Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01386:01399
Extra
PDB:
ATOM 1 O3' C A1385 43.891 169.002 71.457 1.00 67.08 O
ATOM 2 P A A1386 42.438 168.344 71.582 1.00 68.59 P
ATOM 3 OP1 A A1386 41.550 168.932 70.541 1.00 66.92 O
ATOM 4 OP2 A A1386 42.070 168.449 73.023 1.00 66.89 O
ATOM 5 O5' A A1386 42.722 166.832 71.185 1.00 65.81 O
ATOM 6 C5' A A1386 41.707 165.831 71.250 1.00 63.77 C
ATOM 7 C4' A A1386 42.164 164.617 70.490 1.00 62.81 C
ATOM 8 O4' A A1386 42.298 164.971 69.089 1.00 63.07 O
ATOM 9 C3' A A1386 43.550 164.133 70.867 1.00 60.97 C
ATOM 10 O3' A A1386 43.540 163.328 72.027 1.00 59.02 O
ATOM 11 C2' A A1386 43.983 163.400 69.612 1.00 61.11 C
ATOM 12 O2' A A1386 43.369 162.140 69.474 1.00 61.18 O
ATOM 13 C1' A A1386 43.437 164.336 68.537 1.00 62.90 C
ATOM 14 N9 A A1386 44.402 165.376 68.192 1.00 65.74 N
ATOM 15 C8 A A1386 44.327 166.726 68.458 1.00 66.86 C
ATOM 16 N7 A A1386 45.384 167.401 68.072 1.00 68.87 N
ATOM 17 C5 A A1386 46.209 166.433 67.505 1.00 69.61 C
ATOM 18 C6 A A1386 47.498 166.498 66.926 1.00 69.91 C
ATOM 19 N6 A A1386 48.215 167.624 66.837 1.00 69.95 N
ATOM 20 N1 A A1386 48.031 165.349 66.445 1.00 69.20 N
ATOM 21 C2 A A1386 47.320 164.217 66.554 1.00 68.24 C
ATOM 22 N3 A A1386 46.112 164.026 67.088 1.00 68.00 N
ATOM 23 C4 A A1386 45.606 165.185 67.553 1.00 68.09 C
ATOM 24 P C A1387 44.841 163.286 72.960 1.00 58.64 P
ATOM 25 OP1 C A1387 44.575 162.304 74.033 1.00 58.94 O
ATOM 26 OP2 C A1387 45.226 164.673 73.321 1.00 59.34 O
ATOM 27 O5' C A1387 45.967 162.702 72.000 1.00 54.82 O
TER
ATOM 1 O3' C B1398 54.962 164.764 66.265 1.00 50.13 O
ATOM 2 P U B1399 54.793 165.004 64.690 1.00 52.75 P
ATOM 3 OP1 U B1399 54.725 163.663 64.069 1.00 52.69 O
ATOM 4 OP2 U B1399 55.826 165.968 64.236 1.00 50.61 O
ATOM 5 O5' U B1399 53.364 165.694 64.578 1.00 52.51 O
ATOM 6 C5' U B1399 52.162 164.929 64.780 1.00 56.95 C
ATOM 7 C4' U B1399 50.956 165.719 64.329 1.00 59.69 C
ATOM 8 O4' U B1399 50.713 166.811 65.251 1.00 59.35 O
ATOM 9 C3' U B1399 51.083 166.394 62.974 1.00 61.54 C
ATOM 10 O3' U B1399 50.800 165.501 61.902 1.00 65.28 O
ATOM 11 C2' U B1399 50.068 167.521 63.081 1.00 60.65 C
ATOM 12 O2' U B1399 48.740 167.059 62.909 1.00 61.18 O
ATOM 13 C1' U B1399 50.266 167.952 64.534 1.00 59.02 C
ATOM 14 N1 U B1399 51.259 169.024 64.717 1.00 57.98 N
ATOM 15 C2 U B1399 50.818 170.336 64.681 1.00 56.95 C
ATOM 16 O2 U B1399 49.656 170.645 64.473 1.00 56.63 O
ATOM 17 N3 U B1399 51.793 171.275 64.898 1.00 55.95 N
ATOM 18 C4 U B1399 53.131 171.047 65.135 1.00 55.75 C
ATOM 19 O4 U B1399 53.879 171.999 65.329 1.00 56.76 O
ATOM 20 C5 U B1399 53.511 169.675 65.141 1.00 56.18 C
ATOM 21 C6 U B1399 52.590 168.734 64.936 1.00 57.78 C
ATOM 22 P G B1400 51.486 165.739 60.471 1.00 66.37 P
ATOM 23 OP1 G B1400 50.935 164.697 59.567 1.00 67.31 O
