Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1280:187
Extra
PDB:
ATOM 1 O3' G A 279 41.713 -44.569 102.658 1.00 40.14 O
ATOM 2 P G A 280 40.336 -45.391 102.850 1.00 42.49 P
ATOM 3 OP1 G A 280 39.288 -44.407 102.905 1.00 42.27 O
ATOM 4 OP2 G A 280 40.496 -46.280 103.989 1.00 42.95 O
ATOM 5 O5' G A 280 40.220 -46.238 101.507 1.00 42.38 O
ATOM 6 C5' G A 280 39.587 -47.516 101.508 1.00 42.66 C
ATOM 7 C4' G A 280 39.487 -48.130 100.123 1.00 42.51 C
ATOM 8 O4' G A 280 40.743 -48.037 99.424 1.00 42.38 O
ATOM 9 C3' G A 280 39.100 -49.587 100.115 1.00 42.84 C
ATOM 10 O3' G A 280 37.760 -49.741 99.770 1.00 42.78 O
ATOM 11 C2' G A 280 40.028 -50.270 99.133 1.00 42.84 C
ATOM 12 O2' G A 280 39.373 -50.424 97.888 1.00 42.62 O
ATOM 13 C1' G A 280 41.176 -49.291 98.979 1.00 42.60 C
ATOM 14 N9 G A 280 42.332 -49.611 99.802 1.00 42.89 N
ATOM 15 C8 G A 280 43.560 -49.067 99.502 1.00 42.75 C
ATOM 16 N7 G A 280 44.457 -49.292 100.408 1.00 43.03 N
ATOM 17 C5 G A 280 43.749 -49.958 101.392 1.00 43.37 C
ATOM 18 C6 G A 280 44.203 -50.432 102.633 1.00 43.78 C
ATOM 19 O6 G A 280 45.356 -50.339 103.067 1.00 43.91 O
ATOM 20 N1 G A 280 43.195 -51.073 103.374 1.00 44.05 N
ATOM 21 C2 G A 280 41.889 -51.196 102.953 1.00 43.94 C
ATOM 22 N2 G A 280 41.042 -51.834 103.796 1.00 44.26 N
ATOM 23 N3 G A 280 41.447 -50.728 101.783 1.00 43.55 N
ATOM 24 C4 G A 280 42.423 -50.146 101.057 1.00 43.28 C
ATOM 25 P A A 281 36.950 -51.019 100.231 1.00 46.28 P
ATOM 26 OP1 A A 281 37.796 -52.204 99.989 1.00 46.55 O
ATOM 27 OP2 A A 281 35.614 -50.934 99.557 1.00 46.11 O
ATOM 28 O5' A A 281 36.771 -50.763 101.776 1.00 46.53 O
TER
ATOM 1 O3' A B 86 44.733 -48.768 96.161 1.00 37.85 O
ATOM 2 P C B 87 43.520 -48.296 95.200 1.00 40.62 P
ATOM 3 OP1 C B 87 42.330 -49.054 95.618 1.00 40.84 O
ATOM 4 OP2 C B 87 43.984 -48.419 93.787 1.00 40.43 O
ATOM 5 O5' C B 87 43.326 -46.762 95.537 1.00 40.32 O
ATOM 6 C5' C B 87 42.960 -46.316 96.830 1.00 40.44 C
ATOM 7 C4' C B 87 42.924 -44.794 96.879 1.00 40.11 C
ATOM 8 O4' C B 87 44.247 -44.268 96.591 1.00 40.00 O
ATOM 9 C3' C B 87 42.047 -44.131 95.846 1.00 39.75 C
ATOM 10 O3' C B 87 40.697 -44.082 96.237 1.00 39.77 O
ATOM 11 C2' C B 87 42.695 -42.761 95.666 1.00 39.45 C
ATOM 12 O2' C B 87 42.315 -41.898 96.693 1.00 39.45 O
ATOM 13 C1' C B 87 44.155 -43.066 95.863 1.00 39.61 C
ATOM 14 N1 C B 87 44.869 -43.207 94.603 1.00 39.44 N
ATOM 15 C2 C B 87 45.140 -42.068 93.849 1.00 39.09 C
ATOM 16 O2 C B 87 44.765 -40.985 94.279 1.00 38.93 O
ATOM 17 N3 C B 87 45.807 -42.152 92.669 1.00 38.94 N
ATOM 18 C4 C B 87 46.208 -43.350 92.299 1.00 39.15 C
ATOM 19 N4 C B 87 46.859 -43.468 91.175 1.00 39.03 N
ATOM 20 C5 C B 87 45.949 -44.515 93.059 1.00 39.51 C
ATOM 21 C6 C B 87 45.284 -44.418 94.207 1.00 39.65 C
