Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02419:02519
Extra
PDB:
ATOM 1 O3' A A2418 54.926 125.806 135.483 1.00 35.53 O
ATOM 2 P G A2419 53.547 126.559 135.104 1.00 38.52 P
ATOM 3 OP1 G A2419 52.414 125.849 135.759 1.00 37.32 O
ATOM 4 OP2 G A2419 53.519 126.784 133.632 1.00 42.86 O
ATOM 5 O5' G A2419 53.665 127.999 135.770 1.00 36.47 O
ATOM 6 C5' G A2419 53.646 128.148 137.184 1.00 34.29 C
ATOM 7 C4' G A2419 54.008 129.561 137.577 1.00 32.94 C
ATOM 8 O4' G A2419 54.179 129.568 139.019 1.00 31.71 O
ATOM 9 C3' G A2419 55.318 130.109 137.013 1.00 32.28 C
ATOM 10 O3' G A2419 55.116 130.862 135.815 1.00 30.54 O
ATOM 11 C2' G A2419 55.844 130.959 138.159 1.00 31.61 C
ATOM 12 O2' G A2419 55.175 132.199 138.260 1.00 33.83 O
ATOM 13 C1' G A2419 55.445 130.096 139.353 1.00 30.43 C
ATOM 14 N9 G A2419 56.357 128.980 139.595 1.00 29.19 N
ATOM 15 C8 G A2419 56.215 127.682 139.168 1.00 29.03 C
ATOM 16 N7 G A2419 57.216 126.918 139.508 1.00 30.09 N
ATOM 17 C5 G A2419 58.065 127.759 140.214 1.00 30.18 C
ATOM 18 C6 G A2419 59.319 127.498 140.829 1.00 30.18 C
ATOM 19 O6 G A2419 59.952 126.431 140.878 1.00 29.71 O
ATOM 20 N1 G A2419 59.836 128.636 141.433 1.00 27.85 N
ATOM 21 C2 G A2419 59.231 129.861 141.457 1.00 29.43 C
ATOM 22 N2 G A2419 59.883 130.831 142.127 1.00 30.67 N
ATOM 23 N3 G A2419 58.070 130.122 140.880 1.00 29.66 N
ATOM 24 C4 G A2419 57.546 129.032 140.284 1.00 28.95 C
ATOM 25 P G A2420 56.301 130.982 134.728 1.00 30.25 P
ATOM 26 OP1 G A2420 55.825 131.888 133.660 1.00 32.28 O
ATOM 27 OP2 G A2420 56.753 129.612 134.377 1.00 32.23 O
ATOM 28 O5' G A2420 57.486 131.717 135.497 1.00 30.79 O
TER
ATOM 1 O3' G B2518 51.956 136.418 133.945 1.00 35.12 O
ATOM 2 P A B2519 52.114 134.816 133.901 1.00 35.14 P
ATOM 3 OP1 A B2519 52.601 134.447 132.548 1.00 37.62 O
ATOM 4 OP2 A B2519 50.862 134.207 134.416 1.00 34.47 O
ATOM 5 O5' A B2519 53.327 134.519 134.894 1.00 36.02 O
ATOM 6 C5' A B2519 53.104 134.081 136.253 1.00 34.77 C
ATOM 7 C4' A B2519 53.463 135.184 137.227 1.00 34.33 C
ATOM 8 O4' A B2519 54.900 135.409 137.228 1.00 33.70 O
ATOM 9 C3' A B2519 52.829 136.539 136.931 1.00 35.49 C
ATOM 10 O3' A B2519 52.563 137.220 138.145 1.00 39.67 O
ATOM 11 C2' A B2519 53.940 137.268 136.196 1.00 34.33 C
ATOM 12 O2' A B2519 53.825 138.669 136.298 1.00 36.23 O
ATOM 13 C1' A B2519 55.161 136.768 136.959 1.00 33.32 C
ATOM 14 N9 A B2519 56.425 136.866 136.233 1.00 34.22 N
ATOM 15 C8 A B2519 56.659 136.703 134.892 1.00 33.53 C
ATOM 16 N7 A B2519 57.913 136.868 134.551 1.00 33.48 N
ATOM 17 C5 A B2519 58.549 137.156 135.748 1.00 34.37 C
ATOM 18 C6 A B2519 59.887 137.437 136.065 1.00 34.35 C
ATOM 19 N6 A B2519 60.871 137.471 135.165 1.00 33.78 N
ATOM 20 N1 A B2519 60.185 137.682 137.359 1.00 33.61 N
ATOM 21 C2 A B2519 59.203 137.642 138.260 1.00 30.79 C
ATOM 22 N3 A B2519 57.913 137.389 138.088 1.00 32.25 N
ATOM 23 C4 A B2519 57.645 137.154 136.793 1.00 34.20 C
