Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2336:2338
Extra
PDB:
ATOM 1 O3' G A 335 -42.351 68.662 92.694 1.00 61.29 O
ATOM 2 P G A 336 -40.768 68.976 92.861 1.00 60.33 P
ATOM 3 OP1 G A 336 -40.405 68.628 94.268 1.00 60.34 O
ATOM 4 OP2 G A 336 -40.546 70.365 92.389 1.00 60.77 O
ATOM 5 O5' G A 336 -40.081 67.939 91.845 1.00 59.63 O
ATOM 6 C5' G A 336 -40.233 66.533 92.021 1.00 59.16 C
ATOM 7 C4' G A 336 -39.665 65.736 90.864 1.00 58.59 C
ATOM 8 O4' G A 336 -38.214 65.833 90.884 1.00 58.33 O
ATOM 9 C3' G A 336 -39.970 64.241 90.913 1.00 58.14 C
ATOM 10 O3' G A 336 -39.972 63.714 89.591 1.00 57.81 O
ATOM 11 C2' G A 336 -38.757 63.698 91.672 1.00 57.81 C
ATOM 12 O2' G A 336 -38.506 62.320 91.495 1.00 57.29 O
ATOM 13 C1' G A 336 -37.650 64.543 91.079 1.00 57.80 C
ATOM 14 N9 G A 336 -36.466 64.681 91.927 1.00 57.75 N
ATOM 15 C8 G A 336 -35.178 64.589 91.452 1.00 57.44 C
ATOM 16 N7 G A 336 -34.254 64.779 92.351 1.00 57.51 N
ATOM 17 C5 G A 336 -34.981 65.020 93.498 1.00 57.88 C
ATOM 18 C6 G A 336 -34.507 65.298 94.785 1.00 58.14 C
ATOM 19 O6 G A 336 -33.338 65.372 95.130 1.00 58.08 O
ATOM 20 N1 G A 336 -35.497 65.497 95.712 1.00 58.54 N
ATOM 21 C2 G A 336 -36.822 65.441 95.408 1.00 58.67 C
ATOM 22 N2 G A 336 -37.644 65.649 96.456 1.00 59.10 N
ATOM 23 N3 G A 336 -37.297 65.178 94.185 1.00 58.44 N
ATOM 24 C4 G A 336 -36.334 64.969 93.271 1.00 58.04 C
ATOM 25 P C A 337 -41.091 64.145 88.523 1.00 59.79 P
ATOM 26 OP1 C A 337 -42.102 64.922 89.229 1.00 60.37 O
ATOM 27 OP2 C A 337 -41.524 62.913 87.826 1.00 59.42 O
ATOM 28 O5' C A 337 -40.285 65.079 87.511 1.00 59.84 O
TER
ATOM 1 O3' C B 337 -36.873 64.772 85.495 1.00 58.89 O
ATOM 2 P C B 338 -35.904 64.052 86.529 1.00 53.28 P
ATOM 3 OP1 C B 338 -35.463 62.792 85.908 1.00 52.74 O
ATOM 4 OP2 C B 338 -36.620 63.994 87.808 1.00 53.49 O
ATOM 5 O5' C B 338 -34.692 65.067 86.631 1.00 53.43 O
ATOM 6 C5' C B 338 -33.960 65.429 85.479 1.00 53.36 C
ATOM 7 C4' C B 338 -33.185 66.697 85.691 1.00 53.72 C
ATOM 8 O4' C B 338 -34.103 67.784 85.918 1.00 54.27 O
ATOM 9 C3' C B 338 -32.275 66.755 86.911 1.00 53.71 C
ATOM 10 O3' C B 338 -31.051 66.080 86.734 1.00 53.30 O
ATOM 11 C2' C B 338 -32.099 68.246 87.088 1.00 54.26 C
ATOM 12 O2' C B 338 -31.216 68.749 86.091 1.00 54.26 O
ATOM 13 C1' C B 338 -33.506 68.739 86.770 1.00 54.61 C
ATOM 14 N1 C B 338 -34.342 68.882 87.970 1.00 54.90 N
ATOM 15 C2 C B 338 -34.229 70.051 88.712 1.00 55.42 C
ATOM 16 O2 C B 338 -33.376 70.846 88.319 1.00 55.57 O
ATOM 17 N3 C B 338 -35.034 70.261 89.798 1.00 55.75 N
ATOM 18 C4 C B 338 -35.934 69.324 90.144 1.00 55.56 C
ATOM 19 N4 C B 338 -36.685 69.502 91.232 1.00 55.91 N
ATOM 20 C5 C B 338 -36.085 68.120 89.381 1.00 55.03 C
ATOM 21 C6 C B 338 -35.275 67.944 88.314 1.00 54.72 C
