Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02419:02519
Extra
PDB:
ATOM 1 O3' A A2418 54.930 126.485 135.239 1.00 42.63 O
ATOM 2 P G A2419 53.544 127.232 134.883 1.00 44.43 P
ATOM 3 OP1 G A2419 52.445 126.570 135.639 1.00 44.18 O
ATOM 4 OP2 G A2419 53.435 127.376 133.408 1.00 45.97 O
ATOM 5 O5' G A2419 53.717 128.686 135.496 1.00 42.35 O
ATOM 6 C5' G A2419 53.613 128.888 136.896 1.00 39.54 C
ATOM 7 C4' G A2419 53.988 130.297 137.248 1.00 39.92 C
ATOM 8 O4' G A2419 54.130 130.351 138.693 1.00 40.10 O
ATOM 9 C3' G A2419 55.322 130.785 136.688 1.00 39.83 C
ATOM 10 O3' G A2419 55.173 131.482 135.447 1.00 38.92 O
ATOM 11 C2' G A2419 55.849 131.654 137.820 1.00 40.75 C
ATOM 12 O2' G A2419 55.204 132.911 137.895 1.00 42.63 O
ATOM 13 C1' G A2419 55.417 130.822 139.025 1.00 40.31 C
ATOM 14 N9 G A2419 56.282 129.667 139.258 1.00 38.48 N
ATOM 15 C8 G A2419 56.081 128.375 138.839 1.00 37.26 C
ATOM 16 N7 G A2419 57.045 127.570 139.185 1.00 38.85 N
ATOM 17 C5 G A2419 57.936 128.377 139.878 1.00 40.34 C
ATOM 18 C6 G A2419 59.182 128.065 140.488 1.00 41.92 C
ATOM 19 O6 G A2419 59.768 126.973 140.542 1.00 43.60 O
ATOM 20 N1 G A2419 59.755 129.187 141.079 1.00 41.64 N
ATOM 21 C2 G A2419 59.203 130.440 141.092 1.00 41.21 C
ATOM 22 N2 G A2419 59.897 131.385 141.735 1.00 42.14 N
ATOM 23 N3 G A2419 58.050 130.745 140.523 1.00 41.30 N
ATOM 24 C4 G A2419 57.475 129.672 139.938 1.00 39.77 C
ATOM 25 P G A2420 56.424 131.606 134.434 1.00 40.32 P
ATOM 26 OP1 G A2420 56.037 132.519 133.334 1.00 40.98 O
ATOM 27 OP2 G A2420 56.930 130.249 134.112 1.00 41.83 O
ATOM 28 O5' G A2420 57.550 132.346 135.278 1.00 40.22 O
TER
ATOM 1 O3' G B2518 52.060 136.982 133.657 1.00 38.70 O
ATOM 2 P A B2519 52.176 135.380 133.655 1.00 38.57 P
ATOM 3 OP1 A B2519 52.484 134.970 132.262 1.00 40.90 O
ATOM 4 OP2 A B2519 50.979 134.819 134.328 1.00 36.70 O
ATOM 5 O5' A B2519 53.478 135.100 134.533 1.00 39.95 O
ATOM 6 C5' A B2519 53.380 134.546 135.863 1.00 38.82 C
ATOM 7 C4' A B2519 53.701 135.602 136.891 1.00 37.80 C
ATOM 8 O4' A B2519 55.130 135.871 136.912 1.00 36.94 O
ATOM 9 C3' A B2519 53.027 136.946 136.646 1.00 38.02 C
ATOM 10 O3' A B2519 52.726 137.561 137.884 1.00 39.47 O
ATOM 11 C2' A B2519 54.117 137.735 135.942 1.00 36.25 C
ATOM 12 O2' A B2519 53.956 139.127 136.080 1.00 36.32 O
ATOM 13 C1' A B2519 55.347 137.249 136.699 1.00 36.72 C
ATOM 14 N9 A B2519 56.614 137.415 135.996 1.00 36.38 N
ATOM 15 C8 A B2519 56.863 137.327 134.653 1.00 37.10 C
ATOM 16 N7 A B2519 58.116 137.524 134.335 1.00 37.53 N
ATOM 17 C5 A B2519 58.734 137.760 135.551 1.00 37.16 C
ATOM 18 C6 A B2519 60.063 138.040 135.893 1.00 37.84 C
ATOM 19 N6 A B2519 61.047 138.144 134.997 1.00 38.74 N
ATOM 20 N1 A B2519 60.352 138.218 137.203 1.00 37.13 N
ATOM 21 C2 A B2519 59.361 138.130 138.093 1.00 35.92 C
ATOM 22 N3 A B2519 58.071 137.879 137.891 1.00 37.90 N
ATOM 23 C4 A B2519 57.821 137.698 136.583 1.00 36.99 C
