Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02419:02519
Extra
PDB:
ATOM 1 O3' A A2418 54.966 126.789 135.841 1.00 49.09 O
ATOM 2 P G A2419 53.608 127.493 135.325 1.00 50.72 P
ATOM 3 OP1 G A2419 52.427 126.829 135.937 1.00 50.36 O
ATOM 4 OP2 G A2419 53.705 127.594 133.844 1.00 52.54 O
ATOM 5 O5' G A2419 53.679 128.966 135.924 1.00 50.88 O
ATOM 6 C5' G A2419 53.654 129.175 137.337 1.00 48.54 C
ATOM 7 C4' G A2419 54.021 130.599 137.677 1.00 47.94 C
ATOM 8 O4' G A2419 54.158 130.672 139.122 1.00 48.93 O
ATOM 9 C3' G A2419 55.348 131.106 137.121 1.00 47.79 C
ATOM 10 O3' G A2419 55.187 131.793 135.878 1.00 47.23 O
ATOM 11 C2' G A2419 55.857 131.993 138.251 1.00 49.17 C
ATOM 12 O2' G A2419 55.191 133.236 138.350 1.00 49.13 O
ATOM 13 C1' G A2419 55.442 131.159 139.457 1.00 49.59 C
ATOM 14 N9 G A2419 56.326 130.016 139.688 1.00 50.41 N
ATOM 15 C8 G A2419 56.128 128.719 139.278 1.00 49.74 C
ATOM 16 N7 G A2419 57.089 127.917 139.636 1.00 50.30 N
ATOM 17 C5 G A2419 57.978 128.729 140.326 1.00 50.84 C
ATOM 18 C6 G A2419 59.206 128.414 140.950 1.00 52.42 C
ATOM 19 O6 G A2419 59.769 127.315 141.031 1.00 55.15 O
ATOM 20 N1 G A2419 59.791 129.535 141.527 1.00 51.75 N
ATOM 21 C2 G A2419 59.263 130.795 141.512 1.00 51.70 C
ATOM 22 N2 G A2419 59.978 131.742 142.138 1.00 51.11 N
ATOM 23 N3 G A2419 58.115 131.105 140.931 1.00 51.97 N
ATOM 24 C4 G A2419 57.528 130.027 140.363 1.00 50.71 C
ATOM 25 P G A2420 56.451 131.988 134.891 1.00 48.11 P
ATOM 26 OP1 G A2420 56.040 132.940 133.832 1.00 47.91 O
ATOM 27 OP2 G A2420 56.993 130.660 134.509 1.00 49.74 O
ATOM 28 O5' G A2420 57.548 132.721 135.779 1.00 46.83 O
TER
ATOM 1 O3' G B2518 51.945 137.435 134.077 1.00 47.16 O
ATOM 2 P A B2519 52.099 135.835 134.110 1.00 46.70 P
ATOM 3 OP1 A B2519 52.454 135.401 132.744 1.00 47.28 O
ATOM 4 OP2 A B2519 50.913 135.236 134.781 1.00 43.75 O
ATOM 5 O5' A B2519 53.388 135.608 135.017 1.00 48.66 O
ATOM 6 C5' A B2519 53.270 135.076 136.349 1.00 47.66 C
ATOM 7 C4' A B2519 53.589 136.145 137.363 1.00 46.88 C
ATOM 8 O4' A B2519 55.021 136.390 137.395 1.00 44.49 O
ATOM 9 C3' A B2519 52.935 137.496 137.103 1.00 46.54 C
ATOM 10 O3' A B2519 52.646 138.128 138.342 1.00 48.93 O
ATOM 11 C2' A B2519 54.042 138.259 136.393 1.00 45.26 C
ATOM 12 O2' A B2519 53.898 139.659 136.517 1.00 44.82 O
ATOM 13 C1' A B2519 55.261 137.757 137.162 1.00 44.80 C
ATOM 14 N9 A B2519 56.543 137.886 136.482 1.00 44.10 N
ATOM 15 C8 A B2519 56.822 137.779 135.148 1.00 44.90 C
ATOM 16 N7 A B2519 58.086 137.944 134.859 1.00 45.81 N
ATOM 17 C5 A B2519 58.681 138.179 136.090 1.00 45.93 C
ATOM 18 C6 A B2519 60.010 138.441 136.467 1.00 45.38 C
ATOM 19 N6 A B2519 61.017 138.538 135.596 1.00 46.44 N
ATOM 20 N1 A B2519 60.270 138.614 137.781 1.00 42.88 N
ATOM 21 C2 A B2519 59.257 138.548 138.642 1.00 43.38 C
ATOM 22 N3 A B2519 57.965 138.326 138.408 1.00 45.07 N
ATOM 23 C4 A B2519 57.742 138.144 137.097 1.00 44.78 C
