Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02418:02395
Extra
PDB:
ATOM 1 O3' A A2417 53.667 122.396 140.209 1.00 50.91 O
ATOM 2 P A A2418 53.736 122.396 138.597 1.00 51.18 P
ATOM 3 OP1 A A2418 52.583 123.180 138.090 1.00 50.27 O
ATOM 4 OP2 A A2418 53.934 121.007 138.135 1.00 50.17 O
ATOM 5 O5' A A2418 55.058 123.218 138.265 1.00 49.32 O
ATOM 6 C5' A A2418 55.245 124.546 138.792 1.00 48.87 C
ATOM 7 C4' A A2418 55.743 125.471 137.709 1.00 48.42 C
ATOM 8 O4' A A2418 57.076 125.057 137.318 1.00 48.23 O
ATOM 9 C3' A A2418 54.914 125.486 136.430 1.00 48.63 C
ATOM 10 O3' A A2418 54.966 126.789 135.841 1.00 49.09 O
ATOM 11 C2' A A2418 55.619 124.438 135.573 1.00 47.75 C
ATOM 12 O2' A A2418 55.425 124.627 134.187 1.00 50.61 O
ATOM 13 C1' A A2418 57.083 124.656 135.961 1.00 45.83 C
ATOM 14 N9 A A2418 57.930 123.464 135.864 1.00 41.90 N
ATOM 15 C8 A A2418 57.542 122.154 135.761 1.00 41.37 C
ATOM 16 N7 A A2418 58.538 121.308 135.712 1.00 40.60 N
ATOM 17 C5 A A2418 59.663 122.112 135.779 1.00 41.30 C
ATOM 18 C6 A A2418 61.038 121.815 135.753 1.00 41.40 C
ATOM 19 N6 A A2418 61.523 120.582 135.632 1.00 41.40 N
ATOM 20 N1 A A2418 61.906 122.844 135.845 1.00 40.76 N
ATOM 21 C2 A A2418 61.415 124.087 135.938 1.00 41.46 C
ATOM 22 N3 A A2418 60.144 124.496 135.957 1.00 43.19 N
ATOM 23 C4 A A2418 59.306 123.444 135.874 1.00 42.64 C
ATOM 24 P G A2419 53.608 127.493 135.325 1.00 50.72 P
ATOM 25 OP1 G A2419 52.427 126.829 135.937 1.00 50.36 O
ATOM 26 OP2 G A2419 53.705 127.594 133.844 1.00 52.54 O
ATOM 27 O5' G A2419 53.679 128.966 135.924 1.00 50.88 O
TER
ATOM 1 O3' A B2394 63.007 115.278 135.869 1.00 43.65 O
ATOM 2 P U B2395 63.017 115.934 137.330 1.00 46.47 P
ATOM 3 OP1 U B2395 64.314 115.566 137.931 1.00 46.20 O
ATOM 4 OP2 U B2395 61.766 115.570 138.028 1.00 47.73 O
ATOM 5 O5' U B2395 63.019 117.498 137.042 1.00 44.57 O
ATOM 6 C5' U B2395 64.051 118.091 136.234 1.00 44.52 C
ATOM 7 C4' U B2395 64.767 119.164 137.013 1.00 44.49 C
ATOM 8 O4' U B2395 63.896 120.309 137.207 1.00 44.99 O
ATOM 9 C3' U B2395 65.225 118.761 138.403 1.00 45.30 C
ATOM 10 O3' U B2395 66.335 119.561 138.721 1.00 48.00 O
ATOM 11 C2' U B2395 64.062 119.202 139.275 1.00 44.11 C
ATOM 12 O2' U B2395 64.470 119.429 140.607 1.00 44.16 O
ATOM 13 C1' U B2395 63.659 120.508 138.585 1.00 42.41 C
ATOM 14 N1 U B2395 62.241 120.865 138.738 1.00 41.29 N
ATOM 15 C2 U B2395 61.924 122.175 139.058 1.00 40.20 C
ATOM 16 O2 U B2395 62.760 123.051 139.218 1.00 39.54 O
ATOM 17 N3 U B2395 60.584 122.423 139.182 1.00 39.17 N
ATOM 18 C4 U B2395 59.557 121.521 139.022 1.00 39.51 C
ATOM 19 O4 U B2395 58.410 121.869 139.270 1.00 41.66 O
ATOM 20 C5 U B2395 59.963 120.201 138.681 1.00 39.82 C
ATOM 21 C6 U B2395 61.254 119.922 138.559 1.00 40.77 C
