Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2440:A2494
Extra
PDB:
ATOM 1 O3' G A2439 -83.701 -66.651 14.070 1.00 0.01 O
ATOM 2 P G A2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 3 OP1 G A2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 4 OP2 G A2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 5 O5' G A2440 -83.055 -67.821 11.986 1.00 0.01 O
ATOM 6 C5' G A2440 -82.633 -66.663 11.304 1.00 0.01 C
ATOM 7 C4' G A2440 -83.772 -66.016 10.576 1.00 0.01 C
ATOM 8 O4' G A2440 -83.283 -64.869 9.858 1.00 0.01 O
ATOM 9 C3' G A2440 -84.461 -66.874 9.534 1.00 0.01 C
ATOM 10 O3' G A2440 -85.786 -66.426 9.399 1.00 0.01 O
ATOM 11 C2' G A2440 -83.745 -66.469 8.290 1.00 0.01 C
ATOM 12 O2' G A2440 -84.456 -66.757 7.120 1.00 0.01 O
ATOM 13 C1' G A2440 -83.673 -64.985 8.531 1.00 0.01 C
ATOM 14 N9 G A2440 -82.721 -64.288 7.710 1.00 0.01 N
ATOM 15 C8 G A2440 -81.420 -64.602 7.570 1.00 0.01 C
ATOM 16 N7 G A2440 -80.828 -63.800 6.759 1.00 0.01 N
ATOM 17 C5 G A2440 -81.810 -62.943 6.363 1.00 0.01 C
ATOM 18 C6 G A2440 -81.692 -61.880 5.474 1.00 0.01 C
ATOM 19 O6 G A2440 -80.642 -61.540 4.909 1.00 0.01 O
ATOM 20 N1 G A2440 -82.922 -61.220 5.331 1.00 0.01 N
ATOM 21 C2 G A2440 -84.095 -61.560 5.986 1.00 0.01 C
ATOM 22 N2 G A2440 -85.159 -60.784 5.692 1.00 0.01 N
ATOM 23 N3 G A2440 -84.195 -62.583 6.826 1.00 0.01 N
ATOM 24 C4 G A2440 -83.008 -63.210 6.945 1.00 0.01 C
ATOM 25 P A A2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 26 OP1 A A2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 27 OP2 A A2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 28 O5' A A2441 -87.198 -66.707 11.396 1.00 0.01 O
TER
ATOM 1 O3' U B2493 -78.280 -67.699 6.724 1.00 0.01 O
ATOM 2 P C B2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 3 OP1 C B2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 4 OP2 C B2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 5 O5' C B2494 -78.531 -65.913 8.418 1.00 0.01 O
ATOM 6 C5' C B2494 -77.428 -65.129 8.025 1.00 0.01 C
ATOM 7 C4' C B2494 -77.338 -63.840 8.798 1.00 0.01 C
ATOM 8 O4' C B2494 -78.430 -62.984 8.449 1.00 0.01 O
ATOM 9 C3' C B2494 -77.365 -63.943 10.324 1.00 0.01 C
ATOM 10 O3' C B2494 -76.051 -64.055 10.849 1.00 0.01 O
ATOM 11 C2' C B2494 -78.075 -62.664 10.777 1.00 0.01 C
ATOM 12 O2' C B2494 -77.142 -61.757 11.306 1.00 0.01 O
ATOM 13 C1' C B2494 -78.644 -62.073 9.480 1.00 0.01 C
ATOM 14 N1 C B2494 -80.076 -61.759 9.539 1.00 0.01 N
ATOM 15 C2 C B2494 -80.423 -60.619 8.840 1.00 0.01 C
ATOM 16 O2 C B2494 -79.526 -59.985 8.290 1.00 0.01 O
ATOM 17 N3 C B2494 -81.697 -60.208 8.791 1.00 0.01 N
ATOM 18 C4 C B2494 -82.615 -60.916 9.402 1.00 0.01 C
ATOM 19 N4 C B2494 -83.845 -60.468 9.314 1.00 0.01 N
ATOM 20 C5 C B2494 -82.321 -62.097 10.125 1.00 0.01 C
ATOM 21 C6 C B2494 -81.037 -62.488 10.160 1.00 0.01 C