ATOM 24 P A B2520 51.142 138.161 138.874 1.00 50.57 P
ATOM 25 OP1 A B2520 50.875 136.883 139.547 1.00 52.01 O
ATOM 26 OP2 A B2520 50.259 138.599 137.777 1.00 55.73 O
ATOM 27 O5' A B2520 51.151 139.324 139.945 1.00 52.64 O
TER
ATOM 2 P G A2419 53.608 127.493 135.325 1.00 50.72 P
ATOM 3 OP1 G A2419 52.427 126.829 135.937 1.00 50.36 O
ATOM 4 OP2 G A2419 53.705 127.594 133.844 1.00 52.54 O
ATOM 5 O5' G A2419 53.679 128.966 135.924 1.00 50.88 O
ATOM 6 C5' G A2419 53.654 129.175 137.337 1.00 48.54 C
ATOM 7 C4' G A2419 54.021 130.599 137.677 1.00 47.94 C
ATOM 8 O4' G A2419 54.158 130.672 139.122 1.00 48.93 O
ATOM 9 C3' G A2419 55.348 131.106 137.121 1.00 47.79 C
ATOM 10 O3' G A2419 55.187 131.793 135.878 1.00 47.23 O
ATOM 11 C2' G A2419 55.857 131.993 138.251 1.00 49.17 C
ATOM 12 O2' G A2419 55.191 133.236 138.350 1.00 49.13 O
ATOM 13 C1' G A2419 55.442 131.159 139.457 1.00 49.59 C
ATOM 14 N9 G A2419 56.326 130.016 139.688 1.00 50.41 N
ATOM 15 C8 G A2419 56.128 128.719 139.278 1.00 49.74 C
ATOM 16 N7 G A2419 57.089 127.917 139.636 1.00 50.30 N
ATOM 17 C5 G A2419 57.978 128.729 140.326 1.00 50.84 C
ATOM 18 C6 G A2419 59.206 128.414 140.950 1.00 52.42 C
ATOM 19 O6 G A2419 59.769 127.315 141.031 1.00 55.15 O
ATOM 20 N1 G A2419 59.791 129.535 141.527 1.00 51.75 N
ATOM 21 C2 G A2419 59.263 130.795 141.512 1.00 51.70 C
ATOM 22 N2 G A2419 59.978 131.742 142.138 1.00 51.11 N
ATOM 23 N3 G A2419 58.115 131.105 140.931 1.00 51.97 N
ATOM 24 C4 G A2419 57.528 130.027 140.363 1.00 50.71 C
ATOM 25 P G A2420 56.451 131.988 134.891 1.00 48.11 P
ATOM 26 OP1 G A2420 56.040 132.940 133.832 1.00 47.91 O
ATOM 27 OP2 G A2420 56.993 130.660 134.509 1.00 49.74 O
ATOM 28 O5' G A2420 57.548 132.721 135.779 1.00 46.83 O
TER
ATOM 1 O3' G B2518 51.945 137.435 134.077 1.00 47.16 O
ATOM 2 P A B2519 52.099 135.835 134.110 1.00 46.70 P
ATOM 3 OP1 A B2519 52.454 135.401 132.744 1.00 47.28 O
ATOM 4 OP2 A B2519 50.913 135.236 134.781 1.00 43.75 O
ATOM 5 O5' A B2519 53.388 135.608 135.017 1.00 48.66 O
ATOM 6 C5' A B2519 53.270 135.076 136.349 1.00 47.66 C
ATOM 7 C4' A B2519 53.589 136.145 137.363 1.00 46.88 C
ATOM 8 O4' A B2519 55.021 136.390 137.395 1.00 44.49 O
ATOM 9 C3' A B2519 52.935 137.496 137.103 1.00 46.54 C
ATOM 10 O3' A B2519 52.646 138.128 138.342 1.00 48.93 O
ATOM 11 C2' A B2519 54.042 138.259 136.393 1.00 45.26 C
ATOM 12 O2' A B2519 53.898 139.659 136.517 1.00 44.82 O
ATOM 13 C1' A B2519 55.261 137.757 137.162 1.00 44.80 C
ATOM 14 N9 A B2519 56.543 137.886 136.482 1.00 44.10 N
ATOM 15 C8 A B2519 56.822 137.779 135.148 1.00 44.90 C
ATOM 16 N7 A B2519 58.086 137.944 134.859 1.00 45.81 N
ATOM 17 C5 A B2519 58.681 138.179 136.090 1.00 45.93 C
ATOM 18 C6 A B2519 60.010 138.441 136.467 1.00 45.38 C
ATOM 19 N6 A B2519 61.017 138.538 135.596 1.00 46.44 N
ATOM 20 N1 A B2519 60.270 138.614 137.781 1.00 42.88 N
ATOM 21 C2 A B2519 59.257 138.548 138.642 1.00 43.38 C
ATOM 22 N3 A B2519 57.965 138.326 138.408 1.00 45.07 N