ATOM 22 P U B 339 -30.340 65.383 87.986 1.00 53.68 P
ATOM 23 OP1 U B 339 -29.275 64.518 87.448 1.00 53.24 O
ATOM 24 OP2 U B 339 -31.416 64.767 88.799 1.00 53.67 O
ATOM 25 O5' U B 339 -29.695 66.609 88.764 1.00 54.14 O
TER
ATOM 2 P G A 336 -40.768 68.976 92.861 1.00 60.33 P
ATOM 3 OP1 G A 336 -40.405 68.628 94.268 1.00 60.34 O
ATOM 4 OP2 G A 336 -40.546 70.365 92.389 1.00 60.77 O
ATOM 5 O5' G A 336 -40.081 67.939 91.845 1.00 59.63 O
ATOM 6 C5' G A 336 -40.233 66.533 92.021 1.00 59.16 C
ATOM 7 C4' G A 336 -39.665 65.736 90.864 1.00 58.59 C
ATOM 8 O4' G A 336 -38.214 65.833 90.884 1.00 58.33 O
ATOM 9 C3' G A 336 -39.970 64.241 90.913 1.00 58.14 C
ATOM 10 O3' G A 336 -39.972 63.714 89.591 1.00 57.81 O
ATOM 11 C2' G A 336 -38.757 63.698 91.672 1.00 57.81 C
ATOM 12 O2' G A 336 -38.506 62.320 91.495 1.00 57.29 O
ATOM 13 C1' G A 336 -37.650 64.543 91.079 1.00 57.80 C
ATOM 14 N9 G A 336 -36.466 64.681 91.927 1.00 57.75 N
ATOM 15 C8 G A 336 -35.178 64.589 91.452 1.00 57.44 C
ATOM 16 N7 G A 336 -34.254 64.779 92.351 1.00 57.51 N
ATOM 17 C5 G A 336 -34.981 65.020 93.498 1.00 57.88 C
ATOM 18 C6 G A 336 -34.507 65.298 94.785 1.00 58.14 C
ATOM 19 O6 G A 336 -33.338 65.372 95.130 1.00 58.08 O
ATOM 20 N1 G A 336 -35.497 65.497 95.712 1.00 58.54 N
ATOM 21 C2 G A 336 -36.822 65.441 95.408 1.00 58.67 C
ATOM 22 N2 G A 336 -37.644 65.649 96.456 1.00 59.10 N
ATOM 23 N3 G A 336 -37.297 65.178 94.185 1.00 58.44 N
ATOM 24 C4 G A 336 -36.334 64.969 93.271 1.00 58.04 C
ATOM 25 P C A 337 -41.091 64.145 88.523 1.00 59.79 P
ATOM 26 OP1 C A 337 -42.102 64.922 89.229 1.00 60.37 O
ATOM 27 OP2 C A 337 -41.524 62.913 87.826 1.00 59.42 O
ATOM 28 O5' C A 337 -40.285 65.079 87.511 1.00 59.84 O
TER
ATOM 1 O3' C B 337 -36.873 64.772 85.495 1.00 58.89 O
ATOM 2 P C B 338 -35.904 64.052 86.529 1.00 53.28 P
ATOM 3 OP1 C B 338 -35.463 62.792 85.908 1.00 52.74 O
ATOM 4 OP2 C B 338 -36.620 63.994 87.808 1.00 53.49 O
ATOM 5 O5' C B 338 -34.692 65.067 86.631 1.00 53.43 O
ATOM 6 C5' C B 338 -33.960 65.429 85.479 1.00 53.36 C
ATOM 7 C4' C B 338 -33.185 66.697 85.691 1.00 53.72 C
ATOM 8 O4' C B 338 -34.103 67.784 85.918 1.00 54.27 O
ATOM 9 C3' C B 338 -32.275 66.755 86.911 1.00 53.71 C
ATOM 10 O3' C B 338 -31.051 66.080 86.734 1.00 53.30 O
ATOM 11 C2' C B 338 -32.099 68.246 87.088 1.00 54.26 C
ATOM 12 O2' C B 338 -31.216 68.749 86.091 1.00 54.26 O
ATOM 13 C1' C B 338 -33.506 68.739 86.770 1.00 54.61 C
ATOM 14 N1 C B 338 -34.342 68.882 87.970 1.00 54.90 N
ATOM 15 C2 C B 338 -34.229 70.051 88.712 1.00 55.42 C
ATOM 16 O2 C B 338 -33.376 70.846 88.319 1.00 55.57 O
ATOM 17 N3 C B 338 -35.034 70.261 89.798 1.00 55.75 N
ATOM 18 C4 C B 338 -35.934 69.324 90.144 1.00 55.56 C
ATOM 19 N4 C B 338 -36.685 69.502 91.232 1.00 55.91 N
