Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2129:A2373
Extra
PDB:
ATOM 1 O3' U A2128 69.729 94.869 95.964 1.00 45.96 O
ATOM 2 P G A2129 69.047 94.298 97.286 1.00 47.85 P
ATOM 3 OP1 G A2129 70.040 94.257 98.379 1.00 47.92 O
ATOM 4 OP2 G A2129 68.352 93.071 96.872 1.00 49.28 O
ATOM 5 O5' G A2129 68.008 95.409 97.698 1.00 44.47 O
ATOM 6 C5' G A2129 68.472 96.532 98.419 1.00 42.90 C
ATOM 7 C4' G A2129 67.383 97.548 98.534 1.00 42.18 C
ATOM 8 O4' G A2129 66.185 96.925 99.073 1.00 41.53 O
ATOM 9 C3' G A2129 67.746 98.664 99.490 1.00 39.55 C
ATOM 10 O3' G A2129 67.169 99.887 99.087 1.00 37.32 O
ATOM 11 C2' G A2129 67.140 98.184 100.792 1.00 39.01 C
ATOM 12 O2' G A2129 66.905 99.269 101.643 1.00 40.34 O
ATOM 13 C1' G A2129 65.851 97.534 100.295 1.00 39.70 C
ATOM 14 N9 G A2129 65.255 96.531 101.181 1.00 39.67 N
ATOM 15 C8 G A2129 64.279 96.790 102.100 1.00 39.02 C
ATOM 16 N7 G A2129 63.939 95.749 102.806 1.00 39.29 N
ATOM 17 C5 G A2129 64.735 94.728 102.326 1.00 38.54 C
ATOM 18 C6 G A2129 64.820 93.383 102.732 1.00 38.48 C
ATOM 19 O6 G A2129 64.211 92.819 103.651 1.00 39.37 O
ATOM 20 N1 G A2129 65.740 92.671 101.960 1.00 37.73 N
ATOM 21 C2 G A2129 66.496 93.198 100.942 1.00 37.43 C
ATOM 22 N2 G A2129 67.329 92.350 100.315 1.00 36.93 N
ATOM 23 N3 G A2129 66.439 94.465 100.567 1.00 38.54 N
ATOM 24 C4 G A2129 65.541 95.174 101.298 1.00 38.89 C
ATOM 25 P G A2130 68.091 101.199 98.951 1.00 35.03 P
ATOM 26 OP1 G A2130 69.420 100.891 99.515 1.00 35.85 O
ATOM 27 OP2 G A2130 67.330 102.352 99.473 1.00 34.42 O
ATOM 28 O5' G A2130 68.285 101.360 97.382 1.00 34.45 O
TER
ATOM 1 O3' U B2372 62.322 99.776 103.125 1.00 37.66 O
ATOM 2 P A B2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 3 OP1 A B2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 4 OP2 A B2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 5 O5' A B2373 61.481 101.273 101.292 1.00 37.89 O
ATOM 6 C5' A B2373 60.119 101.214 101.690 1.00 35.88 C
ATOM 7 C4' A B2373 59.542 102.585 101.543 1.00 35.88 C
ATOM 8 O4' A B2373 60.473 103.489 102.203 1.00 37.51 O
ATOM 9 C3' A B2373 59.497 103.059 100.100 1.00 35.05 C
ATOM 10 O3' A B2373 58.449 104.020 100.024 1.00 33.64 O
ATOM 11 C2' A B2373 60.892 103.656 99.907 1.00 35.91 C
ATOM 12 O2' A B2373 61.052 104.571 98.845 1.00 35.69 O
ATOM 13 C1' A B2373 61.108 104.332 101.253 1.00 37.46 C
ATOM 14 N9 A B2373 62.520 104.484 101.628 1.00 38.37 N
ATOM 15 C8 A B2373 63.556 103.615 101.373 1.00 39.18 C
ATOM 16 N7 A B2373 64.708 104.004 101.863 1.00 39.62 N
ATOM 17 C5 A B2373 64.420 105.214 102.475 1.00 38.31 C
ATOM 18 C6 A B2373 65.221 106.126 103.176 1.00 37.55 C
ATOM 19 N6 A B2373 66.519 105.931 103.415 1.00 38.25 N
ATOM 20 N1 A B2373 64.634 107.254 103.638 1.00 36.97 N
ATOM 21 C2 A B2373 63.323 107.436 103.415 1.00 37.89 C
ATOM 22 N3 A B2373 62.461 106.644 102.782 1.00 37.59 N
ATOM 23 C4 A B2373 63.078 105.534 102.328 1.00 38.55 C
