Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02419:02519
Extra
PDB:
ATOM 1 O3' A A2418 54.834 126.698 135.411 1.00 41.18 O
ATOM 2 P G A2419 53.469 127.417 134.944 1.00 44.37 P
ATOM 3 OP1 G A2419 52.314 126.683 135.534 1.00 42.85 O
ATOM 4 OP2 G A2419 53.530 127.629 133.471 1.00 47.41 O
ATOM 5 O5' G A2419 53.526 128.857 135.616 1.00 43.62 O
ATOM 6 C5' G A2419 53.525 129.001 137.030 1.00 40.60 C
ATOM 7 C4' G A2419 53.911 130.403 137.409 1.00 41.16 C
ATOM 8 O4' G A2419 54.091 130.440 138.851 1.00 41.43 O
ATOM 9 C3' G A2419 55.224 130.914 136.816 1.00 40.30 C
ATOM 10 O3' G A2419 55.016 131.637 135.598 1.00 39.13 O
ATOM 11 C2' G A2419 55.774 131.784 137.937 1.00 40.94 C
ATOM 12 O2' G A2419 55.136 133.045 138.010 1.00 43.36 O
ATOM 13 C1' G A2419 55.371 130.955 139.155 1.00 41.35 C
ATOM 14 N9 G A2419 56.275 129.833 139.406 1.00 40.24 N
ATOM 15 C8 G A2419 56.134 128.530 138.993 1.00 39.22 C
ATOM 16 N7 G A2419 57.122 127.766 139.365 1.00 39.45 N
ATOM 17 C5 G A2419 57.964 128.614 140.070 1.00 39.79 C
ATOM 18 C6 G A2419 59.203 128.356 140.717 1.00 40.66 C
ATOM 19 O6 G A2419 59.821 127.287 140.810 1.00 40.37 O
ATOM 20 N1 G A2419 59.718 129.505 141.307 1.00 40.48 N
ATOM 21 C2 G A2419 59.115 130.735 141.298 1.00 41.83 C
ATOM 22 N2 G A2419 59.745 131.713 141.961 1.00 43.40 N
ATOM 23 N3 G A2419 57.970 130.989 140.694 1.00 41.44 N
ATOM 24 C4 G A2419 57.453 129.890 140.107 1.00 39.87 C
ATOM 25 P G A2420 56.224 131.807 134.538 1.00 40.70 P
ATOM 26 OP1 G A2420 55.743 132.731 133.484 1.00 42.65 O
ATOM 27 OP2 G A2420 56.753 130.471 134.157 1.00 42.53 O
ATOM 28 O5' G A2420 57.374 132.556 135.340 1.00 39.59 O
TER
ATOM 1 O3' G B2518 51.852 137.253 133.859 1.00 38.51 O
ATOM 2 P A B2519 52.013 135.656 133.770 1.00 35.82 P
ATOM 3 OP1 A B2519 52.453 135.354 132.384 1.00 39.81 O
ATOM 4 OP2 A B2519 50.778 135.016 134.291 1.00 34.96 O
ATOM 5 O5' A B2519 53.252 135.355 134.730 1.00 37.73 O
ATOM 6 C5' A B2519 53.068 134.849 136.070 1.00 37.80 C
ATOM 7 C4' A B2519 53.415 135.914 137.084 1.00 39.08 C
ATOM 8 O4' A B2519 54.850 136.169 137.092 1.00 38.26 O
ATOM 9 C3' A B2519 52.756 137.265 136.835 1.00 40.42 C
ATOM 10 O3' A B2519 52.480 137.898 138.073 1.00 42.67 O
ATOM 11 C2' A B2519 53.849 138.033 136.110 1.00 39.05 C
ATOM 12 O2' A B2519 53.705 139.430 136.223 1.00 41.96 O
ATOM 13 C1' A B2519 55.081 137.544 136.861 1.00 38.17 C
ATOM 14 N9 A B2519 56.344 137.692 136.143 1.00 38.07 N
ATOM 15 C8 A B2519 56.575 137.578 134.797 1.00 38.09 C
ATOM 16 N7 A B2519 57.829 137.738 134.462 1.00 38.34 N
ATOM 17 C5 A B2519 58.469 137.981 135.666 1.00 38.35 C
ATOM 18 C6 A B2519 59.813 138.224 135.987 1.00 38.16 C
ATOM 19 N6 A B2519 60.790 138.262 135.082 1.00 38.41 N
ATOM 20 N1 A B2519 60.122 138.427 137.288 1.00 38.75 N
ATOM 21 C2 A B2519 59.138 138.386 138.193 1.00 38.28 C
ATOM 22 N3 A B2519 57.838 138.166 138.013 1.00 38.50 N
ATOM 23 C4 A B2519 57.566 137.965 136.711 1.00 38.43 C
