Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:084:087
Extra
PDB:
ATOM 1 O3' C A 83 40.328 168.557 22.972 1.00 61.57 O
ATOM 2 P G A 84 39.281 168.795 21.779 1.00 61.37 P
ATOM 3 OP1 G A 84 40.024 168.671 20.496 1.00 62.28 O
ATOM 4 OP2 G A 84 38.501 170.028 22.063 1.00 61.60 O
ATOM 5 O5' G A 84 38.295 167.553 21.904 1.00 61.37 O
ATOM 6 C5' G A 84 38.741 166.224 21.592 1.00 58.16 C
ATOM 7 C4' G A 84 37.566 165.283 21.533 1.00 57.21 C
ATOM 8 O4' G A 84 36.967 165.174 22.848 1.00 55.54 O
ATOM 9 C3' G A 84 36.398 165.730 20.675 1.00 57.61 C
ATOM 10 O3' G A 84 36.633 165.515 19.293 1.00 61.57 O
ATOM 11 C2' G A 84 35.272 164.865 21.219 1.00 54.13 C
ATOM 12 O2' G A 84 35.344 163.531 20.775 1.00 52.51 O
ATOM 13 C1' G A 84 35.585 164.892 22.712 1.00 52.79 C
ATOM 14 N9 G A 84 34.820 165.915 23.412 1.00 51.50 N
ATOM 15 C8 G A 84 35.234 167.162 23.820 1.00 50.78 C
ATOM 16 N7 G A 84 34.292 167.841 24.420 1.00 50.65 N
ATOM 17 C5 G A 84 33.194 166.990 24.403 1.00 50.63 C
ATOM 18 C6 G A 84 31.871 167.172 24.901 1.00 51.39 C
ATOM 19 O6 G A 84 31.383 168.163 25.469 1.00 53.05 O
ATOM 20 N1 G A 84 31.083 166.043 24.677 1.00 51.92 N
ATOM 21 C2 G A 84 31.506 164.890 24.048 1.00 51.09 C
ATOM 22 N2 G A 84 30.604 163.898 23.928 1.00 49.93 N
ATOM 23 N3 G A 84 32.726 164.720 23.574 1.00 50.34 N
ATOM 24 C4 G A 84 33.509 165.799 23.787 1.00 50.94 C
ATOM 25 P A A 85 36.306 166.683 18.235 1.00 63.28 P
ATOM 26 OP1 A A 85 37.605 167.302 17.852 1.00 61.34 O
ATOM 27 OP2 A A 85 35.210 167.542 18.771 1.00 62.43 O
ATOM 28 O5' A A 85 35.707 165.883 16.995 1.00 63.92 O
TER
ATOM 1 O3' A B 86 38.339 164.729 13.525 1.00 70.94 O
ATOM 2 P G B 87 38.111 163.165 13.791 1.00 69.98 P
ATOM 3 OP1 G B 87 39.407 162.564 14.205 1.00 68.65 O
ATOM 4 OP2 G B 87 37.398 162.621 12.607 1.00 70.85 O
ATOM 5 O5' G B 87 37.087 163.138 15.011 1.00 69.26 O
ATOM 6 C5' G B 87 37.538 163.241 16.371 1.00 67.92 C
ATOM 7 C4' G B 87 36.980 162.097 17.178 1.00 66.07 C
ATOM 8 O4' G B 87 35.531 162.150 17.089 1.00 66.45 O
ATOM 9 C3' G B 87 37.374 160.714 16.676 1.00 65.65 C
ATOM 10 O3' G B 87 37.401 159.812 17.771 1.00 64.97 O
ATOM 11 C2' G B 87 36.237 160.371 15.720 1.00 65.44 C
ATOM 12 O2' G B 87 36.046 158.986 15.531 1.00 63.97 O
ATOM 13 C1' G B 87 35.042 160.993 16.436 1.00 66.47 C
ATOM 14 N9 G B 87 33.979 161.414 15.530 1.00 68.47 N
ATOM 15 C8 G B 87 34.120 162.159 14.384 1.00 69.40 C
ATOM 16 N7 G B 87 32.987 162.394 13.784 1.00 70.08 N
ATOM 17 C5 G B 87 32.041 161.765 14.578 1.00 70.95 C
ATOM 18 C6 G B 87 30.637 161.680 14.432 1.00 72.18 C
ATOM 19 O6 G B 87 29.922 162.156 13.541 1.00 73.97 O
ATOM 20 N1 G B 87 30.062 160.951 15.464 1.00 72.24 N
ATOM 21 C2 G B 87 30.748 160.378 16.503 1.00 71.76 C
ATOM 22 N2 G B 87 30.009 159.713 17.397 1.00 72.72 N
ATOM 23 N3 G B 87 32.058 160.449 16.652 1.00 70.87 N
ATOM 24 C4 G B 87 32.638 161.154 15.660 1.00 70.10 C