ATOM 24 P A B2520 51.147 137.023 138.864 1.00 41.50 P
ATOM 25 OP1 A B2520 51.341 135.921 139.828 1.00 44.69 O
ATOM 26 OP2 A B2520 50.070 136.924 137.850 1.00 47.28 O
ATOM 27 O5' A B2520 50.930 138.373 139.665 1.00 42.23 O
TER
ATOM 2 P G A2419 53.547 126.559 135.104 1.00 38.52 P
ATOM 3 OP1 G A2419 52.414 125.849 135.759 1.00 37.32 O
ATOM 4 OP2 G A2419 53.519 126.784 133.632 1.00 42.86 O
ATOM 5 O5' G A2419 53.665 127.999 135.770 1.00 36.47 O
ATOM 6 C5' G A2419 53.646 128.148 137.184 1.00 34.29 C
ATOM 7 C4' G A2419 54.008 129.561 137.577 1.00 32.94 C
ATOM 8 O4' G A2419 54.179 129.568 139.019 1.00 31.71 O
ATOM 9 C3' G A2419 55.318 130.109 137.013 1.00 32.28 C
ATOM 10 O3' G A2419 55.116 130.862 135.815 1.00 30.54 O
ATOM 11 C2' G A2419 55.844 130.959 138.159 1.00 31.61 C
ATOM 12 O2' G A2419 55.175 132.199 138.260 1.00 33.83 O
ATOM 13 C1' G A2419 55.445 130.096 139.353 1.00 30.43 C
ATOM 14 N9 G A2419 56.357 128.980 139.595 1.00 29.19 N
ATOM 15 C8 G A2419 56.215 127.682 139.168 1.00 29.03 C
ATOM 16 N7 G A2419 57.216 126.918 139.508 1.00 30.09 N
ATOM 17 C5 G A2419 58.065 127.759 140.214 1.00 30.18 C
ATOM 18 C6 G A2419 59.319 127.498 140.829 1.00 30.18 C
ATOM 19 O6 G A2419 59.952 126.431 140.878 1.00 29.71 O
ATOM 20 N1 G A2419 59.836 128.636 141.433 1.00 27.85 N
ATOM 21 C2 G A2419 59.231 129.861 141.457 1.00 29.43 C
ATOM 22 N2 G A2419 59.883 130.831 142.127 1.00 30.67 N
ATOM 23 N3 G A2419 58.070 130.122 140.880 1.00 29.66 N
ATOM 24 C4 G A2419 57.546 129.032 140.284 1.00 28.95 C
ATOM 25 P G A2420 56.301 130.982 134.728 1.00 30.25 P
ATOM 26 OP1 G A2420 55.825 131.888 133.660 1.00 32.28 O
ATOM 27 OP2 G A2420 56.753 129.612 134.377 1.00 32.23 O
ATOM 28 O5' G A2420 57.486 131.717 135.497 1.00 30.79 O
TER
ATOM 1 O3' G B2518 51.956 136.418 133.945 1.00 35.12 O
ATOM 2 P A B2519 52.114 134.816 133.901 1.00 35.14 P
ATOM 3 OP1 A B2519 52.601 134.447 132.548 1.00 37.62 O
ATOM 4 OP2 A B2519 50.862 134.207 134.416 1.00 34.47 O
ATOM 5 O5' A B2519 53.327 134.519 134.894 1.00 36.02 O
ATOM 6 C5' A B2519 53.104 134.081 136.253 1.00 34.77 C
ATOM 7 C4' A B2519 53.463 135.184 137.227 1.00 34.33 C
ATOM 8 O4' A B2519 54.900 135.409 137.228 1.00 33.70 O
ATOM 9 C3' A B2519 52.829 136.539 136.931 1.00 35.49 C
ATOM 10 O3' A B2519 52.563 137.220 138.145 1.00 39.67 O
ATOM 11 C2' A B2519 53.940 137.268 136.196 1.00 34.33 C
ATOM 12 O2' A B2519 53.825 138.669 136.298 1.00 36.23 O
ATOM 13 C1' A B2519 55.161 136.768 136.959 1.00 33.32 C
ATOM 14 N9 A B2519 56.425 136.866 136.233 1.00 34.22 N
ATOM 15 C8 A B2519 56.659 136.703 134.892 1.00 33.53 C
ATOM 16 N7 A B2519 57.913 136.868 134.551 1.00 33.48 N
ATOM 17 C5 A B2519 58.549 137.156 135.748 1.00 34.37 C
ATOM 18 C6 A B2519 59.887 137.437 136.065 1.00 34.35 C
ATOM 19 N6 A B2519 60.871 137.471 135.165 1.00 33.78 N
ATOM 20 N1 A B2519 60.185 137.682 137.359 1.00 33.61 N
ATOM 21 C2 A B2519 59.203 137.642 138.260 1.00 30.79 C
ATOM 22 N3 A B2519 57.913 137.389 138.088 1.00 32.25 N
