Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02417:02395
Extra
PDB:
ATOM 1 O3' C A2416 53.384 117.021 143.213 1.00 45.29 O
ATOM 2 P A A2417 53.413 117.389 141.648 1.00 46.80 P
ATOM 3 OP1 A A2417 52.000 117.379 141.194 1.00 46.38 O
ATOM 4 OP2 A A2417 54.409 116.527 140.957 1.00 45.44 O
ATOM 5 O5' A A2417 53.970 118.880 141.629 1.00 44.47 O
ATOM 6 C5' A A2417 53.224 119.944 142.229 1.00 46.54 C
ATOM 7 C4' A A2417 54.058 121.194 142.284 1.00 48.30 C
ATOM 8 O4' A A2417 55.225 120.947 143.107 1.00 49.40 O
ATOM 9 C3' A A2417 54.641 121.670 140.967 1.00 49.36 C
ATOM 10 O3' A A2417 53.667 122.396 140.209 1.00 50.91 O
ATOM 11 C2' A A2417 55.807 122.532 141.442 1.00 48.67 C
ATOM 12 O2' A A2417 55.385 123.795 141.914 1.00 48.44 O
ATOM 13 C1' A A2417 56.313 121.723 142.640 1.00 48.09 C
ATOM 14 N9 A A2417 57.423 120.818 142.335 1.00 47.29 N
ATOM 15 C8 A A2417 57.356 119.496 141.966 1.00 45.91 C
ATOM 16 N7 A A2417 58.525 118.950 141.740 1.00 44.65 N
ATOM 17 C5 A A2417 59.426 119.979 141.978 1.00 45.44 C
ATOM 18 C6 A A2417 60.833 120.045 141.898 1.00 45.87 C
ATOM 19 N6 A A2417 61.603 119.013 141.530 1.00 46.54 N
ATOM 20 N1 A A2417 61.426 121.220 142.206 1.00 44.89 N
ATOM 21 C2 A A2417 60.652 122.253 142.562 1.00 45.95 C
ATOM 22 N3 A A2417 59.322 122.317 142.667 1.00 46.50 N
ATOM 23 C4 A A2417 58.763 121.133 142.355 1.00 46.30 C
ATOM 24 P A A2418 53.736 122.396 138.597 1.00 51.18 P
ATOM 25 OP1 A A2418 52.583 123.180 138.090 1.00 50.27 O
ATOM 26 OP2 A A2418 53.934 121.007 138.135 1.00 50.17 O
ATOM 27 O5' A A2418 55.058 123.218 138.265 1.00 49.32 O
TER
ATOM 1 O3' A B2394 63.007 115.278 135.869 1.00 43.65 O
ATOM 2 P U B2395 63.017 115.934 137.330 1.00 46.47 P
ATOM 3 OP1 U B2395 64.314 115.566 137.931 1.00 46.20 O
ATOM 4 OP2 U B2395 61.766 115.570 138.028 1.00 47.73 O
ATOM 5 O5' U B2395 63.019 117.498 137.042 1.00 44.57 O
ATOM 6 C5' U B2395 64.051 118.091 136.234 1.00 44.52 C
ATOM 7 C4' U B2395 64.767 119.164 137.013 1.00 44.49 C
ATOM 8 O4' U B2395 63.896 120.309 137.207 1.00 44.99 O
ATOM 9 C3' U B2395 65.225 118.761 138.403 1.00 45.30 C
ATOM 10 O3' U B2395 66.335 119.561 138.721 1.00 48.00 O
ATOM 11 C2' U B2395 64.062 119.202 139.275 1.00 44.11 C
ATOM 12 O2' U B2395 64.470 119.429 140.607 1.00 44.16 O
ATOM 13 C1' U B2395 63.659 120.508 138.585 1.00 42.41 C
ATOM 14 N1 U B2395 62.241 120.865 138.738 1.00 41.29 N
ATOM 15 C2 U B2395 61.924 122.175 139.058 1.00 40.20 C
ATOM 16 O2 U B2395 62.760 123.051 139.218 1.00 39.54 O
ATOM 17 N3 U B2395 60.584 122.423 139.182 1.00 39.17 N
ATOM 18 C4 U B2395 59.557 121.521 139.022 1.00 39.51 C
ATOM 19 O4 U B2395 58.410 121.869 139.270 1.00 41.66 O
ATOM 20 C5 U B2395 59.963 120.201 138.681 1.00 39.82 C
ATOM 21 C6 U B2395 61.254 119.922 138.559 1.00 40.77 C
