Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2419:A2519
Extra
PDB:
ATOM 1 O3' A A2418 54.879 126.693 135.705 1.00 46.33 O
ATOM 2 P G A2419 53.471 127.425 135.340 1.00 48.55 P
ATOM 3 OP1 G A2419 52.302 126.772 136.013 1.00 46.73 O
ATOM 4 OP2 G A2419 53.457 127.578 133.868 1.00 48.54 O
ATOM 5 O5' G A2419 53.603 128.882 135.978 1.00 46.10 O
ATOM 6 C5' G A2419 53.551 129.055 137.402 1.00 44.46 C
ATOM 7 C4' G A2419 53.932 130.464 137.793 1.00 42.56 C
ATOM 8 O4' G A2419 54.100 130.478 139.238 1.00 43.62 O
ATOM 9 C3' G A2419 55.257 130.969 137.243 1.00 41.46 C
ATOM 10 O3' G A2419 55.084 131.637 136.012 1.00 39.78 O
ATOM 11 C2' G A2419 55.790 131.840 138.375 1.00 43.00 C
ATOM 12 O2' G A2419 55.236 133.142 138.487 1.00 44.17 O
ATOM 13 C1' G A2419 55.377 130.991 139.570 1.00 43.52 C
ATOM 14 N9 G A2419 56.309 129.876 139.726 1.00 42.60 N
ATOM 15 C8 G A2419 56.207 128.606 139.213 1.00 42.02 C
ATOM 16 N7 G A2419 57.225 127.852 139.515 1.00 41.63 N
ATOM 17 C5 G A2419 58.039 128.671 140.281 1.00 42.26 C
ATOM 18 C6 G A2419 59.280 128.409 140.899 1.00 42.43 C
ATOM 19 O6 G A2419 59.930 127.360 140.909 1.00 42.89 O
ATOM 20 N1 G A2419 59.767 129.529 141.560 1.00 42.54 N
ATOM 21 C2 G A2419 59.139 130.743 141.627 1.00 43.64 C
ATOM 22 N2 G A2419 59.776 131.714 142.320 1.00 44.70 N
ATOM 23 N3 G A2419 57.977 130.995 141.061 1.00 44.06 N
ATOM 24 C4 G A2419 57.489 129.921 140.412 1.00 42.29 C
ATOM 25 P G A2420 56.330 131.805 135.018 1.00 38.08 P
ATOM 26 OP1 G A2420 55.905 132.814 134.048 1.00 36.42 O
ATOM 27 OP2 G A2420 56.816 130.479 134.536 1.00 36.75 O
ATOM 28 O5' G A2420 57.438 132.508 135.907 1.00 38.21 O
TER
ATOM 1 O3' G B2518 51.975 137.354 134.038 1.00 40.18 O
ATOM 2 P A B2519 52.151 135.767 134.102 1.00 39.32 P
ATOM 3 OP1 A B2519 52.575 135.371 132.749 1.00 41.01 O
ATOM 4 OP2 A B2519 50.972 135.121 134.712 1.00 37.45 O
ATOM 5 O5' A B2519 53.378 135.568 135.089 1.00 41.33 O
ATOM 6 C5' A B2519 53.164 135.009 136.398 1.00 41.64 C
ATOM 7 C4' A B2519 53.459 136.038 137.450 1.00 42.25 C
ATOM 8 O4' A B2519 54.889 136.232 137.507 1.00 40.59 O
ATOM 9 C3' A B2519 52.849 137.412 137.189 1.00 41.93 C
ATOM 10 O3' A B2519 52.548 138.038 138.414 1.00 41.69 O
ATOM 11 C2' A B2519 53.979 138.142 136.494 1.00 41.14 C
ATOM 12 O2' A B2519 53.910 139.542 136.620 1.00 42.20 O
ATOM 13 C1' A B2519 55.175 137.584 137.257 1.00 40.06 C
ATOM 14 N9 A B2519 56.425 137.651 136.527 1.00 37.50 N
ATOM 15 C8 A B2519 56.655 137.495 135.189 1.00 38.78 C
ATOM 16 N7 A B2519 57.899 137.695 134.847 1.00 37.77 N
ATOM 17 C5 A B2519 58.528 137.988 136.047 1.00 37.10 C
ATOM 18 C6 A B2519 59.851 138.322 136.367 1.00 37.77 C
ATOM 19 N6 A B2519 60.822 138.463 135.464 1.00 37.45 N
ATOM 20 N1 A B2519 60.147 138.527 137.669 1.00 37.87 N
ATOM 21 C2 A B2519 59.167 138.429 138.570 1.00 35.59 C
ATOM 22 N3 A B2519 57.887 138.150 138.385 1.00 35.60 N
ATOM 23 C4 A B2519 57.634 137.935 137.087 1.00 36.23 C
