 8 O4' A A2236 51.849 78.681 73.972 1.00 45.75 O
ATOM 9 C3' A A2236 53.674 77.624 72.944 1.00 43.83 C
ATOM 10 O3' A A2236 54.039 77.012 71.718 1.00 44.59 O
ATOM 11 C2' A A2236 53.935 79.123 72.935 1.00 44.17 C
ATOM 12 O2' A A2236 53.620 79.722 71.692 1.00 43.28 O
ATOM 13 C1' A A2236 52.912 79.610 73.959 1.00 43.40 C
ATOM 14 N9 A A2236 53.399 79.733 75.327 1.00 44.34 N
ATOM 15 C8 A A2236 52.941 79.054 76.425 1.00 45.63 C
ATOM 16 N7 A A2236 53.492 79.431 77.549 1.00 47.01 N
ATOM 17 C5 A A2236 54.385 80.416 77.165 1.00 46.60 C
ATOM 18 C6 A A2236 55.249 81.231 77.895 1.00 46.29 C
ATOM 19 N6 A A2236 55.335 81.212 79.226 1.00 45.08 N
ATOM 20 N1 A A2236 56.026 82.092 77.205 1.00 47.22 N
ATOM 21 C2 A A2236 55.916 82.133 75.872 1.00 45.71 C
ATOM 22 N3 A A2236 55.122 81.435 75.076 1.00 46.08 N
ATOM 23 C4 A A2236 54.367 80.586 75.793 1.00 46.43 C
ATOM 24 P C A2237 55.171 75.881 71.697 1.00 45.64 P
ATOM 25 OP1 C A2237 55.139 75.287 70.339 1.00 42.31 O
ATOM 26 OP2 C A2237 55.017 75.011 72.892 1.00 42.25 O
ATOM 27 O5' C A2237 56.523 76.701 71.849 1.00 45.94 O
TER
ATOM 1 O3' A B 903 57.678 82.442 85.185 1.00 40.05 O
ATOM 2 P U B 904 59.185 82.892 84.859 1.00 41.75 P
ATOM 3 OP1 U B 904 60.062 81.944 85.589 1.00 41.38 O
ATOM 4 OP2 U B 904 59.291 84.347 85.127 1.00 39.08 O
ATOM 5 O5' U B 904 59.346 82.655 83.286 1.00 38.78 O
ATOM 6 C5' U B 904 59.531 81.328 82.747 1.00 36.11 C
ATOM 7 C4' U B 904 59.697 81.370 81.235 1.00 36.08 C
ATOM 8 O4' U B 904 58.470 81.807 80.593 1.00 34.37 O
ATOM 9 C3' U B 904 60.768 82.290 80.667 1.00 34.80 C
ATOM 10 O3' U B 904 62.051 81.688 80.695 1.00 34.43 O
ATOM 11 C2' U B 904 60.290 82.470 79.237 1.00 35.32 C
ATOM 12 O2' U B 904 60.572 81.336 78.440 1.00 35.35 O
ATOM 13 C1' U B 904 58.783 82.582 79.448 1.00 33.20 C
ATOM 14 N1 U B 904 58.376 83.971 79.707 1.00 33.20 N
ATOM 15 C2 U B 904 58.279 84.822 78.630 1.00 34.29 C
ATOM 16 O2 U B 904 58.507 84.469 77.491 1.00 36.14 O
ATOM 17 N3 U B 904 57.909 86.108 78.935 1.00 33.74 N
ATOM 18 C4 U B 904 57.632 86.616 80.182 1.00 34.04 C
ATOM 19 O4 U B 904 57.355 87.803 80.301 1.00 35.60 O
ATOM 20 C5 U B 904 57.743 85.677 81.244 1.00 34.28 C
ATOM 21 C6 U B 904 58.105 84.417 80.979 1.00 34.82 C
ATOM 22 P G B 905 63.354 82.601 80.899 1.00 37.92 P
ATOM 23 OP1 G B 905 64.504 81.668 80.998 1.00 37.14 O
ATOM 24 OP2 G B 905 63.119 83.584 81.985 1.00 36.24 O
ATOM 25 O5' G B 905 63.463 83.417 79.535 1.00 36.41 O
TER
ATOM 2 P A A2236 51.800 74.948 75.992 1.00 47.33 P