ATOM 22 P G B 88 39.503 -44.147 95.147 1.00 35.44 P
ATOM 23 OP1 G B 88 38.298 -43.650 95.831 1.00 35.43 O
ATOM 24 OP2 G B 88 39.492 -45.518 94.561 1.00 35.63 O
ATOM 25 O5' G B 88 39.929 -43.101 94.049 1.00 35.04 O
TER
ATOM 2 P G A 280 40.336 -45.391 102.850 1.00 42.49 P
ATOM 3 OP1 G A 280 39.288 -44.407 102.905 1.00 42.27 O
ATOM 4 OP2 G A 280 40.496 -46.280 103.989 1.00 42.95 O
ATOM 5 O5' G A 280 40.220 -46.238 101.507 1.00 42.38 O
ATOM 6 C5' G A 280 39.587 -47.516 101.508 1.00 42.66 C
ATOM 7 C4' G A 280 39.487 -48.130 100.123 1.00 42.51 C
ATOM 8 O4' G A 280 40.743 -48.037 99.424 1.00 42.38 O
ATOM 9 C3' G A 280 39.100 -49.587 100.115 1.00 42.84 C
ATOM 10 O3' G A 280 37.760 -49.741 99.770 1.00 42.78 O
ATOM 11 C2' G A 280 40.028 -50.270 99.133 1.00 42.84 C
ATOM 12 O2' G A 280 39.373 -50.424 97.888 1.00 42.62 O
ATOM 13 C1' G A 280 41.176 -49.291 98.979 1.00 42.60 C
ATOM 14 N9 G A 280 42.332 -49.611 99.802 1.00 42.89 N
ATOM 15 C8 G A 280 43.560 -49.067 99.502 1.00 42.75 C
ATOM 16 N7 G A 280 44.457 -49.292 100.408 1.00 43.03 N
ATOM 17 C5 G A 280 43.749 -49.958 101.392 1.00 43.37 C
ATOM 18 C6 G A 280 44.203 -50.432 102.633 1.00 43.78 C
ATOM 19 O6 G A 280 45.356 -50.339 103.067 1.00 43.91 O
ATOM 20 N1 G A 280 43.195 -51.073 103.374 1.00 44.05 N
ATOM 21 C2 G A 280 41.889 -51.196 102.953 1.00 43.94 C
ATOM 22 N2 G A 280 41.042 -51.834 103.796 1.00 44.26 N
ATOM 23 N3 G A 280 41.447 -50.728 101.783 1.00 43.55 N
ATOM 24 C4 G A 280 42.423 -50.146 101.057 1.00 43.28 C
ATOM 25 P A A 281 36.950 -51.019 100.231 1.00 46.28 P
ATOM 26 OP1 A A 281 37.796 -52.204 99.989 1.00 46.55 O
ATOM 27 OP2 A A 281 35.614 -50.934 99.557 1.00 46.11 O
ATOM 28 O5' A A 281 36.771 -50.763 101.776 1.00 46.53 O
TER
ATOM 1 O3' A B 86 44.733 -48.768 96.161 1.00 37.85 O
ATOM 2 P C B 87 43.520 -48.296 95.200 1.00 40.62 P
ATOM 3 OP1 C B 87 42.330 -49.054 95.618 1.00 40.84 O
ATOM 4 OP2 C B 87 43.984 -48.419 93.787 1.00 40.43 O
ATOM 5 O5' C B 87 43.326 -46.762 95.537 1.00 40.32 O
ATOM 6 C5' C B 87 42.960 -46.316 96.830 1.00 40.44 C
ATOM 7 C4' C B 87 42.924 -44.794 96.879 1.00 40.11 C
ATOM 8 O4' C B 87 44.247 -44.268 96.591 1.00 40.00 O
ATOM 9 C3' C B 87 42.047 -44.131 95.846 1.00 39.75 C
ATOM 10 O3' C B 87 40.697 -44.082 96.237 1.00 39.77 O
ATOM 11 C2' C B 87 42.695 -42.761 95.666 1.00 39.45 C
ATOM 12 O2' C B 87 42.315 -41.898 96.693 1.00 39.45 O
ATOM 13 C1' C B 87 44.155 -43.066 95.863 1.00 39.61 C
ATOM 14 N1 C B 87 44.869 -43.207 94.603 1.00 39.44 N
ATOM 15 C2 C B 87 45.140 -42.068 93.849 1.00 39.09 C
ATOM 16 O2 C B 87 44.765 -40.985 94.279 1.00 38.93 O
ATOM 17 N3 C B 87 45.807 -42.152 92.669 1.00 38.94 N
ATOM 18 C4 C B 87 46.208 -43.350 92.299 1.00 39.15 C
ATOM 19 N4 C B 87 46.859 -43.468 91.175 1.00 39.03 N
ATOM 20 C5 C B 87 45.949 -44.515 93.059 1.00 39.51 C