ATOM 22 P G B2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 23 OP1 G B2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 24 OP2 G B2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 25 O5' G B2495 -74.163 -64.814 12.306 1.00 0.01 O
TER
ATOM 2 P G A2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 3 OP1 G A2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 4 OP2 G A2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 5 O5' G A2440 -83.055 -67.821 11.986 1.00 0.01 O
ATOM 6 C5' G A2440 -82.633 -66.663 11.304 1.00 0.01 C
ATOM 7 C4' G A2440 -83.772 -66.016 10.576 1.00 0.01 C
ATOM 8 O4' G A2440 -83.283 -64.869 9.858 1.00 0.01 O
ATOM 9 C3' G A2440 -84.461 -66.874 9.534 1.00 0.01 C
ATOM 10 O3' G A2440 -85.786 -66.426 9.399 1.00 0.01 O
ATOM 11 C2' G A2440 -83.745 -66.469 8.290 1.00 0.01 C
ATOM 12 O2' G A2440 -84.456 -66.757 7.120 1.00 0.01 O
ATOM 13 C1' G A2440 -83.673 -64.985 8.531 1.00 0.01 C
ATOM 14 N9 G A2440 -82.721 -64.288 7.710 1.00 0.01 N
ATOM 15 C8 G A2440 -81.420 -64.602 7.570 1.00 0.01 C
ATOM 16 N7 G A2440 -80.828 -63.800 6.759 1.00 0.01 N
ATOM 17 C5 G A2440 -81.810 -62.943 6.363 1.00 0.01 C
ATOM 18 C6 G A2440 -81.692 -61.880 5.474 1.00 0.01 C
ATOM 19 O6 G A2440 -80.642 -61.540 4.909 1.00 0.01 O
ATOM 20 N1 G A2440 -82.922 -61.220 5.331 1.00 0.01 N
ATOM 21 C2 G A2440 -84.095 -61.560 5.986 1.00 0.01 C
ATOM 22 N2 G A2440 -85.159 -60.784 5.692 1.00 0.01 N
ATOM 23 N3 G A2440 -84.195 -62.583 6.826 1.00 0.01 N
ATOM 24 C4 G A2440 -83.008 -63.210 6.945 1.00 0.01 C
ATOM 25 P A A2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 26 OP1 A A2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 27 OP2 A A2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 28 O5' A A2441 -87.198 -66.707 11.396 1.00 0.01 O
TER
ATOM 1 O3' U B2493 -78.280 -67.699 6.724 1.00 0.01 O
ATOM 2 P C B2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 3 OP1 C B2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 4 OP2 C B2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 5 O5' C B2494 -78.531 -65.913 8.418 1.00 0.01 O
ATOM 6 C5' C B2494 -77.428 -65.129 8.025 1.00 0.01 C
ATOM 7 C4' C B2494 -77.338 -63.840 8.798 1.00 0.01 C
ATOM 8 O4' C B2494 -78.430 -62.984 8.449 1.00 0.01 O
ATOM 9 C3' C B2494 -77.365 -63.943 10.324 1.00 0.01 C
ATOM 10 O3' C B2494 -76.051 -64.055 10.849 1.00 0.01 O
ATOM 11 C2' C B2494 -78.075 -62.664 10.777 1.00 0.01 C
ATOM 12 O2' C B2494 -77.142 -61.757 11.306 1.00 0.01 O
ATOM 13 C1' C B2494 -78.644 -62.073 9.480 1.00 0.01 C
ATOM 14 N1 C B2494 -80.076 -61.759 9.539 1.00 0.01 N
ATOM 15 C2 C B2494 -80.423 -60.619 8.840 1.00 0.01 C
ATOM 16 O2 C B2494 -79.526 -59.985 8.290 1.00 0.01 O
ATOM 17 N3 C B2494 -81.697 -60.208 8.791 1.00 0.01 N
ATOM 18 C4 C B2494 -82.615 -60.916 9.402 1.00 0.01 C
ATOM 19 N4 C B2494 -83.845 -60.468 9.314 1.00 0.01 N