ATOM 24 P C B2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 25 OP1 C B2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 26 OP2 C B2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 27 O5' C B2374 55.964 103.782 99.471 1.00 31.50 O
TER
ATOM 2 P G A2129 69.047 94.298 97.286 1.00 47.85 P
ATOM 3 OP1 G A2129 70.040 94.257 98.379 1.00 47.92 O
ATOM 4 OP2 G A2129 68.352 93.071 96.872 1.00 49.28 O
ATOM 5 O5' G A2129 68.008 95.409 97.698 1.00 44.47 O
ATOM 6 C5' G A2129 68.472 96.532 98.419 1.00 42.90 C
ATOM 7 C4' G A2129 67.383 97.548 98.534 1.00 42.18 C
ATOM 8 O4' G A2129 66.185 96.925 99.073 1.00 41.53 O
ATOM 9 C3' G A2129 67.746 98.664 99.490 1.00 39.55 C
ATOM 10 O3' G A2129 67.169 99.887 99.087 1.00 37.32 O
ATOM 11 C2' G A2129 67.140 98.184 100.792 1.00 39.01 C
ATOM 12 O2' G A2129 66.905 99.269 101.643 1.00 40.34 O
ATOM 13 C1' G A2129 65.851 97.534 100.295 1.00 39.70 C
ATOM 14 N9 G A2129 65.255 96.531 101.181 1.00 39.67 N
ATOM 15 C8 G A2129 64.279 96.790 102.100 1.00 39.02 C
ATOM 16 N7 G A2129 63.939 95.749 102.806 1.00 39.29 N
ATOM 17 C5 G A2129 64.735 94.728 102.326 1.00 38.54 C
ATOM 18 C6 G A2129 64.820 93.383 102.732 1.00 38.48 C
ATOM 19 O6 G A2129 64.211 92.819 103.651 1.00 39.37 O
ATOM 20 N1 G A2129 65.740 92.671 101.960 1.00 37.73 N
ATOM 21 C2 G A2129 66.496 93.198 100.942 1.00 37.43 C
ATOM 22 N2 G A2129 67.329 92.350 100.315 1.00 36.93 N
ATOM 23 N3 G A2129 66.439 94.465 100.567 1.00 38.54 N
ATOM 24 C4 G A2129 65.541 95.174 101.298 1.00 38.89 C
ATOM 25 P G A2130 68.091 101.199 98.951 1.00 35.03 P
ATOM 26 OP1 G A2130 69.420 100.891 99.515 1.00 35.85 O
ATOM 27 OP2 G A2130 67.330 102.352 99.473 1.00 34.42 O
ATOM 28 O5' G A2130 68.285 101.360 97.382 1.00 34.45 O
TER
ATOM 1 O3' U B2372 62.322 99.776 103.125 1.00 37.66 O
ATOM 2 P A B2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 3 OP1 A B2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 4 OP2 A B2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 5 O5' A B2373 61.481 101.273 101.292 1.00 37.89 O
ATOM 6 C5' A B2373 60.119 101.214 101.690 1.00 35.88 C
ATOM 7 C4' A B2373 59.542 102.585 101.543 1.00 35.88 C
ATOM 8 O4' A B2373 60.473 103.489 102.203 1.00 37.51 O
ATOM 9 C3' A B2373 59.497 103.059 100.100 1.00 35.05 C
ATOM 10 O3' A B2373 58.449 104.020 100.024 1.00 33.64 O
ATOM 11 C2' A B2373 60.892 103.656 99.907 1.00 35.91 C
ATOM 12 O2' A B2373 61.052 104.571 98.845 1.00 35.69 O
ATOM 13 C1' A B2373 61.108 104.332 101.253 1.00 37.46 C
ATOM 14 N9 A B2373 62.520 104.484 101.628 1.00 38.37 N
ATOM 15 C8 A B2373 63.556 103.615 101.373 1.00 39.18 C
ATOM 16 N7 A B2373 64.708 104.004 101.863 1.00 39.62 N
ATOM 17 C5 A B2373 64.420 105.214 102.475 1.00 38.31 C
ATOM 18 C6 A B2373 65.221 106.126 103.176 1.00 37.55 C
ATOM 19 N6 A B2373 66.519 105.931 103.415 1.00 38.25 N
ATOM 20 N1 A B2373 64.634 107.254 103.638 1.00 36.97 N
ATOM 21 C2 A B2373 63.323 107.436 103.415 1.00 37.89 C