ATOM 24 P A B2520 51.200 137.715 138.332 1.00 42.17 P
ATOM 25 OP1 A B2520 50.819 136.490 139.067 1.00 43.15 O
ATOM 26 OP2 A B2520 50.381 138.151 137.177 1.00 46.42 O
ATOM 27 O5' A B2520 51.246 138.928 139.342 1.00 41.26 O
TER
ATOM 2 P G A2419 53.544 127.232 134.883 1.00 44.43 P
ATOM 3 OP1 G A2419 52.445 126.570 135.639 1.00 44.18 O
ATOM 4 OP2 G A2419 53.435 127.376 133.408 1.00 45.97 O
ATOM 5 O5' G A2419 53.717 128.686 135.496 1.00 42.35 O
ATOM 6 C5' G A2419 53.613 128.888 136.896 1.00 39.54 C
ATOM 7 C4' G A2419 53.988 130.297 137.248 1.00 39.92 C
ATOM 8 O4' G A2419 54.130 130.351 138.693 1.00 40.10 O
ATOM 9 C3' G A2419 55.322 130.785 136.688 1.00 39.83 C
ATOM 10 O3' G A2419 55.173 131.482 135.447 1.00 38.92 O
ATOM 11 C2' G A2419 55.849 131.654 137.820 1.00 40.75 C
ATOM 12 O2' G A2419 55.204 132.911 137.895 1.00 42.63 O
ATOM 13 C1' G A2419 55.417 130.822 139.025 1.00 40.31 C
ATOM 14 N9 G A2419 56.282 129.667 139.258 1.00 38.48 N
ATOM 15 C8 G A2419 56.081 128.375 138.839 1.00 37.26 C
ATOM 16 N7 G A2419 57.045 127.570 139.185 1.00 38.85 N
ATOM 17 C5 G A2419 57.936 128.377 139.878 1.00 40.34 C
ATOM 18 C6 G A2419 59.182 128.065 140.488 1.00 41.92 C
ATOM 19 O6 G A2419 59.768 126.973 140.542 1.00 43.60 O
ATOM 20 N1 G A2419 59.755 129.187 141.079 1.00 41.64 N
ATOM 21 C2 G A2419 59.203 130.440 141.092 1.00 41.21 C
ATOM 22 N2 G A2419 59.897 131.385 141.735 1.00 42.14 N
ATOM 23 N3 G A2419 58.050 130.745 140.523 1.00 41.30 N
ATOM 24 C4 G A2419 57.475 129.672 139.938 1.00 39.77 C
ATOM 25 P G A2420 56.424 131.606 134.434 1.00 40.32 P
ATOM 26 OP1 G A2420 56.037 132.519 133.334 1.00 40.98 O
ATOM 27 OP2 G A2420 56.930 130.249 134.112 1.00 41.83 O
ATOM 28 O5' G A2420 57.550 132.346 135.278 1.00 40.22 O
TER
ATOM 1 O3' G B2518 52.060 136.982 133.657 1.00 38.70 O
ATOM 2 P A B2519 52.176 135.380 133.655 1.00 38.57 P
ATOM 3 OP1 A B2519 52.484 134.970 132.262 1.00 40.90 O
ATOM 4 OP2 A B2519 50.979 134.819 134.328 1.00 36.70 O
ATOM 5 O5' A B2519 53.478 135.100 134.533 1.00 39.95 O
ATOM 6 C5' A B2519 53.380 134.546 135.863 1.00 38.82 C
ATOM 7 C4' A B2519 53.701 135.602 136.891 1.00 37.80 C
ATOM 8 O4' A B2519 55.130 135.871 136.912 1.00 36.94 O
ATOM 9 C3' A B2519 53.027 136.946 136.646 1.00 38.02 C
ATOM 10 O3' A B2519 52.726 137.561 137.884 1.00 39.47 O
ATOM 11 C2' A B2519 54.117 137.735 135.942 1.00 36.25 C
ATOM 12 O2' A B2519 53.956 139.127 136.080 1.00 36.32 O
ATOM 13 C1' A B2519 55.347 137.249 136.699 1.00 36.72 C
ATOM 14 N9 A B2519 56.614 137.415 135.996 1.00 36.38 N
ATOM 15 C8 A B2519 56.863 137.327 134.653 1.00 37.10 C
ATOM 16 N7 A B2519 58.116 137.524 134.335 1.00 37.53 N
ATOM 17 C5 A B2519 58.734 137.760 135.551 1.00 37.16 C
ATOM 18 C6 A B2519 60.063 138.040 135.893 1.00 37.84 C
ATOM 19 N6 A B2519 61.047 138.144 134.997 1.00 38.74 N
ATOM 20 N1 A B2519 60.352 138.218 137.203 1.00 37.13 N
ATOM 21 C2 A B2519 59.361 138.130 138.093 1.00 35.92 C
ATOM 22 N3 A B2519 58.071 137.879 137.891 1.00 37.90 N