ATOM 20 C5 C B2494 -82.321 -62.097 10.125 1.00 0.01 C
ATOM 21 C6 C B2494 -81.037 -62.488 10.160 1.00 0.01 C
ATOM 22 P G B2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 23 OP1 G B2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 24 OP2 G B2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 25 O5' G B2495 -74.163 -64.814 12.306 1.00 0.01 O
TER
Atoms:
OP1: (-83.622,-69.115,13.984)
OP2: (-81.505,-67.787,13.899)
C3': (-84.461,-66.874,9.534)
C1': (-83.673,-64.985,8.531)
C5': (-82.633,-66.663,11.304)
O6: (-80.642,-61.540,4.909)
O4': (-83.283,-64.869,9.858)
C8: (-81.420,-64.602,7.570)
C2: (-84.095,-61.560,5.986)
C6: (-81.692,-61.880,5.474)
C5: (-81.810,-62.943,6.363)
C4: (-83.008,-63.210,6.945)
P: (-82.905,-67.938,13.532)
C4': (-83.772,-66.016,10.576)
C2': (-83.745,-66.469,8.290)
O2': (-84.456,-66.757,7.120)
N1: (-82.922,-61.220,5.331)
N2: (-85.159,-60.784,5.692)
N3: (-84.195,-62.583,6.826)
N7: (-80.828,-63.800,6.759)
N9: (-82.721,-64.288,7.710)
O5': (-83.055,-67.821,11.986)
O3': (-85.786,-66.426,9.399)
OP2: (-81.505,-67.787,13.899)
C3': (-84.461,-66.874,9.534)
C1': (-83.673,-64.985,8.531)
C5': (-82.633,-66.663,11.304)
O6: (-80.642,-61.540,4.909)
O4': (-83.283,-64.869,9.858)
C8: (-81.420,-64.602,7.570)
C2: (-84.095,-61.560,5.986)
C6: (-81.692,-61.880,5.474)
C5: (-81.810,-62.943,6.363)
C4: (-83.008,-63.210,6.945)
P: (-82.905,-67.938,13.532)
C4': (-83.772,-66.016,10.576)
C2': (-83.745,-66.469,8.290)
O2': (-84.456,-66.757,7.120)
N1: (-82.922,-61.220,5.331)
N2: (-85.159,-60.784,5.692)
N3: (-84.195,-62.583,6.826)
N7: (-80.828,-63.800,6.759)
N9: (-82.721,-64.288,7.710)
O5': (-83.055,-67.821,11.986)
O3': (-85.786,-66.426,9.399)
C2: (-80.423,-60.619,8.840)
OP1: (-77.266,-68.002,8.922)
OP2: (-79.758,-68.058,8.651)
C4: (-82.615,-60.916,9.402)
O5': (-78.531,-65.913,8.418)
C3': (-77.365,-63.943,10.324)
C1': (-78.644,-62.073,9.480)
O4': (-78.430,-62.984,8.449)
C5': (-77.428,-65.129,8.025)
P: (-78.476,-67.485,8.283)
O2: (-79.526,-59.985,8.290)
C4': (-77.338,-63.840,8.798)
C2': (-78.075,-62.664,10.777)
O2': (-77.142,-61.757,11.306)
N1: (-80.076,-61.759,9.539)
N3: (-81.697,-60.208,8.791)
N4: (-83.845,-60.468,9.314)
C6: (-81.037,-62.488,10.160)
C5: (-82.321,-62.097,10.125)
O3': (-76.051,-64.055,10.849)
OP1: (-77.266,-68.002,8.922)
OP2: (-79.758,-68.058,8.651)
C4: (-82.615,-60.916,9.402)
O5': (-78.531,-65.913,8.418)
C3': (-77.365,-63.943,10.324)
C1': (-78.644,-62.073,9.480)
O4': (-78.430,-62.984,8.449)
C5': (-77.428,-65.129,8.025)
P: (-78.476,-67.485,8.283)
O2: (-79.526,-59.985,8.290)
C4': (-77.338,-63.840,8.798)
C2': (-78.075,-62.664,10.777)
O2': (-77.142,-61.757,11.306)
N1: (-80.076,-61.759,9.539)
N3: (-81.697,-60.208,8.791)
N4: (-83.845,-60.468,9.314)
C6: (-81.037,-62.488,10.160)
C5: (-82.321,-62.097,10.125)
O3': (-76.051,-64.055,10.849)
Image (generated by PyMOL):