ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:02419:02519

Extra

PDB:
ATOM 1 O3' A A2418 54.824 125.210 135.682 1.00 41.47 O
ATOM 2 P G A2419 53.452 125.981 135.315 1.00 41.09 P
ATOM 3 OP1 G A2419 52.312 125.303 135.985 1.00 42.05 O
ATOM 4 OP2 G A2419 53.400 126.210 133.850 1.00 47.83 O
ATOM 5 O5' G A2419 53.620 127.428 135.950 1.00 42.95 O
ATOM 6 C5' G A2419 53.471 127.637 137.347 1.00 39.78 C
ATOM 7 C4' G A2419 53.822 129.063 137.713 1.00 39.33 C
ATOM 8 O4' G A2419 54.011 129.083 139.156 1.00 35.32 O
ATOM 9 C3' G A2419 55.125 129.613 137.133 1.00 37.97 C
ATOM 10 O3' G A2419 54.926 130.350 135.922 1.00 39.87 O
ATOM 11 C2' G A2419 55.658 130.480 138.264 1.00 36.82 C
ATOM 12 O2' G A2419 55.004 131.730 138.351 1.00 37.38 O
ATOM 13 C1' G A2419 55.273 129.627 139.471 1.00 35.95 C
ATOM 14 N9 G A2419 56.200 128.523 139.702 1.00 33.50 N
ATOM 15 C8 G A2419 56.081 127.233 139.252 1.00 35.03 C
ATOM 16 N7 G A2419 57.095 126.483 139.575 1.00 35.88 N
ATOM 17 C5 G A2419 57.926 127.324 140.297 1.00 35.45 C
ATOM 18 C6 G A2419 59.179 127.074 140.904 1.00 34.92 C
ATOM 19 O6 G A2419 59.831 126.025 140.920 1.00 35.67 O
ATOM 20 N1 G A2419 59.676 128.206 141.534 1.00 35.50 N
ATOM 21 C2 G A2419 59.054 129.423 141.574 1.00 35.10 C
ATOM 22 N2 G A2419 59.702 130.398 142.235 1.00 35.09 N
ATOM 23 N3 G A2419 57.884 129.671 141.009 1.00 35.83 N
ATOM 24 C4 G A2419 57.382 128.584 140.393 1.00 33.61 C
ATOM 25 P G A2420 56.123 130.466 134.845 1.00 36.57 P
ATOM 26 OP1 G A2420 55.667 131.321 133.736 1.00 38.92 O
ATOM 27 OP2 G A2420 56.584 129.083 134.565 1.00 42.00 O
ATOM 28 O5' G A2420 57.307 131.214 135.602 1.00 38.95 O
TER

ATOM 1 O3' G B2518 51.940 135.964 133.853 1.00 38.52 O
ATOM 2 P A B2519 52.121 134.361 133.746 1.00 38.90 P
ATOM 3 OP1 A B2519 52.622 134.073 132.378 1.00 42.35 O
ATOM 4 OP2 A B2519 50.907 133.677 134.229 1.00 39.67 O
ATOM 5 O5' A B2519 53.328 134.054 134.743 1.00 40.17 O
ATOM 6 C5' A B2519 53.095 133.553 136.078 1.00 39.48 C
ATOM 7 C4' A B2519 53.441 134.610 137.106 1.00 38.61 C
ATOM 8 O4' A B2519 54.874 134.854 137.120 1.00 38.09 O
ATOM 9 C3' A B2519 52.792 135.973 136.889 1.00 39.88 C
ATOM 10 O3' A B2519 52.550 136.568 138.150 1.00 45.51 O
ATOM 11 C2' A B2519 53.889 136.759 136.192 1.00 38.60 C
ATOM 12 O2' A B2519 53.750 138.150 136.371 1.00 35.71 O
ATOM 13 C1' A B2519 55.120 136.230 136.923 1.00 37.68 C
ATOM 14 N9 A B2519 56.387 136.373 136.208 1.00 37.41 N
ATOM 15 C8 A B2519 56.649 136.184 134.876 1.00 36.48 C
ATOM 16 N7 A B2519 57.907 136.369 134.554 1.00 37.61 N
ATOM 17 C5 A B2519 58.513 136.711 135.754 1.00 38.33 C
ATOM 18 C6 A B2519 59.844 137.026 136.093 1.00 38.57 C
ATOM 19 N6 A B2519 60.849 137.042 135.217 1.00 38.38 N
ATOM 20 N1 A B2519 60.108 137.322 137.385 1.00 37.66 N
ATOM 21 C2 A B2519 59.105 137.292 138.267 1.00 35.55 C
ATOM 22 N3 A B2519 57.822 137.007 138.074 1.00 36.52 N
ATOM 23 C4 A B2519 57.587 136.723 136.781 1.00 38.19 C
ATOM 24 P A B2520 51.061 136.612 138.727 1.00 46.06 P
ATOM 25 OP1 A B2520 50.878 135.379 139.522 1.00 50.02 O
ATOM 26 OP2 A B2520 50.107 136.930 137.638 1.00 54.53 O
ATOM 27 O5' A B2520 51.065 137.873 139.679 1.00 48.58 O
TER

Atoms:
OP1: (52.312,125.303,135.985)
OP2: (53.400,126.210,133.850)
C3': (55.125,129.613,137.133)
C1': (55.273,129.627,139.471)
C5': (53.471,127.637,137.347)
O6: (59.831,126.025,140.920)
O4': (54.011,129.083,139.156)
C8: (56.081,127.233,139.252)
C2: (59.054,129.423,141.574)
C6: (59.179,127.074,140.904)
C5: (57.926,127.324,140.297)
C4: (57.382,128.584,140.393)
P: (53.452,125.981,135.315)
C4': (53.822,129.063,137.713)
C2': (55.658,130.480,138.264)
O2': (55.004,131.730,138.351)
N1: (59.676,128.206,141.534)
N2: (59.702,130.398,142.235)
N3: (57.884,129.671,141.009)
N7: (57.095,126.483,139.575)
N9: (56.200,128.523,139.702)
O5': (53.620,127.428,135.950)
O3': (54.926,130.350,135.922)
OP1: (52.622,134.073,132.378)
OP2: (50.907,133.677,134.229)
C3': (52.792,135.973,136.889)
C1': (55.120,136.230,136.923)
C5': (53.095,133.553,136.078)
O4': (54.874,134.854,137.120)
C8: (56.649,136.184,134.876)
O2': (53.750,138.150,136.371)
C6: (59.844,137.026,136.093)
C5: (58.513,136.711,135.754)
C4: (57.587,136.723,136.781)
P: (52.121,134.361,133.746)
C4': (53.441,134.610,137.106)
C2': (53.889,136.759,136.192)
C2: (59.105,137.292,138.267)
N1: (60.108,137.322,137.385)
N3: (57.822,137.007,138.074)
N6: (60.849,137.042,135.217)
N7: (57.907,136.369,134.554)
N9: (56.387,136.373,136.208)
O5': (53.328,134.054,134.743)
O3': (52.550,136.568,138.150)
Image (generated by PyMOL):
PyMOL image
show in jmol