ATOM 21 C6 C B 87 45.284 -44.418 94.207 1.00 39.65 C
ATOM 22 P G B 88 39.503 -44.147 95.147 1.00 35.44 P
ATOM 23 OP1 G B 88 38.298 -43.650 95.831 1.00 35.43 O
ATOM 24 OP2 G B 88 39.492 -45.518 94.561 1.00 35.63 O
ATOM 25 O5' G B 88 39.929 -43.101 94.049 1.00 35.04 O
TER
Atoms:
OP1: (39.288,-44.407,102.905)
OP2: (40.496,-46.280,103.989)
C3': (39.100,-49.587,100.115)
C1': (41.176,-49.291,98.979)
C5': (39.587,-47.516,101.508)
O6: (45.356,-50.339,103.067)
O4': (40.743,-48.037,99.424)
C8: (43.560,-49.067,99.502)
C2: (41.889,-51.196,102.953)
C6: (44.203,-50.432,102.633)
C5: (43.749,-49.958,101.392)
C4: (42.423,-50.146,101.057)
P: (40.336,-45.391,102.850)
C4': (39.487,-48.130,100.123)
C2': (40.028,-50.270,99.133)
O2': (39.373,-50.424,97.888)
N1: (43.195,-51.073,103.374)
N2: (41.042,-51.834,103.796)
N3: (41.447,-50.728,101.783)
N7: (44.457,-49.292,100.408)
N9: (42.332,-49.611,99.802)
O5': (40.220,-46.238,101.507)
O3': (37.760,-49.741,99.770)
OP2: (40.496,-46.280,103.989)
C3': (39.100,-49.587,100.115)
C1': (41.176,-49.291,98.979)
C5': (39.587,-47.516,101.508)
O6: (45.356,-50.339,103.067)
O4': (40.743,-48.037,99.424)
C8: (43.560,-49.067,99.502)
C2: (41.889,-51.196,102.953)
C6: (44.203,-50.432,102.633)
C5: (43.749,-49.958,101.392)
C4: (42.423,-50.146,101.057)
P: (40.336,-45.391,102.850)
C4': (39.487,-48.130,100.123)
C2': (40.028,-50.270,99.133)
O2': (39.373,-50.424,97.888)
N1: (43.195,-51.073,103.374)
N2: (41.042,-51.834,103.796)
N3: (41.447,-50.728,101.783)
N7: (44.457,-49.292,100.408)
N9: (42.332,-49.611,99.802)
O5': (40.220,-46.238,101.507)
O3': (37.760,-49.741,99.770)
C2: (45.140,-42.068,93.849)
OP1: (42.330,-49.054,95.618)
OP2: (43.984,-48.419,93.787)
C4: (46.208,-43.350,92.299)
O5': (43.326,-46.762,95.537)
C3': (42.047,-44.131,95.846)
C1': (44.155,-43.066,95.863)
O4': (44.247,-44.268,96.591)
C5': (42.960,-46.316,96.830)
P: (43.520,-48.296,95.200)
O2: (44.765,-40.985,94.279)
C4': (42.924,-44.794,96.879)
C2': (42.695,-42.761,95.666)
O2': (42.315,-41.898,96.693)
N1: (44.869,-43.207,94.603)
N3: (45.807,-42.152,92.669)
N4: (46.859,-43.468,91.175)
C6: (45.284,-44.418,94.207)
C5: (45.949,-44.515,93.059)
O3': (40.697,-44.082,96.237)
OP1: (42.330,-49.054,95.618)
OP2: (43.984,-48.419,93.787)
C4: (46.208,-43.350,92.299)
O5': (43.326,-46.762,95.537)
C3': (42.047,-44.131,95.846)
C1': (44.155,-43.066,95.863)
O4': (44.247,-44.268,96.591)
C5': (42.960,-46.316,96.830)
P: (43.520,-48.296,95.200)
O2: (44.765,-40.985,94.279)
C4': (42.924,-44.794,96.879)
C2': (42.695,-42.761,95.666)
O2': (42.315,-41.898,96.693)
N1: (44.869,-43.207,94.603)
N3: (45.807,-42.152,92.669)
N4: (46.859,-43.468,91.175)
C6: (45.284,-44.418,94.207)
C5: (45.949,-44.515,93.059)
O3': (40.697,-44.082,96.237)
Image (generated by PyMOL):