ATOM 23 C4 A B2519 57.742 138.144 137.097 1.00 44.78 C
ATOM 24 P A B2520 51.142 138.161 138.874 1.00 50.57 P
ATOM 25 OP1 A B2520 50.875 136.883 139.547 1.00 52.01 O
ATOM 26 OP2 A B2520 50.259 138.599 137.777 1.00 55.73 O
ATOM 27 O5' A B2520 51.151 139.324 139.945 1.00 52.64 O
TER
Atoms:
OP1: (52.427,126.829,135.937)
OP2: (53.705,127.594,133.844)
C3': (55.348,131.106,137.121)
C1': (55.442,131.159,139.457)
C5': (53.654,129.175,137.337)
O6: (59.769,127.315,141.031)
O4': (54.158,130.672,139.122)
C8: (56.128,128.719,139.278)
C2: (59.263,130.795,141.512)
C6: (59.206,128.414,140.950)
C5: (57.978,128.729,140.326)
C4: (57.528,130.027,140.363)
P: (53.608,127.493,135.325)
C4': (54.021,130.599,137.677)
C2': (55.857,131.993,138.251)
O2': (55.191,133.236,138.350)
N1: (59.791,129.535,141.527)
N2: (59.978,131.742,142.138)
N3: (58.115,131.105,140.931)
N7: (57.089,127.917,139.636)
N9: (56.326,130.016,139.688)
O5': (53.679,128.966,135.924)
O3': (55.187,131.793,135.878)
OP2: (53.705,127.594,133.844)
C3': (55.348,131.106,137.121)
C1': (55.442,131.159,139.457)
C5': (53.654,129.175,137.337)
O6: (59.769,127.315,141.031)
O4': (54.158,130.672,139.122)
C8: (56.128,128.719,139.278)
C2: (59.263,130.795,141.512)
C6: (59.206,128.414,140.950)
C5: (57.978,128.729,140.326)
C4: (57.528,130.027,140.363)
P: (53.608,127.493,135.325)
C4': (54.021,130.599,137.677)
C2': (55.857,131.993,138.251)
O2': (55.191,133.236,138.350)
N1: (59.791,129.535,141.527)
N2: (59.978,131.742,142.138)
N3: (58.115,131.105,140.931)
N7: (57.089,127.917,139.636)
N9: (56.326,130.016,139.688)
O5': (53.679,128.966,135.924)
O3': (55.187,131.793,135.878)
OP1: (52.454,135.401,132.744)
OP2: (50.913,135.236,134.781)
C3': (52.935,137.496,137.103)
C1': (55.261,137.757,137.162)
C5': (53.270,135.076,136.349)
O4': (55.021,136.390,137.395)
C8: (56.822,137.779,135.148)
O2': (53.898,139.659,136.517)
C6: (60.010,138.441,136.467)
C5: (58.681,138.179,136.090)
C4: (57.742,138.144,137.097)
P: (52.099,135.835,134.110)
C4': (53.589,136.145,137.363)
C2': (54.042,138.259,136.393)
C2: (59.257,138.548,138.642)
N1: (60.270,138.614,137.781)
N3: (57.965,138.326,138.408)
N6: (61.017,138.538,135.596)
N7: (58.086,137.944,134.859)
N9: (56.543,137.886,136.482)
O5': (53.388,135.608,135.017)
O3': (52.646,138.128,138.342)
OP2: (50.913,135.236,134.781)
C3': (52.935,137.496,137.103)
C1': (55.261,137.757,137.162)
C5': (53.270,135.076,136.349)
O4': (55.021,136.390,137.395)
C8: (56.822,137.779,135.148)
O2': (53.898,139.659,136.517)
C6: (60.010,138.441,136.467)
C5: (58.681,138.179,136.090)
C4: (57.742,138.144,137.097)
P: (52.099,135.835,134.110)
C4': (53.589,136.145,137.363)
C2': (54.042,138.259,136.393)
C2: (59.257,138.548,138.642)
N1: (60.270,138.614,137.781)
N3: (57.965,138.326,138.408)
N6: (61.017,138.538,135.596)
N7: (58.086,137.944,134.859)
N9: (56.543,137.886,136.482)
O5': (53.388,135.608,135.017)
O3': (52.646,138.128,138.342)
Image (generated by PyMOL):