Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02419:02519
Extra
PDB:
ATOM 1 O3' A A2418 54.839 126.597 135.370 1.00 49.49 O
ATOM 2 P G A2419 53.473 127.347 134.964 1.00 52.71 P
ATOM 3 OP1 G A2419 52.330 126.683 135.657 1.00 51.88 O
ATOM 4 OP2 G A2419 53.444 127.498 133.482 1.00 54.25 O
ATOM 5 O5' G A2419 53.631 128.799 135.589 1.00 50.00 O
ATOM 6 C5' G A2419 53.634 128.976 136.993 1.00 47.32 C
ATOM 7 C4' G A2419 53.955 130.398 137.339 1.00 47.40 C
ATOM 8 O4' G A2419 54.075 130.471 138.784 1.00 49.20 O
ATOM 9 C3' G A2419 55.274 130.931 136.791 1.00 47.21 C
ATOM 10 O3' G A2419 55.104 131.617 135.551 1.00 46.26 O
ATOM 11 C2' G A2419 55.755 131.828 137.922 1.00 49.06 C
ATOM 12 O2' G A2419 55.058 133.060 137.971 1.00 50.08 O
ATOM 13 C1' G A2419 55.342 130.989 139.130 1.00 49.08 C
ATOM 14 N9 G A2419 56.235 129.858 139.385 1.00 48.45 N
ATOM 15 C8 G A2419 56.049 128.550 139.009 1.00 47.65 C
ATOM 16 N7 G A2419 57.031 127.771 139.362 1.00 47.55 N
ATOM 17 C5 G A2419 57.916 128.612 140.013 1.00 49.22 C
ATOM 18 C6 G A2419 59.167 128.336 140.604 1.00 50.84 C
ATOM 19 O6 G A2419 59.765 127.255 140.672 1.00 52.47 O
ATOM 20 N1 G A2419 59.734 129.480 141.155 1.00 51.30 N
ATOM 21 C2 G A2419 59.169 130.729 141.139 1.00 51.67 C
ATOM 22 N2 G A2419 59.865 131.705 141.737 1.00 52.57 N
ATOM 23 N3 G A2419 58.004 131.001 140.582 1.00 51.42 N
ATOM 24 C4 G A2419 57.436 129.902 140.042 1.00 49.29 C
ATOM 25 P G A2420 56.341 131.745 134.523 1.00 46.07 P
ATOM 26 OP1 G A2420 55.926 132.662 133.439 1.00 46.55 O
ATOM 27 OP2 G A2420 56.841 130.392 134.185 1.00 46.59 O
ATOM 28 O5' G A2420 57.473 132.492 135.353 1.00 46.14 O
TER
ATOM 1 O3' G B2518 51.906 137.220 133.638 1.00 47.56 O
ATOM 2 P A B2519 52.008 135.619 133.696 1.00 46.39 P
ATOM 3 OP1 A B2519 52.347 135.174 132.332 1.00 49.22 O
ATOM 4 OP2 A B2519 50.795 135.071 134.355 1.00 45.73 O
ATOM 5 O5' A B2519 53.281 135.366 134.618 1.00 47.27 O
ATOM 6 C5' A B2519 53.137 134.868 135.959 1.00 46.08 C
ATOM 7 C4' A B2519 53.464 135.951 136.958 1.00 45.18 C
ATOM 8 O4' A B2519 54.894 136.196 136.969 1.00 43.46 O
ATOM 9 C3' A B2519 52.803 137.303 136.711 1.00 44.66 C
ATOM 10 O3' A B2519 52.516 137.930 137.953 1.00 46.58 O
ATOM 11 C2' A B2519 53.904 138.080 136.012 1.00 43.62 C
ATOM 12 O2' A B2519 53.755 139.471 136.176 1.00 43.86 O
ATOM 13 C1' A B2519 55.129 137.569 136.762 1.00 43.63 C
ATOM 14 N9 A B2519 56.403 137.715 136.069 1.00 43.19 N
ATOM 15 C8 A B2519 56.659 137.649 134.729 1.00 44.19 C
ATOM 16 N7 A B2519 57.922 137.814 134.426 1.00 45.62 N
ATOM 17 C5 A B2519 58.538 138.004 135.652 1.00 43.75 C
ATOM 18 C6 A B2519 59.871 138.240 136.011 1.00 43.59 C
ATOM 19 N6 A B2519 60.864 138.342 135.131 1.00 43.52 N
ATOM 20 N1 A B2519 60.153 138.379 137.324 1.00 43.94 N
ATOM 21 C2 A B2519 59.153 138.301 138.203 1.00 43.35 C
ATOM 22 N3 A B2519 57.859 138.094 137.986 1.00 43.94 N
ATOM 23 C4 A B2519 57.615 137.948 136.673 1.00 43.95 C