ATOM 3 OP1 A A2236 50.526 74.372 75.469 1.00 45.69 O
ATOM 4 OP2 A A2236 52.867 74.039 76.479 1.00 45.57 O
ATOM 5 O5' A A2236 52.406 75.912 74.877 1.00 46.46 O
ATOM 6 C5' A A2236 51.635 76.283 73.717 1.00 45.28 C
ATOM 7 C4' A A2236 52.169 77.560 73.118 1.00 44.69 C
ATOM 8 O4' A A2236 51.849 78.681 73.972 1.00 45.75 O
ATOM 9 C3' A A2236 53.674 77.624 72.944 1.00 43.83 C
ATOM 10 O3' A A2236 54.039 77.012 71.718 1.00 44.59 O
ATOM 11 C2' A A2236 53.935 79.123 72.935 1.00 44.17 C
ATOM 12 O2' A A2236 53.620 79.722 71.692 1.00 43.28 O
ATOM 13 C1' A A2236 52.912 79.610 73.959 1.00 43.40 C
ATOM 14 N9 A A2236 53.399 79.733 75.327 1.00 44.34 N
ATOM 15 C8 A A2236 52.941 79.054 76.425 1.00 45.63 C
ATOM 16 N7 A A2236 53.492 79.431 77.549 1.00 47.01 N
ATOM 17 C5 A A2236 54.385 80.416 77.165 1.00 46.60 C
ATOM 18 C6 A A2236 55.249 81.231 77.895 1.00 46.29 C
ATOM 19 N6 A A2236 55.335 81.212 79.226 1.00 45.08 N
ATOM 20 N1 A A2236 56.026 82.092 77.205 1.00 47.22 N
ATOM 21 C2 A A2236 55.916 82.133 75.872 1.00 45.71 C
ATOM 22 N3 A A2236 55.122 81.435 75.076 1.00 46.08 N
ATOM 23 C4 A A2236 54.367 80.586 75.793 1.00 46.43 C
ATOM 24 P C A2237 55.171 75.881 71.697 1.00 45.64 P
ATOM 25 OP1 C A2237 55.139 75.287 70.339 1.00 42.31 O
ATOM 26 OP2 C A2237 55.017 75.011 72.892 1.00 42.25 O
ATOM 27 O5' C A2237 56.523 76.701 71.849 1.00 45.94 O
TER
ATOM 1 O3' A B 903 57.678 82.442 85.185 1.00 40.05 O
ATOM 2 P U B 904 59.185 82.892 84.859 1.00 41.75 P
ATOM 3 OP1 U B 904 60.062 81.944 85.589 1.00 41.38 O
ATOM 4 OP2 U B 904 59.291 84.347 85.127 1.00 39.08 O
ATOM 5 O5' U B 904 59.346 82.655 83.286 1.00 38.78 O
ATOM 6 C5' U B 904 59.531 81.328 82.747 1.00 36.11 C
ATOM 7 C4' U B 904 59.697 81.370 81.235 1.00 36.08 C
ATOM 8 O4' U B 904 58.470 81.807 80.593 1.00 34.37 O
ATOM 9 C3' U B 904 60.768 82.290 80.667 1.00 34.80 C
ATOM 10 O3' U B 904 62.051 81.688 80.695 1.00 34.43 O
ATOM 11 C2' U B 904 60.290 82.470 79.237 1.00 35.32 C
ATOM 12 O2' U B 904 60.572 81.336 78.440 1.00 35.35 O
ATOM 13 C1' U B 904 58.783 82.582 79.448 1.00 33.20 C
ATOM 14 N1 U B 904 58.376 83.971 79.707 1.00 33.20 N
ATOM 15 C2 U B 904 58.279 84.822 78.630 1.00 34.29 C
ATOM 16 O2 U B 904 58.507 84.469 77.491 1.00 36.14 O
ATOM 17 N3 U B 904 57.909 86.108 78.935 1.00 33.74 N
ATOM 18 C4 U B 904 57.632 86.616 80.182 1.00 34.04 C
ATOM 19 O4 U B 904 57.355 87.803 80.301 1.00 35.60 O
ATOM 20 C5 U B 904 57.743 85.677 81.244 1.00 34.28 C
ATOM 21 C6 U B 904 58.105 84.417 80.979 1.00 34.82 C
ATOM 22 P G B 905 63.354 82.601 80.899 1.00 37.92 P
