Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1031:A1029
Extra
PDB:
ATOM 1 O3' G A1030 35.041 100.915 90.123 1.00 33.64 O
ATOM 2 P G A1031 33.972 102.109 90.143 1.00 32.97 P
ATOM 3 OP1 G A1031 33.277 101.978 88.865 1.00 35.03 O
ATOM 4 OP2 G A1031 34.579 103.421 90.511 1.00 33.95 O
ATOM 5 O5' G A1031 33.036 101.675 91.338 1.00 31.70 O
ATOM 6 C5' G A1031 33.612 101.404 92.622 1.00 33.57 C
ATOM 7 C4' G A1031 32.529 101.028 93.589 1.00 34.40 C
ATOM 8 O4' G A1031 32.007 99.727 93.199 1.00 35.60 O
ATOM 9 C3' G A1031 32.978 100.891 95.038 1.00 32.88 C
ATOM 10 O3' G A1031 31.894 101.261 95.877 1.00 31.08 O
ATOM 11 C2' G A1031 33.274 99.401 95.149 1.00 33.61 C
ATOM 12 O2' G A1031 33.158 98.902 96.462 1.00 35.81 O
ATOM 13 C1' G A1031 32.190 98.816 94.255 1.00 33.83 C
ATOM 14 N9 G A1031 32.513 97.513 93.694 1.00 32.88 N
ATOM 15 C8 G A1031 33.749 96.986 93.400 1.00 34.41 C
ATOM 16 N7 G A1031 33.690 95.751 92.982 1.00 33.81 N
ATOM 17 C5 G A1031 32.334 95.457 92.987 1.00 33.40 C
ATOM 18 C6 G A1031 31.654 94.272 92.658 1.00 32.17 C
ATOM 19 O6 G A1031 32.130 93.188 92.321 1.00 33.62 O
ATOM 20 N1 G A1031 30.272 94.423 92.768 1.00 30.22 N
ATOM 21 C2 G A1031 29.630 95.558 93.159 1.00 29.33 C
ATOM 22 N2 G A1031 28.299 95.512 93.173 1.00 24.43 N
ATOM 23 N3 G A1031 30.253 96.664 93.505 1.00 32.13 N
ATOM 24 C4 G A1031 31.598 96.545 93.394 1.00 33.21 C
ATOM 25 P A A1032 32.093 102.365 97.023 1.00 31.42 P
ATOM 26 OP1 A A1032 33.180 103.317 96.681 1.00 32.45 O
ATOM 27 OP2 A A1032 32.123 101.652 98.318 1.00 28.09 O
ATOM 28 O5' A A1032 30.748 103.200 96.924 1.00 32.44 O
TER
ATOM 1 O3' C B1028 37.699 100.311 95.972 1.00 32.37 O
ATOM 2 P A B1029 37.475 100.714 94.442 1.00 33.46 P
ATOM 3 OP1 A B1029 36.934 102.084 94.400 1.00 33.65 O
ATOM 4 OP2 A B1029 36.711 99.615 93.811 1.00 34.16 O
ATOM 5 O5' A B1029 38.937 100.666 93.798 1.00 31.48 O
ATOM 6 C5' A B1029 39.926 101.699 94.001 1.00 28.86 C
ATOM 7 C4' A B1029 41.170 101.341 93.238 1.00 29.14 C
ATOM 8 O4' A B1029 41.581 100.000 93.595 1.00 31.04 O
ATOM 9 C3' A B1029 40.911 101.273 91.754 1.00 29.40 C
ATOM 10 O3' A B1029 41.096 102.574 91.255 1.00 30.52 O
ATOM 11 C2' A B1029 41.934 100.263 91.262 1.00 29.90 C
ATOM 12 O2' A B1029 43.218 100.816 91.088 1.00 29.07 O
ATOM 13 C1' A B1029 41.952 99.281 92.432 1.00 30.65 C
ATOM 14 N9 A B1029 41.045 98.139 92.295 1.00 31.00 N
ATOM 15 C8 A B1029 39.708 98.027 92.614 1.00 31.58 C
ATOM 16 N7 A B1029 39.227 96.820 92.435 1.00 32.99 N
ATOM 17 C5 A B1029 40.312 96.101 91.949 1.00 32.26 C
ATOM 18 C6 A B1029 40.470 94.759 91.573 1.00 33.45 C
ATOM 19 N6 A B1029 39.496 93.848 91.647 1.00 33.66 N
ATOM 20 N1 A B1029 41.683 94.375 91.118 1.00 32.41 N
ATOM 21 C2 A B1029 42.658 95.277 91.054 1.00 30.21 C
ATOM 22 N3 A B1029 42.637 96.556 91.384 1.00 30.32 N
ATOM 23 C4 A B1029 41.425 96.908 91.835 1.00 30.75 C
