Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21227:21217
Extra
PDB:
ATOM 1 O3' A A1226 -58.043 -51.621 9.050 1.00 91.32 O
ATOM 2 P G A1227 -58.921 -51.163 7.776 1.00107.02 P
ATOM 3 OP1 G A1227 -60.275 -50.796 8.283 1.00107.08 O
ATOM 4 OP2 G A1227 -58.805 -52.242 6.766 1.00107.45 O
ATOM 5 O5' G A1227 -58.177 -49.874 7.242 1.00107.03 O
ATOM 6 C5' G A1227 -58.699 -49.150 6.138 1.00107.54 C
ATOM 7 C4' G A1227 -58.085 -47.784 6.046 1.00107.42 C
ATOM 8 O4' G A1227 -57.484 -47.611 4.742 1.00107.85 O
ATOM 9 C3' G A1227 -59.046 -46.615 6.240 1.00107.50 C
ATOM 10 O3' G A1227 -58.402 -45.605 7.002 1.00107.04 O
ATOM 11 C2' G A1227 -59.271 -46.095 4.827 1.00108.14 C
ATOM 12 O2' G A1227 -59.562 -44.713 4.774 1.00108.22 O
ATOM 13 C1' G A1227 -57.928 -46.398 4.179 1.00108.16 C
ATOM 14 N9 G A1227 -57.956 -46.547 2.724 1.00108.81 N
ATOM 15 C8 G A1227 -58.594 -47.429 1.875 1.00109.32 C
ATOM 16 N7 G A1227 -58.285 -47.231 0.613 1.00109.84 N
ATOM 17 C5 G A1227 -57.384 -46.165 0.647 1.00109.66 C
ATOM 18 C6 G A1227 -56.677 -45.467 -0.375 1.00110.02 C
ATOM 19 O6 G A1227 -56.682 -45.638 -1.602 1.00110.62 O
ATOM 20 N1 G A1227 -55.884 -44.462 0.184 1.00109.63 N
ATOM 21 C2 G A1227 -55.743 -44.134 1.510 1.00108.98 C
ATOM 22 N2 G A1227 -54.920 -43.122 1.823 1.00108.71 N
ATOM 23 N3 G A1227 -56.389 -44.773 2.460 1.00108.64 N
ATOM 24 C4 G A1227 -57.173 -45.753 1.950 1.00109.01 C
ATOM 25 P C A1228 -58.993 -45.193 8.424 1.00 87.36 P
ATOM 26 OP1 C A1228 -59.007 -46.418 9.261 1.00 87.06 O
ATOM 27 OP2 C A1228 -60.283 -44.499 8.161 1.00 87.73 O
ATOM 28 O5' C A1228 -57.902 -44.152 8.980 1.00 86.90 O
TER
ATOM 1 O3' A B1216 -62.257 -49.952 2.519 1.00101.07 O
ATOM 2 P C B1217 -61.104 -51.062 2.308 1.00105.53 P
ATOM 3 OP1 C B1217 -61.390 -52.169 3.251 1.00105.22 O
ATOM 4 OP2 C B1217 -59.777 -50.377 2.385 1.00105.20 O
ATOM 5 O5' C B1217 -61.379 -51.543 0.830 1.00106.25 O
ATOM 6 C5' C B1217 -62.151 -52.684 0.570 1.00106.56 C
ATOM 7 C4' C B1217 -61.726 -53.282 -0.721 1.00107.06 C
ATOM 8 O4' C B1217 -61.669 -52.242 -1.724 1.00107.49 O
ATOM 9 C3' C B1217 -60.328 -53.847 -0.728 1.00106.79 C
ATOM 10 O3' C B1217 -60.255 -55.129 -0.145 1.00106.57 O
ATOM 11 C2' C B1217 -59.972 -53.826 -2.201 1.00107.39 C
ATOM 12 O2' C B1217 -60.554 -54.932 -2.864 1.00107.85 O
ATOM 13 C1' C B1217 -60.678 -52.556 -2.671 1.00107.73 C
ATOM 14 N1 C B1217 -59.753 -51.422 -2.795 1.00107.59 N
ATOM 15 C2 C B1217 -59.102 -51.319 -4.004 1.00108.05 C
ATOM 16 O2 C B1217 -59.400 -52.176 -4.828 1.00108.51 O
ATOM 17 N3 C B1217 -58.208 -50.332 -4.251 1.00108.00 N
ATOM 18 C4 C B1217 -57.962 -49.438 -3.291 1.00107.48 C
ATOM 19 N4 C B1217 -57.088 -48.461 -3.534 1.00107.44 N
ATOM 20 C5 C B1217 -58.619 -49.516 -2.023 1.00106.98 C
ATOM 21 C6 C B1217 -59.501 -50.515 -1.817 1.00107.06 C