ATOM 24 P A B2520 50.998 138.027 138.453 1.00 49.68 P
ATOM 25 OP1 A B2520 50.662 136.772 139.163 1.00 50.25 O
ATOM 26 OP2 A B2520 50.142 138.476 137.336 1.00 53.24 O
ATOM 27 O5' A B2520 51.026 139.209 139.503 1.00 49.42 O
TER
ATOM 2 P G A2419 53.473 127.347 134.964 1.00 52.71 P
ATOM 3 OP1 G A2419 52.330 126.683 135.657 1.00 51.88 O
ATOM 4 OP2 G A2419 53.444 127.498 133.482 1.00 54.25 O
ATOM 5 O5' G A2419 53.631 128.799 135.589 1.00 50.00 O
ATOM 6 C5' G A2419 53.634 128.976 136.993 1.00 47.32 C
ATOM 7 C4' G A2419 53.955 130.398 137.339 1.00 47.40 C
ATOM 8 O4' G A2419 54.075 130.471 138.784 1.00 49.20 O
ATOM 9 C3' G A2419 55.274 130.931 136.791 1.00 47.21 C
ATOM 10 O3' G A2419 55.104 131.617 135.551 1.00 46.26 O
ATOM 11 C2' G A2419 55.755 131.828 137.922 1.00 49.06 C
ATOM 12 O2' G A2419 55.058 133.060 137.971 1.00 50.08 O
ATOM 13 C1' G A2419 55.342 130.989 139.130 1.00 49.08 C
ATOM 14 N9 G A2419 56.235 129.858 139.385 1.00 48.45 N
ATOM 15 C8 G A2419 56.049 128.550 139.009 1.00 47.65 C
ATOM 16 N7 G A2419 57.031 127.771 139.362 1.00 47.55 N
ATOM 17 C5 G A2419 57.916 128.612 140.013 1.00 49.22 C
ATOM 18 C6 G A2419 59.167 128.336 140.604 1.00 50.84 C
ATOM 19 O6 G A2419 59.765 127.255 140.672 1.00 52.47 O
ATOM 20 N1 G A2419 59.734 129.480 141.155 1.00 51.30 N
ATOM 21 C2 G A2419 59.169 130.729 141.139 1.00 51.67 C
ATOM 22 N2 G A2419 59.865 131.705 141.737 1.00 52.57 N
ATOM 23 N3 G A2419 58.004 131.001 140.582 1.00 51.42 N
ATOM 24 C4 G A2419 57.436 129.902 140.042 1.00 49.29 C
ATOM 25 P G A2420 56.341 131.745 134.523 1.00 46.07 P
ATOM 26 OP1 G A2420 55.926 132.662 133.439 1.00 46.55 O
ATOM 27 OP2 G A2420 56.841 130.392 134.185 1.00 46.59 O
ATOM 28 O5' G A2420 57.473 132.492 135.353 1.00 46.14 O
TER
ATOM 1 O3' G B2518 51.906 137.220 133.638 1.00 47.56 O
ATOM 2 P A B2519 52.008 135.619 133.696 1.00 46.39 P
ATOM 3 OP1 A B2519 52.347 135.174 132.332 1.00 49.22 O
ATOM 4 OP2 A B2519 50.795 135.071 134.355 1.00 45.73 O
ATOM 5 O5' A B2519 53.281 135.366 134.618 1.00 47.27 O
ATOM 6 C5' A B2519 53.137 134.868 135.959 1.00 46.08 C
ATOM 7 C4' A B2519 53.464 135.951 136.958 1.00 45.18 C
ATOM 8 O4' A B2519 54.894 136.196 136.969 1.00 43.46 O
ATOM 9 C3' A B2519 52.803 137.303 136.711 1.00 44.66 C
ATOM 10 O3' A B2519 52.516 137.930 137.953 1.00 46.58 O
ATOM 11 C2' A B2519 53.904 138.080 136.012 1.00 43.62 C
ATOM 12 O2' A B2519 53.755 139.471 136.176 1.00 43.86 O
ATOM 13 C1' A B2519 55.129 137.569 136.762 1.00 43.63 C
ATOM 14 N9 A B2519 56.403 137.715 136.069 1.00 43.19 N
ATOM 15 C8 A B2519 56.659 137.649 134.729 1.00 44.19 C
ATOM 16 N7 A B2519 57.922 137.814 134.426 1.00 45.62 N
ATOM 17 C5 A B2519 58.538 138.004 135.652 1.00 43.75 C
ATOM 18 C6 A B2519 59.871 138.240 136.011 1.00 43.59 C
ATOM 19 N6 A B2519 60.864 138.342 135.131 1.00 43.52 N
ATOM 20 N1 A B2519 60.153 138.379 137.324 1.00 43.94 N
ATOM 21 C2 A B2519 59.153 138.301 138.203 1.00 43.35 C
ATOM 22 N3 A B2519 57.859 138.094 137.986 1.00 43.94 N