ATOM 24 P G B1030 40.440 102.994 89.867 1.00 30.33 P
ATOM 25 OP1 G B1030 41.240 102.382 88.802 1.00 27.99 O
ATOM 26 OP2 G B1030 40.204 104.457 89.880 1.00 29.55 O
ATOM 27 O5' G B1030 39.032 102.281 89.881 1.00 31.78 O
TER
ATOM 2 P G A1031 33.972 102.109 90.143 1.00 32.97 P
ATOM 3 OP1 G A1031 33.277 101.978 88.865 1.00 35.03 O
ATOM 4 OP2 G A1031 34.579 103.421 90.511 1.00 33.95 O
ATOM 5 O5' G A1031 33.036 101.675 91.338 1.00 31.70 O
ATOM 6 C5' G A1031 33.612 101.404 92.622 1.00 33.57 C
ATOM 7 C4' G A1031 32.529 101.028 93.589 1.00 34.40 C
ATOM 8 O4' G A1031 32.007 99.727 93.199 1.00 35.60 O
ATOM 9 C3' G A1031 32.978 100.891 95.038 1.00 32.88 C
ATOM 10 O3' G A1031 31.894 101.261 95.877 1.00 31.08 O
ATOM 11 C2' G A1031 33.274 99.401 95.149 1.00 33.61 C
ATOM 12 O2' G A1031 33.158 98.902 96.462 1.00 35.81 O
ATOM 13 C1' G A1031 32.190 98.816 94.255 1.00 33.83 C
ATOM 14 N9 G A1031 32.513 97.513 93.694 1.00 32.88 N
ATOM 15 C8 G A1031 33.749 96.986 93.400 1.00 34.41 C
ATOM 16 N7 G A1031 33.690 95.751 92.982 1.00 33.81 N
ATOM 17 C5 G A1031 32.334 95.457 92.987 1.00 33.40 C
ATOM 18 C6 G A1031 31.654 94.272 92.658 1.00 32.17 C
ATOM 19 O6 G A1031 32.130 93.188 92.321 1.00 33.62 O
ATOM 20 N1 G A1031 30.272 94.423 92.768 1.00 30.22 N
ATOM 21 C2 G A1031 29.630 95.558 93.159 1.00 29.33 C
ATOM 22 N2 G A1031 28.299 95.512 93.173 1.00 24.43 N
ATOM 23 N3 G A1031 30.253 96.664 93.505 1.00 32.13 N
ATOM 24 C4 G A1031 31.598 96.545 93.394 1.00 33.21 C
ATOM 25 P A A1032 32.093 102.365 97.023 1.00 31.42 P
ATOM 26 OP1 A A1032 33.180 103.317 96.681 1.00 32.45 O
ATOM 27 OP2 A A1032 32.123 101.652 98.318 1.00 28.09 O
ATOM 28 O5' A A1032 30.748 103.200 96.924 1.00 32.44 O
TER
ATOM 1 O3' C B1028 37.699 100.311 95.972 1.00 32.37 O
ATOM 2 P A B1029 37.475 100.714 94.442 1.00 33.46 P
ATOM 3 OP1 A B1029 36.934 102.084 94.400 1.00 33.65 O
ATOM 4 OP2 A B1029 36.711 99.615 93.811 1.00 34.16 O
ATOM 5 O5' A B1029 38.937 100.666 93.798 1.00 31.48 O
ATOM 6 C5' A B1029 39.926 101.699 94.001 1.00 28.86 C
ATOM 7 C4' A B1029 41.170 101.341 93.238 1.00 29.14 C
ATOM 8 O4' A B1029 41.581 100.000 93.595 1.00 31.04 O
ATOM 9 C3' A B1029 40.911 101.273 91.754 1.00 29.40 C
ATOM 10 O3' A B1029 41.096 102.574 91.255 1.00 30.52 O
ATOM 11 C2' A B1029 41.934 100.263 91.262 1.00 29.90 C
ATOM 12 O2' A B1029 43.218 100.816 91.088 1.00 29.07 O
ATOM 13 C1' A B1029 41.952 99.281 92.432 1.00 30.65 C
ATOM 14 N9 A B1029 41.045 98.139 92.295 1.00 31.00 N
ATOM 15 C8 A B1029 39.708 98.027 92.614 1.00 31.58 C
ATOM 16 N7 A B1029 39.227 96.820 92.435 1.00 32.99 N
ATOM 17 C5 A B1029 40.312 96.101 91.949 1.00 32.26 C
ATOM 18 C6 A B1029 40.470 94.759 91.573 1.00 33.45 C
ATOM 19 N6 A B1029 39.496 93.848 91.647 1.00 33.66 N
ATOM 20 N1 A B1029 41.683 94.375 91.118 1.00 32.41 N
ATOM 21 C2 A B1029 42.658 95.277 91.054 1.00 30.21 C
