ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A2419:A2519

Extra

PDB:
ATOM 1 O3' A A2418 54.715 126.262 135.219 1.00 33.69 O
ATOM 2 P G A2419 53.374 127.021 134.737 1.00 35.89 P
ATOM 3 OP1 G A2419 52.167 126.330 135.271 1.00 34.38 O
ATOM 4 OP2 G A2419 53.502 127.235 133.277 1.00 37.77 O
ATOM 5 O5' G A2419 53.473 128.454 135.424 1.00 34.52 O
ATOM 6 C5' G A2419 53.480 128.593 136.839 1.00 32.53 C
ATOM 7 C4' G A2419 53.804 130.015 137.230 1.00 31.84 C
ATOM 8 O4' G A2419 53.945 130.049 138.674 1.00 34.63 O
ATOM 9 C3' G A2419 55.107 130.584 136.681 1.00 32.51 C
ATOM 10 O3' G A2419 54.876 131.325 135.489 1.00 31.69 O
ATOM 11 C2' G A2419 55.616 131.443 137.833 1.00 34.28 C
ATOM 12 O2' G A2419 54.949 132.685 137.964 1.00 37.27 O
ATOM 13 C1' G A2419 55.210 130.579 139.022 1.00 34.84 C
ATOM 14 N9 G A2419 56.125 129.464 139.265 1.00 34.15 N
ATOM 15 C8 G A2419 55.984 128.160 138.855 1.00 32.72 C
ATOM 16 N7 G A2419 56.972 127.397 139.230 1.00 32.49 N
ATOM 17 C5 G A2419 57.819 128.248 139.926 1.00 33.07 C
ATOM 18 C6 G A2419 59.060 127.996 140.562 1.00 33.85 C
ATOM 19 O6 G A2419 59.695 126.937 140.631 1.00 33.19 O
ATOM 20 N1 G A2419 59.567 129.144 141.157 1.00 34.82 N
ATOM 21 C2 G A2419 58.969 130.380 141.137 1.00 35.74 C
ATOM 22 N2 G A2419 59.608 131.372 141.779 1.00 36.93 N
ATOM 23 N3 G A2419 57.823 130.629 140.534 1.00 35.48 N
ATOM 24 C4 G A2419 57.307 129.525 139.958 1.00 33.56 C
ATOM 25 P G A2420 56.041 131.457 134.381 1.00 33.66 P
ATOM 26 OP1 G A2420 55.530 132.412 133.373 1.00 33.17 O
ATOM 27 OP2 G A2420 56.481 130.101 133.948 1.00 35.78 O
ATOM 28 O5' G A2420 57.242 132.165 135.147 1.00 32.51 O
TER

ATOM 1 O3' G B2518 51.752 137.030 133.659 1.00 33.41 O
ATOM 2 P A B2519 51.900 135.434 133.628 1.00 33.44 P
ATOM 3 OP1 A B2519 52.335 135.094 132.257 1.00 35.06 O
ATOM 4 OP2 A B2519 50.685 134.793 134.183 1.00 31.13 O
ATOM 5 O5' A B2519 53.128 135.126 134.590 1.00 34.34 O
ATOM 6 C5' A B2519 52.919 134.578 135.907 1.00 35.11 C
ATOM 7 C4' A B2519 53.276 135.601 136.942 1.00 35.13 C
ATOM 8 O4' A B2519 54.713 135.828 136.925 1.00 35.06 O
ATOM 9 C3' A B2519 52.631 136.962 136.695 1.00 36.72 C
ATOM 10 O3' A B2519 52.361 137.606 137.933 1.00 39.11 O
ATOM 11 C2' A B2519 53.734 137.715 135.970 1.00 35.23 C
ATOM 12 O2' A B2519 53.616 139.117 136.072 1.00 35.57 O
ATOM 13 C1' A B2519 54.954 137.207 136.733 1.00 34.75 C
ATOM 14 N9 A B2519 56.219 137.356 136.032 1.00 34.03 N
ATOM 15 C8 A B2519 56.454 137.247 134.693 1.00 35.17 C
ATOM 16 N7 A B2519 57.707 137.431 134.364 1.00 36.23 N
ATOM 17 C5 A B2519 58.336 137.685 135.572 1.00 33.82 C
ATOM 18 C6 A B2519 59.663 137.967 135.897 1.00 33.66 C
ATOM 19 N6 A B2519 60.642 138.059 134.991 1.00 33.87 N
ATOM 20 N1 A B2519 59.962 138.159 137.201 1.00 34.10 N
ATOM 21 C2 A B2519 58.978 138.083 138.101 1.00 33.37 C
ATOM 22 N3 A B2519 57.688 137.836 137.912 1.00 33.55 N
ATOM 23 C4 A B2519 57.432 137.638 136.609 1.00 33.56 C
ATOM 24 P A B2520 50.863 137.648 138.468 1.00 40.28 P
ATOM 25 OP1 A B2520 50.686 136.424 139.265 1.00 43.30 O
ATOM 26 OP2 A B2520 49.948 137.919 137.330 1.00 45.09 O
ATOM 27 O5' A B2520 50.813 138.893 139.437 1.00 39.77 O
TER

Atoms:
OP1: (52.167,126.330,135.271)
OP2: (53.502,127.235,133.277)
C3': (55.107,130.584,136.681)
C1': (55.210,130.579,139.022)
C5': (53.480,128.593,136.839)
O6: (59.695,126.937,140.631)
O4': (53.945,130.049,138.674)
C8: (55.984,128.160,138.855)
C2: (58.969,130.380,141.137)
C6: (59.060,127.996,140.562)
C5: (57.819,128.248,139.926)
C4: (57.307,129.525,139.958)
P: (53.374,127.021,134.737)
C4': (53.804,130.015,137.230)
C2': (55.616,131.443,137.833)
O2': (54.949,132.685,137.964)
N1: (59.567,129.144,141.157)
N2: (59.608,131.372,141.779)
N3: (57.823,130.629,140.534)
N7: (56.972,127.397,139.230)
N9: (56.125,129.464,139.265)
O5': (53.473,128.454,135.424)
O3': (54.876,131.325,135.489)
OP1: (52.335,135.094,132.257)
OP2: (50.685,134.793,134.183)
C3': (52.631,136.962,136.695)
C1': (54.954,137.207,136.733)
C5': (52.919,134.578,135.907)
O4': (54.713,135.828,136.925)
C8: (56.454,137.247,134.693)
O2': (53.616,139.117,136.072)
C6: (59.663,137.967,135.897)
C5: (58.336,137.685,135.572)
C4: (57.432,137.638,136.609)
P: (51.900,135.434,133.628)
C4': (53.276,135.601,136.942)
C2': (53.734,137.715,135.970)
C2: (58.978,138.083,138.101)
N1: (59.962,138.159,137.201)
N3: (57.688,137.836,137.912)
N6: (60.642,138.059,134.991)
N7: (57.707,137.431,134.364)
N9: (56.219,137.356,136.032)
O5': (53.128,135.126,134.590)
O3': (52.361,137.606,137.933)
Image (generated by PyMOL):
PyMOL image
show in jmol