ATOM 25 P A B 88 38.749 159.013 18.112 1.00 64.07 P
ATOM 26 OP1 A B 88 39.810 159.455 17.166 1.00 65.29 O
ATOM 27 OP2 A B 88 38.425 157.572 18.222 1.00 64.51 O
ATOM 28 O5' A B 88 39.126 159.544 19.560 1.00 62.63 O
TER
ATOM 2 P G A 84 39.281 168.795 21.779 1.00 61.37 P
ATOM 3 OP1 G A 84 40.024 168.671 20.496 1.00 62.28 O
ATOM 4 OP2 G A 84 38.501 170.028 22.063 1.00 61.60 O
ATOM 5 O5' G A 84 38.295 167.553 21.904 1.00 61.37 O
ATOM 6 C5' G A 84 38.741 166.224 21.592 1.00 58.16 C
ATOM 7 C4' G A 84 37.566 165.283 21.533 1.00 57.21 C
ATOM 8 O4' G A 84 36.967 165.174 22.848 1.00 55.54 O
ATOM 9 C3' G A 84 36.398 165.730 20.675 1.00 57.61 C
ATOM 10 O3' G A 84 36.633 165.515 19.293 1.00 61.57 O
ATOM 11 C2' G A 84 35.272 164.865 21.219 1.00 54.13 C
ATOM 12 O2' G A 84 35.344 163.531 20.775 1.00 52.51 O
ATOM 13 C1' G A 84 35.585 164.892 22.712 1.00 52.79 C
ATOM 14 N9 G A 84 34.820 165.915 23.412 1.00 51.50 N
ATOM 15 C8 G A 84 35.234 167.162 23.820 1.00 50.78 C
ATOM 16 N7 G A 84 34.292 167.841 24.420 1.00 50.65 N
ATOM 17 C5 G A 84 33.194 166.990 24.403 1.00 50.63 C
ATOM 18 C6 G A 84 31.871 167.172 24.901 1.00 51.39 C
ATOM 19 O6 G A 84 31.383 168.163 25.469 1.00 53.05 O
ATOM 20 N1 G A 84 31.083 166.043 24.677 1.00 51.92 N
ATOM 21 C2 G A 84 31.506 164.890 24.048 1.00 51.09 C
ATOM 22 N2 G A 84 30.604 163.898 23.928 1.00 49.93 N
ATOM 23 N3 G A 84 32.726 164.720 23.574 1.00 50.34 N
ATOM 24 C4 G A 84 33.509 165.799 23.787 1.00 50.94 C
ATOM 25 P A A 85 36.306 166.683 18.235 1.00 63.28 P
ATOM 26 OP1 A A 85 37.605 167.302 17.852 1.00 61.34 O
ATOM 27 OP2 A A 85 35.210 167.542 18.771 1.00 62.43 O
ATOM 28 O5' A A 85 35.707 165.883 16.995 1.00 63.92 O
TER
ATOM 1 O3' A B 86 38.339 164.729 13.525 1.00 70.94 O
ATOM 2 P G B 87 38.111 163.165 13.791 1.00 69.98 P
ATOM 3 OP1 G B 87 39.407 162.564 14.205 1.00 68.65 O
ATOM 4 OP2 G B 87 37.398 162.621 12.607 1.00 70.85 O
ATOM 5 O5' G B 87 37.087 163.138 15.011 1.00 69.26 O
ATOM 6 C5' G B 87 37.538 163.241 16.371 1.00 67.92 C
ATOM 7 C4' G B 87 36.980 162.097 17.178 1.00 66.07 C
ATOM 8 O4' G B 87 35.531 162.150 17.089 1.00 66.45 O
ATOM 9 C3' G B 87 37.374 160.714 16.676 1.00 65.65 C
ATOM 10 O3' G B 87 37.401 159.812 17.771 1.00 64.97 O
ATOM 11 C2' G B 87 36.237 160.371 15.720 1.00 65.44 C
ATOM 12 O2' G B 87 36.046 158.986 15.531 1.00 63.97 O
ATOM 13 C1' G B 87 35.042 160.993 16.436 1.00 66.47 C
ATOM 14 N9 G B 87 33.979 161.414 15.530 1.00 68.47 N
ATOM 15 C8 G B 87 34.120 162.159 14.384 1.00 69.40 C
ATOM 16 N7 G B 87 32.987 162.394 13.784 1.00 70.08 N
ATOM 17 C5 G B 87 32.041 161.765 14.578 1.00 70.95 C
ATOM 18 C6 G B 87 30.637 161.680 14.432 1.00 72.18 C
ATOM 19 O6 G B 87 29.922 162.156 13.541 1.00 73.97 O
ATOM 20 N1 G B 87 30.062 160.951 15.464 1.00 72.24 N
ATOM 21 C2 G B 87 30.748 160.378 16.503 1.00 71.76 C
ATOM 22 N2 G B 87 30.009 159.713 17.397 1.00 72.72 N
ATOM 23 N3 G B 87 32.058 160.449 16.652 1.00 70.87 N