ATOM 23 C4 A B2519 57.645 137.154 136.793 1.00 34.20 C
ATOM 24 P A B2520 51.147 137.023 138.864 1.00 41.50 P
ATOM 25 OP1 A B2520 51.341 135.921 139.828 1.00 44.69 O
ATOM 26 OP2 A B2520 50.070 136.924 137.850 1.00 47.28 O
ATOM 27 O5' A B2520 50.930 138.373 139.665 1.00 42.23 O
TER
Atoms:
OP1: (52.414,125.849,135.759)
OP2: (53.519,126.784,133.632)
C3': (55.318,130.109,137.013)
C1': (55.445,130.096,139.353)
C5': (53.646,128.148,137.184)
O6: (59.952,126.431,140.878)
O4': (54.179,129.568,139.019)
C8: (56.215,127.682,139.168)
C2: (59.231,129.861,141.457)
C6: (59.319,127.498,140.829)
C5: (58.065,127.759,140.214)
C4: (57.546,129.032,140.284)
P: (53.547,126.559,135.104)
C4': (54.008,129.561,137.577)
C2': (55.844,130.959,138.159)
O2': (55.175,132.199,138.260)
N1: (59.836,128.636,141.433)
N2: (59.883,130.831,142.127)
N3: (58.070,130.122,140.880)
N7: (57.216,126.918,139.508)
N9: (56.357,128.980,139.595)
O5': (53.665,127.999,135.770)
O3': (55.116,130.862,135.815)
OP2: (53.519,126.784,133.632)
C3': (55.318,130.109,137.013)
C1': (55.445,130.096,139.353)
C5': (53.646,128.148,137.184)
O6: (59.952,126.431,140.878)
O4': (54.179,129.568,139.019)
C8: (56.215,127.682,139.168)
C2: (59.231,129.861,141.457)
C6: (59.319,127.498,140.829)
C5: (58.065,127.759,140.214)
C4: (57.546,129.032,140.284)
P: (53.547,126.559,135.104)
C4': (54.008,129.561,137.577)
C2': (55.844,130.959,138.159)
O2': (55.175,132.199,138.260)
N1: (59.836,128.636,141.433)
N2: (59.883,130.831,142.127)
N3: (58.070,130.122,140.880)
N7: (57.216,126.918,139.508)
N9: (56.357,128.980,139.595)
O5': (53.665,127.999,135.770)
O3': (55.116,130.862,135.815)
OP1: (52.601,134.447,132.548)
OP2: (50.862,134.207,134.416)
C3': (52.829,136.539,136.931)
C1': (55.161,136.768,136.959)
C5': (53.104,134.081,136.253)
O4': (54.900,135.409,137.228)
C8: (56.659,136.703,134.892)
O2': (53.825,138.669,136.298)
C6: (59.887,137.437,136.065)
C5: (58.549,137.156,135.748)
C4: (57.645,137.154,136.793)
P: (52.114,134.816,133.901)
C4': (53.463,135.184,137.227)
C2': (53.940,137.268,136.196)
C2: (59.203,137.642,138.260)
N1: (60.185,137.682,137.359)
N3: (57.913,137.389,138.088)
N6: (60.871,137.471,135.165)
N7: (57.913,136.868,134.551)
N9: (56.425,136.866,136.233)
O5': (53.327,134.519,134.894)
O3': (52.563,137.220,138.145)
OP2: (50.862,134.207,134.416)
C3': (52.829,136.539,136.931)
C1': (55.161,136.768,136.959)
C5': (53.104,134.081,136.253)
O4': (54.900,135.409,137.228)
C8: (56.659,136.703,134.892)
O2': (53.825,138.669,136.298)
C6: (59.887,137.437,136.065)
C5: (58.549,137.156,135.748)
C4: (57.645,137.154,136.793)
P: (52.114,134.816,133.901)
C4': (53.463,135.184,137.227)
C2': (53.940,137.268,136.196)
C2: (59.203,137.642,138.260)
N1: (60.185,137.682,137.359)
N3: (57.913,137.389,138.088)
N6: (60.871,137.471,135.165)
N7: (57.913,136.868,134.551)
N9: (56.425,136.866,136.233)
O5': (53.327,134.519,134.894)
O3': (52.563,137.220,138.145)
Image (generated by PyMOL):