ATOM 22 N3 A B2373 62.461 106.644 102.782 1.00 37.59 N
ATOM 23 C4 A B2373 63.078 105.534 102.328 1.00 38.55 C
ATOM 24 P C B2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 25 OP1 C B2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 26 OP2 C B2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 27 O5' C B2374 55.964 103.782 99.471 1.00 31.50 O
TER
Atoms:
OP1: (70.040,94.257,98.379)
OP2: (68.352,93.071,96.872)
C3': (67.746,98.664,99.490)
C1': (65.851,97.534,100.295)
C5': (68.472,96.532,98.419)
O6: (64.211,92.819,103.651)
O4': (66.185,96.925,99.073)
C8: (64.279,96.790,102.100)
C2: (66.496,93.198,100.942)
C6: (64.820,93.383,102.732)
C5: (64.735,94.728,102.326)
C4: (65.541,95.174,101.298)
P: (69.047,94.298,97.286)
C4': (67.383,97.548,98.534)
C2': (67.140,98.184,100.792)
O2': (66.905,99.269,101.643)
N1: (65.740,92.671,101.960)
N2: (67.329,92.350,100.315)
N3: (66.439,94.465,100.567)
N7: (63.939,95.749,102.806)
N9: (65.255,96.531,101.181)
O5': (68.008,95.409,97.698)
O3': (67.169,99.887,99.087)
OP2: (68.352,93.071,96.872)
C3': (67.746,98.664,99.490)
C1': (65.851,97.534,100.295)
C5': (68.472,96.532,98.419)
O6: (64.211,92.819,103.651)
O4': (66.185,96.925,99.073)
C8: (64.279,96.790,102.100)
C2: (66.496,93.198,100.942)
C6: (64.820,93.383,102.732)
C5: (64.735,94.728,102.326)
C4: (65.541,95.174,101.298)
P: (69.047,94.298,97.286)
C4': (67.383,97.548,98.534)
C2': (67.140,98.184,100.792)
O2': (66.905,99.269,101.643)
N1: (65.740,92.671,101.960)
N2: (67.329,92.350,100.315)
N3: (66.439,94.465,100.567)
N7: (63.939,95.749,102.806)
N9: (65.255,96.531,101.181)
O5': (68.008,95.409,97.698)
O3': (67.169,99.887,99.087)
OP1: (62.130,98.925,100.815)
OP2: (63.881,100.685,101.440)
C3': (59.497,103.059,100.100)
C1': (61.108,104.332,101.253)
C5': (60.119,101.214,101.690)
O4': (60.473,103.489,102.203)
C8: (63.556,103.615,101.373)
O2': (61.052,104.571,98.845)
C6: (65.221,106.126,103.176)
C5: (64.420,105.214,102.475)
C4: (63.078,105.534,102.328)
P: (62.520,100.111,101.589)
C4': (59.542,102.585,101.543)
C2': (60.892,103.656,99.907)
C2: (63.323,107.436,103.415)
N1: (64.634,107.254,103.638)
N3: (62.461,106.644,102.782)
N6: (66.519,105.931,103.415)
N7: (64.708,104.004,101.863)
N9: (62.520,104.484,101.628)
O5': (61.481,101.273,101.292)
O3': (58.449,104.020,100.024)
OP2: (63.881,100.685,101.440)
C3': (59.497,103.059,100.100)
C1': (61.108,104.332,101.253)
C5': (60.119,101.214,101.690)
O4': (60.473,103.489,102.203)
C8: (63.556,103.615,101.373)
O2': (61.052,104.571,98.845)
C6: (65.221,106.126,103.176)
C5: (64.420,105.214,102.475)
C4: (63.078,105.534,102.328)
P: (62.520,100.111,101.589)
C4': (59.542,102.585,101.543)
C2': (60.892,103.656,99.907)
C2: (63.323,107.436,103.415)
N1: (64.634,107.254,103.638)
N3: (62.461,106.644,102.782)
N6: (66.519,105.931,103.415)
N7: (64.708,104.004,101.863)
N9: (62.520,104.484,101.628)
O5': (61.481,101.273,101.292)
O3': (58.449,104.020,100.024)
Image (generated by PyMOL):