ATOM 24 C4 G B 87 32.638 161.154 15.660 1.00 70.10 C
ATOM 25 P A B 88 38.749 159.013 18.112 1.00 64.07 P
ATOM 26 OP1 A B 88 39.810 159.455 17.166 1.00 65.29 O
ATOM 27 OP2 A B 88 38.425 157.572 18.222 1.00 64.51 O
ATOM 28 O5' A B 88 39.126 159.544 19.560 1.00 62.63 O
TER
Atoms:
OP1: (40.024,168.671,20.496)
OP2: (38.501,170.028,22.063)
C3': (36.398,165.730,20.675)
C1': (35.585,164.892,22.712)
C5': (38.741,166.224,21.592)
O6: (31.383,168.163,25.469)
O4': (36.967,165.174,22.848)
C8: (35.234,167.162,23.820)
C2: (31.506,164.890,24.048)
C6: (31.871,167.172,24.901)
C5: (33.194,166.990,24.403)
C4: (33.509,165.799,23.787)
P: (39.281,168.795,21.779)
C4': (37.566,165.283,21.533)
C2': (35.272,164.865,21.219)
O2': (35.344,163.531,20.775)
N1: (31.083,166.043,24.677)
N2: (30.604,163.898,23.928)
N3: (32.726,164.720,23.574)
N7: (34.292,167.841,24.420)
N9: (34.820,165.915,23.412)
O5': (38.295,167.553,21.904)
O3': (36.633,165.515,19.293)
OP2: (38.501,170.028,22.063)
C3': (36.398,165.730,20.675)
C1': (35.585,164.892,22.712)
C5': (38.741,166.224,21.592)
O6: (31.383,168.163,25.469)
O4': (36.967,165.174,22.848)
C8: (35.234,167.162,23.820)
C2: (31.506,164.890,24.048)
C6: (31.871,167.172,24.901)
C5: (33.194,166.990,24.403)
C4: (33.509,165.799,23.787)
P: (39.281,168.795,21.779)
C4': (37.566,165.283,21.533)
C2': (35.272,164.865,21.219)
O2': (35.344,163.531,20.775)
N1: (31.083,166.043,24.677)
N2: (30.604,163.898,23.928)
N3: (32.726,164.720,23.574)
N7: (34.292,167.841,24.420)
N9: (34.820,165.915,23.412)
O5': (38.295,167.553,21.904)
O3': (36.633,165.515,19.293)
OP1: (39.407,162.564,14.205)
OP2: (37.398,162.621,12.607)
C3': (37.374,160.714,16.676)
C1': (35.042,160.993,16.436)
C5': (37.538,163.241,16.371)
O6: (29.922,162.156,13.541)
O4': (35.531,162.150,17.089)
C8: (34.120,162.159,14.384)
C2: (30.748,160.378,16.503)
C6: (30.637,161.680,14.432)
C5: (32.041,161.765,14.578)
C4: (32.638,161.154,15.660)
P: (38.111,163.165,13.791)
C4': (36.980,162.097,17.178)
C2': (36.237,160.371,15.720)
O2': (36.046,158.986,15.531)
N1: (30.062,160.951,15.464)
N2: (30.009,159.713,17.397)
N3: (32.058,160.449,16.652)
N7: (32.987,162.394,13.784)
N9: (33.979,161.414,15.530)
O5': (37.087,163.138,15.011)
O3': (37.401,159.812,17.771)
OP2: (37.398,162.621,12.607)
C3': (37.374,160.714,16.676)
C1': (35.042,160.993,16.436)
C5': (37.538,163.241,16.371)
O6: (29.922,162.156,13.541)
O4': (35.531,162.150,17.089)
C8: (34.120,162.159,14.384)
C2: (30.748,160.378,16.503)
C6: (30.637,161.680,14.432)
C5: (32.041,161.765,14.578)
C4: (32.638,161.154,15.660)
P: (38.111,163.165,13.791)
C4': (36.980,162.097,17.178)
C2': (36.237,160.371,15.720)
O2': (36.046,158.986,15.531)
N1: (30.062,160.951,15.464)
N2: (30.009,159.713,17.397)
N3: (32.058,160.449,16.652)
N7: (32.987,162.394,13.784)
N9: (33.979,161.414,15.530)
O5': (37.087,163.138,15.011)
O3': (37.401,159.812,17.771)
Image (generated by PyMOL):