ATOM 22 P C B2396 67.738 118.880 139.015 1.00 49.08 P
ATOM 23 OP1 C B2396 68.252 118.295 137.756 1.00 50.52 O
ATOM 24 OP2 C B2396 67.496 118.007 140.182 1.00 49.52 O
ATOM 25 O5' C B2396 68.629 120.131 139.420 1.00 47.46 O
TER
ATOM 2 P A A2417 53.413 117.389 141.648 1.00 46.80 P
ATOM 3 OP1 A A2417 52.000 117.379 141.194 1.00 46.38 O
ATOM 4 OP2 A A2417 54.409 116.527 140.957 1.00 45.44 O
ATOM 5 O5' A A2417 53.970 118.880 141.629 1.00 44.47 O
ATOM 6 C5' A A2417 53.224 119.944 142.229 1.00 46.54 C
ATOM 7 C4' A A2417 54.058 121.194 142.284 1.00 48.30 C
ATOM 8 O4' A A2417 55.225 120.947 143.107 1.00 49.40 O
ATOM 9 C3' A A2417 54.641 121.670 140.967 1.00 49.36 C
ATOM 10 O3' A A2417 53.667 122.396 140.209 1.00 50.91 O
ATOM 11 C2' A A2417 55.807 122.532 141.442 1.00 48.67 C
ATOM 12 O2' A A2417 55.385 123.795 141.914 1.00 48.44 O
ATOM 13 C1' A A2417 56.313 121.723 142.640 1.00 48.09 C
ATOM 14 N9 A A2417 57.423 120.818 142.335 1.00 47.29 N
ATOM 15 C8 A A2417 57.356 119.496 141.966 1.00 45.91 C
ATOM 16 N7 A A2417 58.525 118.950 141.740 1.00 44.65 N
ATOM 17 C5 A A2417 59.426 119.979 141.978 1.00 45.44 C
ATOM 18 C6 A A2417 60.833 120.045 141.898 1.00 45.87 C
ATOM 19 N6 A A2417 61.603 119.013 141.530 1.00 46.54 N
ATOM 20 N1 A A2417 61.426 121.220 142.206 1.00 44.89 N
ATOM 21 C2 A A2417 60.652 122.253 142.562 1.00 45.95 C
ATOM 22 N3 A A2417 59.322 122.317 142.667 1.00 46.50 N
ATOM 23 C4 A A2417 58.763 121.133 142.355 1.00 46.30 C
ATOM 24 P A A2418 53.736 122.396 138.597 1.00 51.18 P
ATOM 25 OP1 A A2418 52.583 123.180 138.090 1.00 50.27 O
ATOM 26 OP2 A A2418 53.934 121.007 138.135 1.00 50.17 O
ATOM 27 O5' A A2418 55.058 123.218 138.265 1.00 49.32 O
TER
ATOM 1 O3' A B2394 63.007 115.278 135.869 1.00 43.65 O
ATOM 2 P U B2395 63.017 115.934 137.330 1.00 46.47 P
ATOM 3 OP1 U B2395 64.314 115.566 137.931 1.00 46.20 O
ATOM 4 OP2 U B2395 61.766 115.570 138.028 1.00 47.73 O
ATOM 5 O5' U B2395 63.019 117.498 137.042 1.00 44.57 O
ATOM 6 C5' U B2395 64.051 118.091 136.234 1.00 44.52 C
ATOM 7 C4' U B2395 64.767 119.164 137.013 1.00 44.49 C
ATOM 8 O4' U B2395 63.896 120.309 137.207 1.00 44.99 O
ATOM 9 C3' U B2395 65.225 118.761 138.403 1.00 45.30 C
ATOM 10 O3' U B2395 66.335 119.561 138.721 1.00 48.00 O
ATOM 11 C2' U B2395 64.062 119.202 139.275 1.00 44.11 C
ATOM 12 O2' U B2395 64.470 119.429 140.607 1.00 44.16 O
ATOM 13 C1' U B2395 63.659 120.508 138.585 1.00 42.41 C
ATOM 14 N1 U B2395 62.241 120.865 138.738 1.00 41.29 N
ATOM 15 C2 U B2395 61.924 122.175 139.058 1.00 40.20 C
ATOM 16 O2 U B2395 62.760 123.051 139.218 1.00 39.54 O
ATOM 17 N3 U B2395 60.584 122.423 139.182 1.00 39.17 N
ATOM 18 C4 U B2395 59.557 121.521 139.022 1.00 39.51 C
ATOM 19 O4 U B2395 58.410 121.869 139.270 1.00 41.66 O
ATOM 20 C5 U B2395 59.963 120.201 138.681 1.00 39.82 C