ATOM 24 P A B2520 51.048 138.019 138.927 1.00 43.76 P
ATOM 25 OP1 A B2520 50.878 136.791 139.721 1.00 45.50 O
ATOM 26 OP2 A B2520 50.190 138.248 137.753 1.00 46.63 O
ATOM 27 O5' A B2520 50.943 139.256 139.910 1.00 45.39 O
TER
ATOM 2 P G A2419 53.471 127.425 135.340 1.00 48.55 P
ATOM 3 OP1 G A2419 52.302 126.772 136.013 1.00 46.73 O
ATOM 4 OP2 G A2419 53.457 127.578 133.868 1.00 48.54 O
ATOM 5 O5' G A2419 53.603 128.882 135.978 1.00 46.10 O
ATOM 6 C5' G A2419 53.551 129.055 137.402 1.00 44.46 C
ATOM 7 C4' G A2419 53.932 130.464 137.793 1.00 42.56 C
ATOM 8 O4' G A2419 54.100 130.478 139.238 1.00 43.62 O
ATOM 9 C3' G A2419 55.257 130.969 137.243 1.00 41.46 C
ATOM 10 O3' G A2419 55.084 131.637 136.012 1.00 39.78 O
ATOM 11 C2' G A2419 55.790 131.840 138.375 1.00 43.00 C
ATOM 12 O2' G A2419 55.236 133.142 138.487 1.00 44.17 O
ATOM 13 C1' G A2419 55.377 130.991 139.570 1.00 43.52 C
ATOM 14 N9 G A2419 56.309 129.876 139.726 1.00 42.60 N
ATOM 15 C8 G A2419 56.207 128.606 139.213 1.00 42.02 C
ATOM 16 N7 G A2419 57.225 127.852 139.515 1.00 41.63 N
ATOM 17 C5 G A2419 58.039 128.671 140.281 1.00 42.26 C
ATOM 18 C6 G A2419 59.280 128.409 140.899 1.00 42.43 C
ATOM 19 O6 G A2419 59.930 127.360 140.909 1.00 42.89 O
ATOM 20 N1 G A2419 59.767 129.529 141.560 1.00 42.54 N
ATOM 21 C2 G A2419 59.139 130.743 141.627 1.00 43.64 C
ATOM 22 N2 G A2419 59.776 131.714 142.320 1.00 44.70 N
ATOM 23 N3 G A2419 57.977 130.995 141.061 1.00 44.06 N
ATOM 24 C4 G A2419 57.489 129.921 140.412 1.00 42.29 C
ATOM 25 P G A2420 56.330 131.805 135.018 1.00 38.08 P
ATOM 26 OP1 G A2420 55.905 132.814 134.048 1.00 36.42 O
ATOM 27 OP2 G A2420 56.816 130.479 134.536 1.00 36.75 O
ATOM 28 O5' G A2420 57.438 132.508 135.907 1.00 38.21 O
TER
ATOM 1 O3' G B2518 51.975 137.354 134.038 1.00 40.18 O
ATOM 2 P A B2519 52.151 135.767 134.102 1.00 39.32 P
ATOM 3 OP1 A B2519 52.575 135.371 132.749 1.00 41.01 O
ATOM 4 OP2 A B2519 50.972 135.121 134.712 1.00 37.45 O
ATOM 5 O5' A B2519 53.378 135.568 135.089 1.00 41.33 O
ATOM 6 C5' A B2519 53.164 135.009 136.398 1.00 41.64 C
ATOM 7 C4' A B2519 53.459 136.038 137.450 1.00 42.25 C
ATOM 8 O4' A B2519 54.889 136.232 137.507 1.00 40.59 O
ATOM 9 C3' A B2519 52.849 137.412 137.189 1.00 41.93 C
ATOM 10 O3' A B2519 52.548 138.038 138.414 1.00 41.69 O
ATOM 11 C2' A B2519 53.979 138.142 136.494 1.00 41.14 C
ATOM 12 O2' A B2519 53.910 139.542 136.620 1.00 42.20 O
ATOM 13 C1' A B2519 55.175 137.584 137.257 1.00 40.06 C
ATOM 14 N9 A B2519 56.425 137.651 136.527 1.00 37.50 N
ATOM 15 C8 A B2519 56.655 137.495 135.189 1.00 38.78 C
ATOM 16 N7 A B2519 57.899 137.695 134.847 1.00 37.77 N
ATOM 17 C5 A B2519 58.528 137.988 136.047 1.00 37.10 C
ATOM 18 C6 A B2519 59.851 138.322 136.367 1.00 37.77 C
ATOM 19 N6 A B2519 60.822 138.463 135.464 1.00 37.45 N
ATOM 20 N1 A B2519 60.147 138.527 137.669 1.00 37.87 N
ATOM 21 C2 A B2519 59.167 138.429 138.570 1.00 35.59 C
ATOM 22 N3 A B2519 57.887 138.150 138.385 1.00 35.60 N