ATOM 20 C5 C B 338 -36.085 68.120 89.381 1.00 55.03 C
ATOM 21 C6 C B 338 -35.275 67.944 88.314 1.00 54.72 C
ATOM 22 P U B 339 -30.340 65.383 87.986 1.00 53.68 P
ATOM 23 OP1 U B 339 -29.275 64.518 87.448 1.00 53.24 O
ATOM 24 OP2 U B 339 -31.416 64.767 88.799 1.00 53.67 O
ATOM 25 O5' U B 339 -29.695 66.609 88.764 1.00 54.14 O
TER
Atoms:
OP1: (-40.405,68.628,94.268)
OP2: (-40.546,70.365,92.389)
C3': (-39.970,64.241,90.913)
C1': (-37.650,64.543,91.079)
C5': (-40.233,66.533,92.021)
O6: (-33.338,65.372,95.130)
O4': (-38.214,65.833,90.884)
C8: (-35.178,64.589,91.452)
C2: (-36.822,65.441,95.408)
C6: (-34.507,65.298,94.785)
C5: (-34.981,65.020,93.498)
C4: (-36.334,64.969,93.271)
P: (-40.768,68.976,92.861)
C4': (-39.665,65.736,90.864)
C2': (-38.757,63.698,91.672)
O2': (-38.506,62.320,91.495)
N1: (-35.497,65.497,95.712)
N2: (-37.644,65.649,96.456)
N3: (-37.297,65.178,94.185)
N7: (-34.254,64.779,92.351)
N9: (-36.466,64.681,91.927)
O5': (-40.081,67.939,91.845)
O3': (-39.972,63.714,89.591)
OP2: (-40.546,70.365,92.389)
C3': (-39.970,64.241,90.913)
C1': (-37.650,64.543,91.079)
C5': (-40.233,66.533,92.021)
O6: (-33.338,65.372,95.130)
O4': (-38.214,65.833,90.884)
C8: (-35.178,64.589,91.452)
C2: (-36.822,65.441,95.408)
C6: (-34.507,65.298,94.785)
C5: (-34.981,65.020,93.498)
C4: (-36.334,64.969,93.271)
P: (-40.768,68.976,92.861)
C4': (-39.665,65.736,90.864)
C2': (-38.757,63.698,91.672)
O2': (-38.506,62.320,91.495)
N1: (-35.497,65.497,95.712)
N2: (-37.644,65.649,96.456)
N3: (-37.297,65.178,94.185)
N7: (-34.254,64.779,92.351)
N9: (-36.466,64.681,91.927)
O5': (-40.081,67.939,91.845)
O3': (-39.972,63.714,89.591)
C2: (-34.229,70.051,88.712)
OP1: (-35.463,62.792,85.908)
OP2: (-36.620,63.994,87.808)
C4: (-35.934,69.324,90.144)
O5': (-34.692,65.067,86.631)
C3': (-32.275,66.755,86.911)
C1': (-33.506,68.739,86.770)
O4': (-34.103,67.784,85.918)
C5': (-33.960,65.429,85.479)
P: (-35.904,64.052,86.529)
O2: (-33.376,70.846,88.319)
C4': (-33.185,66.697,85.691)
C2': (-32.099,68.246,87.088)
O2': (-31.216,68.749,86.091)
N1: (-34.342,68.882,87.970)
N3: (-35.034,70.261,89.798)
N4: (-36.685,69.502,91.232)
C6: (-35.275,67.944,88.314)
C5: (-36.085,68.120,89.381)
O3': (-31.051,66.080,86.734)
OP1: (-35.463,62.792,85.908)
OP2: (-36.620,63.994,87.808)
C4: (-35.934,69.324,90.144)
O5': (-34.692,65.067,86.631)
C3': (-32.275,66.755,86.911)
C1': (-33.506,68.739,86.770)
O4': (-34.103,67.784,85.918)
C5': (-33.960,65.429,85.479)
P: (-35.904,64.052,86.529)
O2: (-33.376,70.846,88.319)
C4': (-33.185,66.697,85.691)
C2': (-32.099,68.246,87.088)
O2': (-31.216,68.749,86.091)
N1: (-34.342,68.882,87.970)
N3: (-35.034,70.261,89.798)
N4: (-36.685,69.502,91.232)
C6: (-35.275,67.944,88.314)
C5: (-36.085,68.120,89.381)
O3': (-31.051,66.080,86.734)
Image (generated by PyMOL):