ATOM 22 P A B1218 -59.092 -55.470 0.905 1.00115.39 P
ATOM 23 OP1 A B1218 -59.408 -56.810 1.474 1.00115.28 O
ATOM 24 OP2 A B1218 -58.973 -54.300 1.833 1.00114.91 O
ATOM 25 O5' A B1218 -57.789 -55.554 -0.021 1.00115.56 O
TER
ATOM 2 P G A1227 -58.921 -51.163 7.776 1.00107.02 P
ATOM 3 OP1 G A1227 -60.275 -50.796 8.283 1.00107.08 O
ATOM 4 OP2 G A1227 -58.805 -52.242 6.766 1.00107.45 O
ATOM 5 O5' G A1227 -58.177 -49.874 7.242 1.00107.03 O
ATOM 6 C5' G A1227 -58.699 -49.150 6.138 1.00107.54 C
ATOM 7 C4' G A1227 -58.085 -47.784 6.046 1.00107.42 C
ATOM 8 O4' G A1227 -57.484 -47.611 4.742 1.00107.85 O
ATOM 9 C3' G A1227 -59.046 -46.615 6.240 1.00107.50 C
ATOM 10 O3' G A1227 -58.402 -45.605 7.002 1.00107.04 O
ATOM 11 C2' G A1227 -59.271 -46.095 4.827 1.00108.14 C
ATOM 12 O2' G A1227 -59.562 -44.713 4.774 1.00108.22 O
ATOM 13 C1' G A1227 -57.928 -46.398 4.179 1.00108.16 C
ATOM 14 N9 G A1227 -57.956 -46.547 2.724 1.00108.81 N
ATOM 15 C8 G A1227 -58.594 -47.429 1.875 1.00109.32 C
ATOM 16 N7 G A1227 -58.285 -47.231 0.613 1.00109.84 N
ATOM 17 C5 G A1227 -57.384 -46.165 0.647 1.00109.66 C
ATOM 18 C6 G A1227 -56.677 -45.467 -0.375 1.00110.02 C
ATOM 19 O6 G A1227 -56.682 -45.638 -1.602 1.00110.62 O
ATOM 20 N1 G A1227 -55.884 -44.462 0.184 1.00109.63 N
ATOM 21 C2 G A1227 -55.743 -44.134 1.510 1.00108.98 C
ATOM 22 N2 G A1227 -54.920 -43.122 1.823 1.00108.71 N
ATOM 23 N3 G A1227 -56.389 -44.773 2.460 1.00108.64 N
ATOM 24 C4 G A1227 -57.173 -45.753 1.950 1.00109.01 C
ATOM 25 P C A1228 -58.993 -45.193 8.424 1.00 87.36 P
ATOM 26 OP1 C A1228 -59.007 -46.418 9.261 1.00 87.06 O
ATOM 27 OP2 C A1228 -60.283 -44.499 8.161 1.00 87.73 O
ATOM 28 O5' C A1228 -57.902 -44.152 8.980 1.00 86.90 O
TER
ATOM 1 O3' A B1216 -62.257 -49.952 2.519 1.00101.07 O
ATOM 2 P C B1217 -61.104 -51.062 2.308 1.00105.53 P
ATOM 3 OP1 C B1217 -61.390 -52.169 3.251 1.00105.22 O
ATOM 4 OP2 C B1217 -59.777 -50.377 2.385 1.00105.20 O
ATOM 5 O5' C B1217 -61.379 -51.543 0.830 1.00106.25 O
ATOM 6 C5' C B1217 -62.151 -52.684 0.570 1.00106.56 C
ATOM 7 C4' C B1217 -61.726 -53.282 -0.721 1.00107.06 C
ATOM 8 O4' C B1217 -61.669 -52.242 -1.724 1.00107.49 O
ATOM 9 C3' C B1217 -60.328 -53.847 -0.728 1.00106.79 C
ATOM 10 O3' C B1217 -60.255 -55.129 -0.145 1.00106.57 O
ATOM 11 C2' C B1217 -59.972 -53.826 -2.201 1.00107.39 C
ATOM 12 O2' C B1217 -60.554 -54.932 -2.864 1.00107.85 O
ATOM 13 C1' C B1217 -60.678 -52.556 -2.671 1.00107.73 C
ATOM 14 N1 C B1217 -59.753 -51.422 -2.795 1.00107.59 N
ATOM 15 C2 C B1217 -59.102 -51.319 -4.004 1.00108.05 C
ATOM 16 O2 C B1217 -59.400 -52.176 -4.828 1.00108.51 O
ATOM 17 N3 C B1217 -58.208 -50.332 -4.251 1.00108.00 N
ATOM 18 C4 C B1217 -57.962 -49.438 -3.291 1.00107.48 C
ATOM 19 N4 C B1217 -57.088 -48.461 -3.534 1.00107.44 N
ATOM 20 C5 C B1217 -58.619 -49.516 -2.023 1.00106.98 C