ATOM 23 C4 A B2519 57.634 137.935 137.087 1.00 36.23 C
ATOM 24 P A B2520 51.048 138.019 138.927 1.00 43.76 P
ATOM 25 OP1 A B2520 50.878 136.791 139.721 1.00 45.50 O
ATOM 26 OP2 A B2520 50.190 138.248 137.753 1.00 46.63 O
ATOM 27 O5' A B2520 50.943 139.256 139.910 1.00 45.39 O
TER
Atoms:
OP1: (52.302,126.772,136.013)
OP2: (53.457,127.578,133.868)
C3': (55.257,130.969,137.243)
C1': (55.377,130.991,139.570)
C5': (53.551,129.055,137.402)
O6: (59.930,127.360,140.909)
O4': (54.100,130.478,139.238)
C8: (56.207,128.606,139.213)
C2: (59.139,130.743,141.627)
C6: (59.280,128.409,140.899)
C5: (58.039,128.671,140.281)
C4: (57.489,129.921,140.412)
P: (53.471,127.425,135.340)
C4': (53.932,130.464,137.793)
C2': (55.790,131.840,138.375)
O2': (55.236,133.142,138.487)
N1: (59.767,129.529,141.560)
N2: (59.776,131.714,142.320)
N3: (57.977,130.995,141.061)
N7: (57.225,127.852,139.515)
N9: (56.309,129.876,139.726)
O5': (53.603,128.882,135.978)
O3': (55.084,131.637,136.012)
OP2: (53.457,127.578,133.868)
C3': (55.257,130.969,137.243)
C1': (55.377,130.991,139.570)
C5': (53.551,129.055,137.402)
O6: (59.930,127.360,140.909)
O4': (54.100,130.478,139.238)
C8: (56.207,128.606,139.213)
C2: (59.139,130.743,141.627)
C6: (59.280,128.409,140.899)
C5: (58.039,128.671,140.281)
C4: (57.489,129.921,140.412)
P: (53.471,127.425,135.340)
C4': (53.932,130.464,137.793)
C2': (55.790,131.840,138.375)
O2': (55.236,133.142,138.487)
N1: (59.767,129.529,141.560)
N2: (59.776,131.714,142.320)
N3: (57.977,130.995,141.061)
N7: (57.225,127.852,139.515)
N9: (56.309,129.876,139.726)
O5': (53.603,128.882,135.978)
O3': (55.084,131.637,136.012)
OP1: (52.575,135.371,132.749)
OP2: (50.972,135.121,134.712)
C3': (52.849,137.412,137.189)
C1': (55.175,137.584,137.257)
C5': (53.164,135.009,136.398)
O4': (54.889,136.232,137.507)
C8: (56.655,137.495,135.189)
O2': (53.910,139.542,136.620)
C6: (59.851,138.322,136.367)
C5: (58.528,137.988,136.047)
C4: (57.634,137.935,137.087)
P: (52.151,135.767,134.102)
C4': (53.459,136.038,137.450)
C2': (53.979,138.142,136.494)
C2: (59.167,138.429,138.570)
N1: (60.147,138.527,137.669)
N3: (57.887,138.150,138.385)
N6: (60.822,138.463,135.464)
N7: (57.899,137.695,134.847)
N9: (56.425,137.651,136.527)
O5': (53.378,135.568,135.089)
O3': (52.548,138.038,138.414)
OP2: (50.972,135.121,134.712)
C3': (52.849,137.412,137.189)
C1': (55.175,137.584,137.257)
C5': (53.164,135.009,136.398)
O4': (54.889,136.232,137.507)
C8: (56.655,137.495,135.189)
O2': (53.910,139.542,136.620)
C6: (59.851,138.322,136.367)
C5: (58.528,137.988,136.047)
C4: (57.634,137.935,137.087)
P: (52.151,135.767,134.102)
C4': (53.459,136.038,137.450)
C2': (53.979,138.142,136.494)
C2: (59.167,138.429,138.570)
N1: (60.147,138.527,137.669)
N3: (57.887,138.150,138.385)
N6: (60.822,138.463,135.464)
N7: (57.899,137.695,134.847)
N9: (56.425,137.651,136.527)
O5': (53.378,135.568,135.089)
O3': (52.548,138.038,138.414)
Image (generated by PyMOL):