ATOM 24 P A B2520 50.971 137.980 138.590 1.00 44.59 P
ATOM 25 OP1 A B2520 50.708 136.737 139.337 1.00 46.98 O
ATOM 26 OP2 A B2520 50.077 138.360 137.473 1.00 49.72 O
ATOM 27 O5' A B2520 50.992 139.201 139.592 1.00 46.25 O
TER
ATOM 2 P G A2419 53.469 127.417 134.944 1.00 44.37 P
ATOM 3 OP1 G A2419 52.314 126.683 135.534 1.00 42.85 O
ATOM 4 OP2 G A2419 53.530 127.629 133.471 1.00 47.41 O
ATOM 5 O5' G A2419 53.526 128.857 135.616 1.00 43.62 O
ATOM 6 C5' G A2419 53.525 129.001 137.030 1.00 40.60 C
ATOM 7 C4' G A2419 53.911 130.403 137.409 1.00 41.16 C
ATOM 8 O4' G A2419 54.091 130.440 138.851 1.00 41.43 O
ATOM 9 C3' G A2419 55.224 130.914 136.816 1.00 40.30 C
ATOM 10 O3' G A2419 55.016 131.637 135.598 1.00 39.13 O
ATOM 11 C2' G A2419 55.774 131.784 137.937 1.00 40.94 C
ATOM 12 O2' G A2419 55.136 133.045 138.010 1.00 43.36 O
ATOM 13 C1' G A2419 55.371 130.955 139.155 1.00 41.35 C
ATOM 14 N9 G A2419 56.275 129.833 139.406 1.00 40.24 N
ATOM 15 C8 G A2419 56.134 128.530 138.993 1.00 39.22 C
ATOM 16 N7 G A2419 57.122 127.766 139.365 1.00 39.45 N
ATOM 17 C5 G A2419 57.964 128.614 140.070 1.00 39.79 C
ATOM 18 C6 G A2419 59.203 128.356 140.717 1.00 40.66 C
ATOM 19 O6 G A2419 59.821 127.287 140.810 1.00 40.37 O
ATOM 20 N1 G A2419 59.718 129.505 141.307 1.00 40.48 N
ATOM 21 C2 G A2419 59.115 130.735 141.298 1.00 41.83 C
ATOM 22 N2 G A2419 59.745 131.713 141.961 1.00 43.40 N
ATOM 23 N3 G A2419 57.970 130.989 140.694 1.00 41.44 N
ATOM 24 C4 G A2419 57.453 129.890 140.107 1.00 39.87 C
ATOM 25 P G A2420 56.224 131.807 134.538 1.00 40.70 P
ATOM 26 OP1 G A2420 55.743 132.731 133.484 1.00 42.65 O
ATOM 27 OP2 G A2420 56.753 130.471 134.157 1.00 42.53 O
ATOM 28 O5' G A2420 57.374 132.556 135.340 1.00 39.59 O
TER
ATOM 1 O3' G B2518 51.852 137.253 133.859 1.00 38.51 O
ATOM 2 P A B2519 52.013 135.656 133.770 1.00 35.82 P
ATOM 3 OP1 A B2519 52.453 135.354 132.384 1.00 39.81 O
ATOM 4 OP2 A B2519 50.778 135.016 134.291 1.00 34.96 O
ATOM 5 O5' A B2519 53.252 135.355 134.730 1.00 37.73 O
ATOM 6 C5' A B2519 53.068 134.849 136.070 1.00 37.80 C
ATOM 7 C4' A B2519 53.415 135.914 137.084 1.00 39.08 C
ATOM 8 O4' A B2519 54.850 136.169 137.092 1.00 38.26 O
ATOM 9 C3' A B2519 52.756 137.265 136.835 1.00 40.42 C
ATOM 10 O3' A B2519 52.480 137.898 138.073 1.00 42.67 O
ATOM 11 C2' A B2519 53.849 138.033 136.110 1.00 39.05 C
ATOM 12 O2' A B2519 53.705 139.430 136.223 1.00 41.96 O
ATOM 13 C1' A B2519 55.081 137.544 136.861 1.00 38.17 C
ATOM 14 N9 A B2519 56.344 137.692 136.143 1.00 38.07 N
ATOM 15 C8 A B2519 56.575 137.578 134.797 1.00 38.09 C
ATOM 16 N7 A B2519 57.829 137.738 134.462 1.00 38.34 N
ATOM 17 C5 A B2519 58.469 137.981 135.666 1.00 38.35 C
ATOM 18 C6 A B2519 59.813 138.224 135.987 1.00 38.16 C
ATOM 19 N6 A B2519 60.790 138.262 135.082 1.00 38.41 N
ATOM 20 N1 A B2519 60.122 138.427 137.288 1.00 38.75 N
ATOM 21 C2 A B2519 59.138 138.386 138.193 1.00 38.28 C
ATOM 22 N3 A B2519 57.838 138.166 138.013 1.00 38.50 N