ATOM 21 C6 C B1217 -59.501 -50.515 -1.817 1.00107.06 C
ATOM 22 P A B1218 -59.092 -55.470 0.905 1.00115.39 P
ATOM 23 OP1 A B1218 -59.408 -56.810 1.474 1.00115.28 O
ATOM 24 OP2 A B1218 -58.973 -54.300 1.833 1.00114.91 O
ATOM 25 O5' A B1218 -57.789 -55.554 -0.021 1.00115.56 O
TER
Atoms:
OP1: (-60.275,-50.796,8.283)
OP2: (-58.805,-52.242,6.766)
C3': (-59.046,-46.615,6.240)
C1': (-57.928,-46.398,4.179)
C5': (-58.699,-49.150,6.138)
O6: (-56.682,-45.638,-1.602)
O4': (-57.484,-47.611,4.742)
C8: (-58.594,-47.429,1.875)
C2: (-55.743,-44.134,1.510)
C6: (-56.677,-45.467,-0.375)
C5: (-57.384,-46.165,0.647)
C4: (-57.173,-45.753,1.950)
P: (-58.921,-51.163,7.776)
C4': (-58.085,-47.784,6.046)
C2': (-59.271,-46.095,4.827)
O2': (-59.562,-44.713,4.774)
N1: (-55.884,-44.462,0.184)
N2: (-54.920,-43.122,1.823)
N3: (-56.389,-44.773,2.460)
N7: (-58.285,-47.231,0.613)
N9: (-57.956,-46.547,2.724)
O5': (-58.177,-49.874,7.242)
O3': (-58.402,-45.605,7.002)
OP2: (-58.805,-52.242,6.766)
C3': (-59.046,-46.615,6.240)
C1': (-57.928,-46.398,4.179)
C5': (-58.699,-49.150,6.138)
O6: (-56.682,-45.638,-1.602)
O4': (-57.484,-47.611,4.742)
C8: (-58.594,-47.429,1.875)
C2: (-55.743,-44.134,1.510)
C6: (-56.677,-45.467,-0.375)
C5: (-57.384,-46.165,0.647)
C4: (-57.173,-45.753,1.950)
P: (-58.921,-51.163,7.776)
C4': (-58.085,-47.784,6.046)
C2': (-59.271,-46.095,4.827)
O2': (-59.562,-44.713,4.774)
N1: (-55.884,-44.462,0.184)
N2: (-54.920,-43.122,1.823)
N3: (-56.389,-44.773,2.460)
N7: (-58.285,-47.231,0.613)
N9: (-57.956,-46.547,2.724)
O5': (-58.177,-49.874,7.242)
O3': (-58.402,-45.605,7.002)
C2: (-59.102,-51.319,-4.004)
OP1: (-61.390,-52.169,3.251)
OP2: (-59.777,-50.377,2.385)
C4: (-57.962,-49.438,-3.291)
O5': (-61.379,-51.543,0.830)
C3': (-60.328,-53.847,-0.728)
C1': (-60.678,-52.556,-2.671)
O4': (-61.669,-52.242,-1.724)
C5': (-62.151,-52.684,0.570)
P: (-61.104,-51.062,2.308)
O2: (-59.400,-52.176,-4.828)
C4': (-61.726,-53.282,-0.721)
C2': (-59.972,-53.826,-2.201)
O2': (-60.554,-54.932,-2.864)
N1: (-59.753,-51.422,-2.795)
N3: (-58.208,-50.332,-4.251)
N4: (-57.088,-48.461,-3.534)
C6: (-59.501,-50.515,-1.817)
C5: (-58.619,-49.516,-2.023)
O3': (-60.255,-55.129,-0.145)
OP1: (-61.390,-52.169,3.251)
OP2: (-59.777,-50.377,2.385)
C4: (-57.962,-49.438,-3.291)
O5': (-61.379,-51.543,0.830)
C3': (-60.328,-53.847,-0.728)
C1': (-60.678,-52.556,-2.671)
O4': (-61.669,-52.242,-1.724)
C5': (-62.151,-52.684,0.570)
P: (-61.104,-51.062,2.308)
O2: (-59.400,-52.176,-4.828)
C4': (-61.726,-53.282,-0.721)
C2': (-59.972,-53.826,-2.201)
O2': (-60.554,-54.932,-2.864)
N1: (-59.753,-51.422,-2.795)
N3: (-58.208,-50.332,-4.251)
N4: (-57.088,-48.461,-3.534)
C6: (-59.501,-50.515,-1.817)
C5: (-58.619,-49.516,-2.023)
O3': (-60.255,-55.129,-0.145)
Image (generated by PyMOL):