ATOM 22 P C B2396 67.738 118.880 139.015 1.00 49.08 P
ATOM 23 OP1 C B2396 68.252 118.295 137.756 1.00 50.52 O
ATOM 24 OP2 C B2396 67.496 118.007 140.182 1.00 49.52 O
ATOM 25 O5' C B2396 68.629 120.131 139.420 1.00 47.46 O
TER
ATOM 2 P A A2418 53.736 122.396 138.597 1.00 51.18 P
ATOM 3 OP1 A A2418 52.583 123.180 138.090 1.00 50.27 O
ATOM 4 OP2 A A2418 53.934 121.007 138.135 1.00 50.17 O
ATOM 5 O5' A A2418 55.058 123.218 138.265 1.00 49.32 O
ATOM 6 C5' A A2418 55.245 124.546 138.792 1.00 48.87 C
ATOM 7 C4' A A2418 55.743 125.471 137.709 1.00 48.42 C
ATOM 8 O4' A A2418 57.076 125.057 137.318 1.00 48.23 O
ATOM 9 C3' A A2418 54.914 125.486 136.430 1.00 48.63 C
ATOM 10 O3' A A2418 54.966 126.789 135.841 1.00 49.09 O
ATOM 11 C2' A A2418 55.619 124.438 135.573 1.00 47.75 C
ATOM 12 O2' A A2418 55.425 124.627 134.187 1.00 50.61 O
ATOM 13 C1' A A2418 57.083 124.656 135.961 1.00 45.83 C
ATOM 14 N9 A A2418 57.930 123.464 135.864 1.00 41.90 N
ATOM 15 C8 A A2418 57.542 122.154 135.761 1.00 41.37 C
ATOM 16 N7 A A2418 58.538 121.308 135.712 1.00 40.60 N
ATOM 17 C5 A A2418 59.663 122.112 135.779 1.00 41.30 C
ATOM 18 C6 A A2418 61.038 121.815 135.753 1.00 41.40 C
ATOM 19 N6 A A2418 61.523 120.582 135.632 1.00 41.40 N
ATOM 20 N1 A A2418 61.906 122.844 135.845 1.00 40.76 N
ATOM 21 C2 A A2418 61.415 124.087 135.938 1.00 41.46 C
ATOM 22 N3 A A2418 60.144 124.496 135.957 1.00 43.19 N
ATOM 23 C4 A A2418 59.306 123.444 135.874 1.00 42.64 C
ATOM 24 P G A2419 53.608 127.493 135.325 1.00 50.72 P
ATOM 25 OP1 G A2419 52.427 126.829 135.937 1.00 50.36 O
ATOM 26 OP2 G A2419 53.705 127.594 133.844 1.00 52.54 O
ATOM 27 O5' G A2419 53.679 128.966 135.924 1.00 50.88 O
TER
ATOM 1 O3' A B2394 63.007 115.278 135.869 1.00 43.65 O
ATOM 2 P U B2395 63.017 115.934 137.330 1.00 46.47 P
ATOM 3 OP1 U B2395 64.314 115.566 137.931 1.00 46.20 O
ATOM 4 OP2 U B2395 61.766 115.570 138.028 1.00 47.73 O
ATOM 5 O5' U B2395 63.019 117.498 137.042 1.00 44.57 O
ATOM 6 C5' U B2395 64.051 118.091 136.234 1.00 44.52 C
ATOM 7 C4' U B2395 64.767 119.164 137.013 1.00 44.49 C
ATOM 8 O4' U B2395 63.896 120.309 137.207 1.00 44.99 O
ATOM 9 C3' U B2395 65.225 118.761 138.403 1.00 45.30 C
ATOM 10 O3' U B2395 66.335 119.561 138.721 1.00 48.00 O
ATOM 11 C2' U B2395 64.062 119.202 139.275 1.00 44.11 C
ATOM 12 O2' U B2395 64.470 119.429 140.607 1.00 44.16 O
ATOM 13 C1' U B2395 63.659 120.508 138.585 1.00 42.41 C
ATOM 14 N1 U B2395 62.241 120.865 138.738 1.00 41.29 N
ATOM 15 C2 U B2395 61.924 122.175 139.058 1.00 40.20 C
ATOM 16 O2 U B2395 62.760 123.051 139.218 1.00 39.54 O
ATOM 17 N3 U B2395 60.584 122.423 139.182 1.00 39.17 N
ATOM 18 C4 U B2395 59.557 121.521 139.022 1.00 39.51 C
ATOM 19 O4 U B2395 58.410 121.869 139.270 1.00 41.66 O
ATOM 20 C5 U B2395 59.963 120.201 138.681 1.00 39.82 C