ATOM 21 C6 U B2395 61.254 119.922 138.559 1.00 40.77 C
ATOM 22 P C B2396 67.738 118.880 139.015 1.00 49.08 P
ATOM 23 OP1 C B2396 68.252 118.295 137.756 1.00 50.52 O
ATOM 24 OP2 C B2396 67.496 118.007 140.182 1.00 49.52 O
ATOM 25 O5' C B2396 68.629 120.131 139.420 1.00 47.46 O
TER
Atoms:
OP1: (52.000,117.379,141.194)
OP2: (54.409,116.527,140.957)
C3': (54.641,121.670,140.967)
C1': (56.313,121.723,142.640)
C5': (53.224,119.944,142.229)
O4': (55.225,120.947,143.107)
C8: (57.356,119.496,141.966)
O2': (55.385,123.795,141.914)
C6: (60.833,120.045,141.898)
C5: (59.426,119.979,141.978)
C4: (58.763,121.133,142.355)
P: (53.413,117.389,141.648)
C4': (54.058,121.194,142.284)
C2': (55.807,122.532,141.442)
C2: (60.652,122.253,142.562)
N1: (61.426,121.220,142.206)
N3: (59.322,122.317,142.667)
N6: (61.603,119.013,141.530)
N7: (58.525,118.950,141.740)
N9: (57.423,120.818,142.335)
O5': (53.970,118.880,141.629)
O3': (53.667,122.396,140.209)
OP2: (54.409,116.527,140.957)
C3': (54.641,121.670,140.967)
C1': (56.313,121.723,142.640)
C5': (53.224,119.944,142.229)
O4': (55.225,120.947,143.107)
C8: (57.356,119.496,141.966)
O2': (55.385,123.795,141.914)
C6: (60.833,120.045,141.898)
C5: (59.426,119.979,141.978)
C4: (58.763,121.133,142.355)
P: (53.413,117.389,141.648)
C4': (54.058,121.194,142.284)
C2': (55.807,122.532,141.442)
C2: (60.652,122.253,142.562)
N1: (61.426,121.220,142.206)
N3: (59.322,122.317,142.667)
N6: (61.603,119.013,141.530)
N7: (58.525,118.950,141.740)
N9: (57.423,120.818,142.335)
O5': (53.970,118.880,141.629)
O3': (53.667,122.396,140.209)
C4: (59.557,121.521,139.022)
N3: (60.584,122.423,139.182)
OP1: (64.314,115.566,137.931)
OP2: (61.766,115.570,138.028)
C2: (61.924,122.175,139.058)
C1': (63.659,120.508,138.585)
C3': (65.225,118.761,138.403)
O5': (63.019,117.498,137.042)
O4': (63.896,120.309,137.207)
C5': (64.051,118.091,136.234)
P: (63.017,115.934,137.330)
C4': (64.767,119.164,137.013)
C2': (64.062,119.202,139.275)
O2': (64.470,119.429,140.607)
N1: (62.241,120.865,138.738)
O4: (58.410,121.869,139.270)
O2: (62.760,123.051,139.218)
C6: (61.254,119.922,138.559)
C5: (59.963,120.201,138.681)
O3': (66.335,119.561,138.721)
N3: (60.584,122.423,139.182)
OP1: (64.314,115.566,137.931)
OP2: (61.766,115.570,138.028)
C2: (61.924,122.175,139.058)
C1': (63.659,120.508,138.585)
C3': (65.225,118.761,138.403)
O5': (63.019,117.498,137.042)
O4': (63.896,120.309,137.207)
C5': (64.051,118.091,136.234)
P: (63.017,115.934,137.330)
C4': (64.767,119.164,137.013)
C2': (64.062,119.202,139.275)
O2': (64.470,119.429,140.607)
N1: (62.241,120.865,138.738)
O4: (58.410,121.869,139.270)
O2: (62.760,123.051,139.218)
C6: (61.254,119.922,138.559)
C5: (59.963,120.201,138.681)
O3': (66.335,119.561,138.721)
Image (generated by PyMOL):