ATOM 23 C4 A B2519 57.615 137.948 136.673 1.00 43.95 C
ATOM 24 P A B2520 50.998 138.027 138.453 1.00 49.68 P
ATOM 25 OP1 A B2520 50.662 136.772 139.163 1.00 50.25 O
ATOM 26 OP2 A B2520 50.142 138.476 137.336 1.00 53.24 O
ATOM 27 O5' A B2520 51.026 139.209 139.503 1.00 49.42 O
TER
Atoms:
OP1: (52.330,126.683,135.657)
OP2: (53.444,127.498,133.482)
C3': (55.274,130.931,136.791)
C1': (55.342,130.989,139.130)
C5': (53.634,128.976,136.993)
O6: (59.765,127.255,140.672)
O4': (54.075,130.471,138.784)
C8: (56.049,128.550,139.009)
C2: (59.169,130.729,141.139)
C6: (59.167,128.336,140.604)
C5: (57.916,128.612,140.013)
C4: (57.436,129.902,140.042)
P: (53.473,127.347,134.964)
C4': (53.955,130.398,137.339)
C2': (55.755,131.828,137.922)
O2': (55.058,133.060,137.971)
N1: (59.734,129.480,141.155)
N2: (59.865,131.705,141.737)
N3: (58.004,131.001,140.582)
N7: (57.031,127.771,139.362)
N9: (56.235,129.858,139.385)
O5': (53.631,128.799,135.589)
O3': (55.104,131.617,135.551)
OP2: (53.444,127.498,133.482)
C3': (55.274,130.931,136.791)
C1': (55.342,130.989,139.130)
C5': (53.634,128.976,136.993)
O6: (59.765,127.255,140.672)
O4': (54.075,130.471,138.784)
C8: (56.049,128.550,139.009)
C2: (59.169,130.729,141.139)
C6: (59.167,128.336,140.604)
C5: (57.916,128.612,140.013)
C4: (57.436,129.902,140.042)
P: (53.473,127.347,134.964)
C4': (53.955,130.398,137.339)
C2': (55.755,131.828,137.922)
O2': (55.058,133.060,137.971)
N1: (59.734,129.480,141.155)
N2: (59.865,131.705,141.737)
N3: (58.004,131.001,140.582)
N7: (57.031,127.771,139.362)
N9: (56.235,129.858,139.385)
O5': (53.631,128.799,135.589)
O3': (55.104,131.617,135.551)
OP1: (52.347,135.174,132.332)
OP2: (50.795,135.071,134.355)
C3': (52.803,137.303,136.711)
C1': (55.129,137.569,136.762)
C5': (53.137,134.868,135.959)
O4': (54.894,136.196,136.969)
C8: (56.659,137.649,134.729)
O2': (53.755,139.471,136.176)
C6: (59.871,138.240,136.011)
C5: (58.538,138.004,135.652)
C4: (57.615,137.948,136.673)
P: (52.008,135.619,133.696)
C4': (53.464,135.951,136.958)
C2': (53.904,138.080,136.012)
C2: (59.153,138.301,138.203)
N1: (60.153,138.379,137.324)
N3: (57.859,138.094,137.986)
N6: (60.864,138.342,135.131)
N7: (57.922,137.814,134.426)
N9: (56.403,137.715,136.069)
O5': (53.281,135.366,134.618)
O3': (52.516,137.930,137.953)
OP2: (50.795,135.071,134.355)
C3': (52.803,137.303,136.711)
C1': (55.129,137.569,136.762)
C5': (53.137,134.868,135.959)
O4': (54.894,136.196,136.969)
C8: (56.659,137.649,134.729)
O2': (53.755,139.471,136.176)
C6: (59.871,138.240,136.011)
C5: (58.538,138.004,135.652)
C4: (57.615,137.948,136.673)
P: (52.008,135.619,133.696)
C4': (53.464,135.951,136.958)
C2': (53.904,138.080,136.012)
C2: (59.153,138.301,138.203)
N1: (60.153,138.379,137.324)
N3: (57.859,138.094,137.986)
N6: (60.864,138.342,135.131)
N7: (57.922,137.814,134.426)
N9: (56.403,137.715,136.069)
O5': (53.281,135.366,134.618)
O3': (52.516,137.930,137.953)
Image (generated by PyMOL):