ATOM 23 OP1 G B 905 64.504 81.668 80.998 1.00 37.14 O
ATOM 24 OP2 G B 905 63.119 83.584 81.985 1.00 36.24 O
ATOM 25 O5' G B 905 63.463 83.417 79.535 1.00 36.41 O
TER
Atoms:
OP1: (50.526,74.372,75.469)
OP2: (52.867,74.039,76.479)
C3': (53.674,77.624,72.944)
C1': (52.912,79.610,73.959)
C5': (51.635,76.283,73.717)
O4': (51.849,78.681,73.972)
C8: (52.941,79.054,76.425)
O2': (53.620,79.722,71.692)
C6: (55.249,81.231,77.895)
C5: (54.385,80.416,77.165)
C4: (54.367,80.586,75.793)
P: (51.800,74.948,75.992)
C4': (52.169,77.560,73.118)
C2': (53.935,79.123,72.935)
C2: (55.916,82.133,75.872)
N1: (56.026,82.092,77.205)
N3: (55.122,81.435,75.076)
N6: (55.335,81.212,79.226)
N7: (53.492,79.431,77.549)
N9: (53.399,79.733,75.327)
O5': (52.406,75.912,74.877)
O3': (54.039,77.012,71.718)
OP2: (52.867,74.039,76.479)
C3': (53.674,77.624,72.944)
C1': (52.912,79.610,73.959)
C5': (51.635,76.283,73.717)
O4': (51.849,78.681,73.972)
C8: (52.941,79.054,76.425)
O2': (53.620,79.722,71.692)
C6: (55.249,81.231,77.895)
C5: (54.385,80.416,77.165)
C4: (54.367,80.586,75.793)
P: (51.800,74.948,75.992)
C4': (52.169,77.560,73.118)
C2': (53.935,79.123,72.935)
C2: (55.916,82.133,75.872)
N1: (56.026,82.092,77.205)
N3: (55.122,81.435,75.076)
N6: (55.335,81.212,79.226)
N7: (53.492,79.431,77.549)
N9: (53.399,79.733,75.327)
O5': (52.406,75.912,74.877)
O3': (54.039,77.012,71.718)
C4: (57.632,86.616,80.182)
N3: (57.909,86.108,78.935)
OP1: (60.062,81.944,85.589)
OP2: (59.291,84.347,85.127)
C2: (58.279,84.822,78.630)
C1': (58.783,82.582,79.448)
C3': (60.768,82.290,80.667)
O5': (59.346,82.655,83.286)
O4': (58.470,81.807,80.593)
C5': (59.531,81.328,82.747)
P: (59.185,82.892,84.859)
C4': (59.697,81.370,81.235)
C2': (60.290,82.470,79.237)
O2': (60.572,81.336,78.440)
N1: (58.376,83.971,79.707)
O4: (57.355,87.803,80.301)
O2: (58.507,84.469,77.491)
C6: (58.105,84.417,80.979)
C5: (57.743,85.677,81.244)
O3': (62.051,81.688,80.695)
N3: (57.909,86.108,78.935)
OP1: (60.062,81.944,85.589)
OP2: (59.291,84.347,85.127)
C2: (58.279,84.822,78.630)
C1': (58.783,82.582,79.448)
C3': (60.768,82.290,80.667)
O5': (59.346,82.655,83.286)
O4': (58.470,81.807,80.593)
C5': (59.531,81.328,82.747)
P: (59.185,82.892,84.859)
C4': (59.697,81.370,81.235)
C2': (60.290,82.470,79.237)
O2': (60.572,81.336,78.440)
N1: (58.376,83.971,79.707)
O4: (57.355,87.803,80.301)
O2: (58.507,84.469,77.491)
C6: (58.105,84.417,80.979)
C5: (57.743,85.677,81.244)
O3': (62.051,81.688,80.695)
Image (generated by PyMOL):