ATOM 21 C6 U B2395 61.254 119.922 138.559 1.00 40.77 C
ATOM 22 P C B2396 67.738 118.880 139.015 1.00 49.08 P
ATOM 23 OP1 C B2396 68.252 118.295 137.756 1.00 50.52 O
ATOM 24 OP2 C B2396 67.496 118.007 140.182 1.00 49.52 O
ATOM 25 O5' C B2396 68.629 120.131 139.420 1.00 47.46 O
TER
Atoms:
OP1: (52.583,123.180,138.090)
OP2: (53.934,121.007,138.135)
C3': (54.914,125.486,136.430)
C1': (57.083,124.656,135.961)
C5': (55.245,124.546,138.792)
O4': (57.076,125.057,137.318)
C8: (57.542,122.154,135.761)
O2': (55.425,124.627,134.187)
C6: (61.038,121.815,135.753)
C5: (59.663,122.112,135.779)
C4: (59.306,123.444,135.874)
P: (53.736,122.396,138.597)
C4': (55.743,125.471,137.709)
C2': (55.619,124.438,135.573)
C2: (61.415,124.087,135.938)
N1: (61.906,122.844,135.845)
N3: (60.144,124.496,135.957)
N6: (61.523,120.582,135.632)
N7: (58.538,121.308,135.712)
N9: (57.930,123.464,135.864)
O5': (55.058,123.218,138.265)
O3': (54.966,126.789,135.841)
OP2: (53.934,121.007,138.135)
C3': (54.914,125.486,136.430)
C1': (57.083,124.656,135.961)
C5': (55.245,124.546,138.792)
O4': (57.076,125.057,137.318)
C8: (57.542,122.154,135.761)
O2': (55.425,124.627,134.187)
C6: (61.038,121.815,135.753)
C5: (59.663,122.112,135.779)
C4: (59.306,123.444,135.874)
P: (53.736,122.396,138.597)
C4': (55.743,125.471,137.709)
C2': (55.619,124.438,135.573)
C2: (61.415,124.087,135.938)
N1: (61.906,122.844,135.845)
N3: (60.144,124.496,135.957)
N6: (61.523,120.582,135.632)
N7: (58.538,121.308,135.712)
N9: (57.930,123.464,135.864)
O5': (55.058,123.218,138.265)
O3': (54.966,126.789,135.841)
C4: (59.557,121.521,139.022)
N3: (60.584,122.423,139.182)
OP1: (64.314,115.566,137.931)
OP2: (61.766,115.570,138.028)
C2: (61.924,122.175,139.058)
C1': (63.659,120.508,138.585)
C3': (65.225,118.761,138.403)
O5': (63.019,117.498,137.042)
O4': (63.896,120.309,137.207)
C5': (64.051,118.091,136.234)
P: (63.017,115.934,137.330)
C4': (64.767,119.164,137.013)
C2': (64.062,119.202,139.275)
O2': (64.470,119.429,140.607)
N1: (62.241,120.865,138.738)
O4: (58.410,121.869,139.270)
O2: (62.760,123.051,139.218)
C6: (61.254,119.922,138.559)
C5: (59.963,120.201,138.681)
O3': (66.335,119.561,138.721)
N3: (60.584,122.423,139.182)
OP1: (64.314,115.566,137.931)
OP2: (61.766,115.570,138.028)
C2: (61.924,122.175,139.058)
C1': (63.659,120.508,138.585)
C3': (65.225,118.761,138.403)
O5': (63.019,117.498,137.042)
O4': (63.896,120.309,137.207)
C5': (64.051,118.091,136.234)
P: (63.017,115.934,137.330)
C4': (64.767,119.164,137.013)
C2': (64.062,119.202,139.275)
O2': (64.470,119.429,140.607)
N1: (62.241,120.865,138.738)
O4: (58.410,121.869,139.270)
O2: (62.760,123.051,139.218)
C6: (61.254,119.922,138.559)
C5: (59.963,120.201,138.681)
O3': (66.335,119.561,138.721)
Image (generated by PyMOL):