ATOM 23 C4 A B2519 57.566 137.965 136.711 1.00 38.43 C
ATOM 24 P A B2520 50.971 137.980 138.590 1.00 44.59 P
ATOM 25 OP1 A B2520 50.708 136.737 139.337 1.00 46.98 O
ATOM 26 OP2 A B2520 50.077 138.360 137.473 1.00 49.72 O
ATOM 27 O5' A B2520 50.992 139.201 139.592 1.00 46.25 O
TER
Atoms:
OP1: (52.314,126.683,135.534)
OP2: (53.530,127.629,133.471)
C3': (55.224,130.914,136.816)
C1': (55.371,130.955,139.155)
C5': (53.525,129.001,137.030)
O6: (59.821,127.287,140.810)
O4': (54.091,130.440,138.851)
C8: (56.134,128.530,138.993)
C2: (59.115,130.735,141.298)
C6: (59.203,128.356,140.717)
C5: (57.964,128.614,140.070)
C4: (57.453,129.890,140.107)
P: (53.469,127.417,134.944)
C4': (53.911,130.403,137.409)
C2': (55.774,131.784,137.937)
O2': (55.136,133.045,138.010)
N1: (59.718,129.505,141.307)
N2: (59.745,131.713,141.961)
N3: (57.970,130.989,140.694)
N7: (57.122,127.766,139.365)
N9: (56.275,129.833,139.406)
O5': (53.526,128.857,135.616)
O3': (55.016,131.637,135.598)
OP2: (53.530,127.629,133.471)
C3': (55.224,130.914,136.816)
C1': (55.371,130.955,139.155)
C5': (53.525,129.001,137.030)
O6: (59.821,127.287,140.810)
O4': (54.091,130.440,138.851)
C8: (56.134,128.530,138.993)
C2: (59.115,130.735,141.298)
C6: (59.203,128.356,140.717)
C5: (57.964,128.614,140.070)
C4: (57.453,129.890,140.107)
P: (53.469,127.417,134.944)
C4': (53.911,130.403,137.409)
C2': (55.774,131.784,137.937)
O2': (55.136,133.045,138.010)
N1: (59.718,129.505,141.307)
N2: (59.745,131.713,141.961)
N3: (57.970,130.989,140.694)
N7: (57.122,127.766,139.365)
N9: (56.275,129.833,139.406)
O5': (53.526,128.857,135.616)
O3': (55.016,131.637,135.598)
OP1: (52.453,135.354,132.384)
OP2: (50.778,135.016,134.291)
C3': (52.756,137.265,136.835)
C1': (55.081,137.544,136.861)
C5': (53.068,134.849,136.070)
O4': (54.850,136.169,137.092)
C8: (56.575,137.578,134.797)
O2': (53.705,139.430,136.223)
C6: (59.813,138.224,135.987)
C5: (58.469,137.981,135.666)
C4: (57.566,137.965,136.711)
P: (52.013,135.656,133.770)
C4': (53.415,135.914,137.084)
C2': (53.849,138.033,136.110)
C2: (59.138,138.386,138.193)
N1: (60.122,138.427,137.288)
N3: (57.838,138.166,138.013)
N6: (60.790,138.262,135.082)
N7: (57.829,137.738,134.462)
N9: (56.344,137.692,136.143)
O5': (53.252,135.355,134.730)
O3': (52.480,137.898,138.073)
OP2: (50.778,135.016,134.291)
C3': (52.756,137.265,136.835)
C1': (55.081,137.544,136.861)
C5': (53.068,134.849,136.070)
O4': (54.850,136.169,137.092)
C8: (56.575,137.578,134.797)
O2': (53.705,139.430,136.223)
C6: (59.813,138.224,135.987)
C5: (58.469,137.981,135.666)
C4: (57.566,137.965,136.711)
P: (52.013,135.656,133.770)
C4': (53.415,135.914,137.084)
C2': (53.849,138.033,136.110)
C2: (59.138,138.386,138.193)
N1: (60.122,138.427,137.288)
N3: (57.838,138.166,138.013)
N6: (60.790,138.262,135.082)
N7: (57.829,137.738,134.462)
N9: (56.344,137.692,136.143)
O5': (53.252,135.355,134.730)
O3': (52.480,137.898,138.073)
Image (generated by PyMOL):