ATOM 23 C4 A B2519 57.821 137.698 136.583 1.00 36.99 C
ATOM 24 P A B2520 51.200 137.715 138.332 1.00 42.17 P
ATOM 25 OP1 A B2520 50.819 136.490 139.067 1.00 43.15 O
ATOM 26 OP2 A B2520 50.381 138.151 137.177 1.00 46.42 O
ATOM 27 O5' A B2520 51.246 138.928 139.342 1.00 41.26 O
TER
Atoms:
OP1: (52.445,126.570,135.639)
OP2: (53.435,127.376,133.408)
C3': (55.322,130.785,136.688)
C1': (55.417,130.822,139.025)
C5': (53.613,128.888,136.896)
O6: (59.768,126.973,140.542)
O4': (54.130,130.351,138.693)
C8: (56.081,128.375,138.839)
C2: (59.203,130.440,141.092)
C6: (59.182,128.065,140.488)
C5: (57.936,128.377,139.878)
C4: (57.475,129.672,139.938)
P: (53.544,127.232,134.883)
C4': (53.988,130.297,137.248)
C2': (55.849,131.654,137.820)
O2': (55.204,132.911,137.895)
N1: (59.755,129.187,141.079)
N2: (59.897,131.385,141.735)
N3: (58.050,130.745,140.523)
N7: (57.045,127.570,139.185)
N9: (56.282,129.667,139.258)
O5': (53.717,128.686,135.496)
O3': (55.173,131.482,135.447)
OP2: (53.435,127.376,133.408)
C3': (55.322,130.785,136.688)
C1': (55.417,130.822,139.025)
C5': (53.613,128.888,136.896)
O6: (59.768,126.973,140.542)
O4': (54.130,130.351,138.693)
C8: (56.081,128.375,138.839)
C2: (59.203,130.440,141.092)
C6: (59.182,128.065,140.488)
C5: (57.936,128.377,139.878)
C4: (57.475,129.672,139.938)
P: (53.544,127.232,134.883)
C4': (53.988,130.297,137.248)
C2': (55.849,131.654,137.820)
O2': (55.204,132.911,137.895)
N1: (59.755,129.187,141.079)
N2: (59.897,131.385,141.735)
N3: (58.050,130.745,140.523)
N7: (57.045,127.570,139.185)
N9: (56.282,129.667,139.258)
O5': (53.717,128.686,135.496)
O3': (55.173,131.482,135.447)
OP1: (52.484,134.970,132.262)
OP2: (50.979,134.819,134.328)
C3': (53.027,136.946,136.646)
C1': (55.347,137.249,136.699)
C5': (53.380,134.546,135.863)
O4': (55.130,135.871,136.912)
C8: (56.863,137.327,134.653)
O2': (53.956,139.127,136.080)
C6: (60.063,138.040,135.893)
C5: (58.734,137.760,135.551)
C4: (57.821,137.698,136.583)
P: (52.176,135.380,133.655)
C4': (53.701,135.602,136.891)
C2': (54.117,137.735,135.942)
C2: (59.361,138.130,138.093)
N1: (60.352,138.218,137.203)
N3: (58.071,137.879,137.891)
N6: (61.047,138.144,134.997)
N7: (58.116,137.524,134.335)
N9: (56.614,137.415,135.996)
O5': (53.478,135.100,134.533)
O3': (52.726,137.561,137.884)
OP2: (50.979,134.819,134.328)
C3': (53.027,136.946,136.646)
C1': (55.347,137.249,136.699)
C5': (53.380,134.546,135.863)
O4': (55.130,135.871,136.912)
C8: (56.863,137.327,134.653)
O2': (53.956,139.127,136.080)
C6: (60.063,138.040,135.893)
C5: (58.734,137.760,135.551)
C4: (57.821,137.698,136.583)
P: (52.176,135.380,133.655)
C4': (53.701,135.602,136.891)
C2': (54.117,137.735,135.942)
C2: (59.361,138.130,138.093)
N1: (60.352,138.218,137.203)
N3: (58.071,137.879,137.891)
N6: (61.047,138.144,134.997)
N7: (58.116,137.524,134.335)
N9: (56.614,137.415,135.996)
O5': (53.478,135.100,134.533)
O3': (52.726,137.561,137.884)
Image (generated by PyMOL):