ATOM 22 N3 A B1029 42.637 96.556 91.384 1.00 30.32 N
ATOM 23 C4 A B1029 41.425 96.908 91.835 1.00 30.75 C
ATOM 24 P G B1030 40.440 102.994 89.867 1.00 30.33 P
ATOM 25 OP1 G B1030 41.240 102.382 88.802 1.00 27.99 O
ATOM 26 OP2 G B1030 40.204 104.457 89.880 1.00 29.55 O
ATOM 27 O5' G B1030 39.032 102.281 89.881 1.00 31.78 O
TER
Atoms:
OP1: (33.277,101.978,88.865)
OP2: (34.579,103.421,90.511)
C3': (32.978,100.891,95.038)
C1': (32.190,98.816,94.255)
C5': (33.612,101.404,92.622)
O6: (32.130,93.188,92.321)
O4': (32.007,99.727,93.199)
C8: (33.749,96.986,93.400)
C2: (29.630,95.558,93.159)
C6: (31.654,94.272,92.658)
C5: (32.334,95.457,92.987)
C4: (31.598,96.545,93.394)
P: (33.972,102.109,90.143)
C4': (32.529,101.028,93.589)
C2': (33.274,99.401,95.149)
O2': (33.158,98.902,96.462)
N1: (30.272,94.423,92.768)
N2: (28.299,95.512,93.173)
N3: (30.253,96.664,93.505)
N7: (33.690,95.751,92.982)
N9: (32.513,97.513,93.694)
O5': (33.036,101.675,91.338)
O3': (31.894,101.261,95.877)
OP2: (34.579,103.421,90.511)
C3': (32.978,100.891,95.038)
C1': (32.190,98.816,94.255)
C5': (33.612,101.404,92.622)
O6: (32.130,93.188,92.321)
O4': (32.007,99.727,93.199)
C8: (33.749,96.986,93.400)
C2: (29.630,95.558,93.159)
C6: (31.654,94.272,92.658)
C5: (32.334,95.457,92.987)
C4: (31.598,96.545,93.394)
P: (33.972,102.109,90.143)
C4': (32.529,101.028,93.589)
C2': (33.274,99.401,95.149)
O2': (33.158,98.902,96.462)
N1: (30.272,94.423,92.768)
N2: (28.299,95.512,93.173)
N3: (30.253,96.664,93.505)
N7: (33.690,95.751,92.982)
N9: (32.513,97.513,93.694)
O5': (33.036,101.675,91.338)
O3': (31.894,101.261,95.877)
OP1: (36.934,102.084,94.400)
OP2: (36.711,99.615,93.811)
C3': (40.911,101.273,91.754)
C1': (41.952,99.281,92.432)
C5': (39.926,101.699,94.001)
O4': (41.581,100.000,93.595)
C8: (39.708,98.027,92.614)
O2': (43.218,100.816,91.088)
C6: (40.470,94.759,91.573)
C5: (40.312,96.101,91.949)
C4: (41.425,96.908,91.835)
P: (37.475,100.714,94.442)
C4': (41.170,101.341,93.238)
C2': (41.934,100.263,91.262)
C2: (42.658,95.277,91.054)
N1: (41.683,94.375,91.118)
N3: (42.637,96.556,91.384)
N6: (39.496,93.848,91.647)
N7: (39.227,96.820,92.435)
N9: (41.045,98.139,92.295)
O5': (38.937,100.666,93.798)
O3': (41.096,102.574,91.255)
OP2: (36.711,99.615,93.811)
C3': (40.911,101.273,91.754)
C1': (41.952,99.281,92.432)
C5': (39.926,101.699,94.001)
O4': (41.581,100.000,93.595)
C8: (39.708,98.027,92.614)
O2': (43.218,100.816,91.088)
C6: (40.470,94.759,91.573)
C5: (40.312,96.101,91.949)
C4: (41.425,96.908,91.835)
P: (37.475,100.714,94.442)
C4': (41.170,101.341,93.238)
C2': (41.934,100.263,91.262)
C2: (42.658,95.277,91.054)
N1: (41.683,94.375,91.118)
N3: (42.637,96.556,91.384)
N6: (39.496,93.848,91.647)
N7: (39.227,96.820,92.435)
N9: (41.045,98.139,92.295)
O5': (38.937,100.666,93.798)
O3': (41.096,102.574,91.255)
Image (generated by PyMOL):