ATOM 24 OP2 G B1400 52.952 165.843 60.663 1.00 67.57 O
ATOM 25 O5' G B1400 50.931 167.157 60.011 1.00 65.36 O
TER
ATOM 2 P A A1386 42.438 168.344 71.582 1.00 68.59 P
ATOM 3 OP1 A A1386 41.550 168.932 70.541 1.00 66.92 O
ATOM 4 OP2 A A1386 42.070 168.449 73.023 1.00 66.89 O
ATOM 5 O5' A A1386 42.722 166.832 71.185 1.00 65.81 O
ATOM 6 C5' A A1386 41.707 165.831 71.250 1.00 63.77 C
ATOM 7 C4' A A1386 42.164 164.617 70.490 1.00 62.81 C
ATOM 8 O4' A A1386 42.298 164.971 69.089 1.00 63.07 O
ATOM 9 C3' A A1386 43.550 164.133 70.867 1.00 60.97 C
ATOM 10 O3' A A1386 43.540 163.328 72.027 1.00 59.02 O
ATOM 11 C2' A A1386 43.983 163.400 69.612 1.00 61.11 C
ATOM 12 O2' A A1386 43.369 162.140 69.474 1.00 61.18 O
ATOM 13 C1' A A1386 43.437 164.336 68.537 1.00 62.90 C
ATOM 14 N9 A A1386 44.402 165.376 68.192 1.00 65.74 N
ATOM 15 C8 A A1386 44.327 166.726 68.458 1.00 66.86 C
ATOM 16 N7 A A1386 45.384 167.401 68.072 1.00 68.87 N
ATOM 17 C5 A A1386 46.209 166.433 67.505 1.00 69.61 C
ATOM 18 C6 A A1386 47.498 166.498 66.926 1.00 69.91 C
ATOM 19 N6 A A1386 48.215 167.624 66.837 1.00 69.95 N
ATOM 20 N1 A A1386 48.031 165.349 66.445 1.00 69.20 N
ATOM 21 C2 A A1386 47.320 164.217 66.554 1.00 68.24 C
ATOM 22 N3 A A1386 46.112 164.026 67.088 1.00 68.00 N
ATOM 23 C4 A A1386 45.606 165.185 67.553 1.00 68.09 C
ATOM 24 P C A1387 44.841 163.286 72.960 1.00 58.64 P
ATOM 25 OP1 C A1387 44.575 162.304 74.033 1.00 58.94 O
ATOM 26 OP2 C A1387 45.226 164.673 73.321 1.00 59.34 O
ATOM 27 O5' C A1387 45.967 162.702 72.000 1.00 54.82 O
TER
ATOM 1 O3' C B1398 54.962 164.764 66.265 1.00 50.13 O
ATOM 2 P U B1399 54.793 165.004 64.690 1.00 52.75 P
ATOM 3 OP1 U B1399 54.725 163.663 64.069 1.00 52.69 O
ATOM 4 OP2 U B1399 55.826 165.968 64.236 1.00 50.61 O
ATOM 5 O5' U B1399 53.364 165.694 64.578 1.00 52.51 O
ATOM 6 C5' U B1399 52.162 164.929 64.780 1.00 56.95 C
ATOM 7 C4' U B1399 50.956 165.719 64.329 1.00 59.69 C
ATOM 8 O4' U B1399 50.713 166.811 65.251 1.00 59.35 O
ATOM 9 C3' U B1399 51.083 166.394 62.974 1.00 61.54 C
ATOM 10 O3' U B1399 50.800 165.501 61.902 1.00 65.28 O
ATOM 11 C2' U B1399 50.068 167.521 63.081 1.00 60.65 C
ATOM 12 O2' U B1399 48.740 167.059 62.909 1.00 61.18 O
ATOM 13 C1' U B1399 50.266 167.952 64.534 1.00 59.02 C
ATOM 14 N1 U B1399 51.259 169.024 64.717 1.00 57.98 N
ATOM 15 C2 U B1399 50.818 170.336 64.681 1.00 56.95 C
ATOM 16 O2 U B1399 49.656 170.645 64.473 1.00 56.63 O
ATOM 17 N3 U B1399 51.793 171.275 64.898 1.00 55.95 N
ATOM 18 C4 U B1399 53.131 171.047 65.135 1.00 55.75 C
ATOM 19 O4 U B1399 53.879 171.999 65.329 1.00 56.76 O
ATOM 20 C5 U B1399 53.511 169.675 65.141 1.00 56.18 C
ATOM 21 C6 U B1399 52.590 168.734 64.936 1.00 57.78 C
ATOM 22 P G B1400 51.486 165.739 60.471 1.00 66.37 P
ATOM 23 OP1 G B1400 50.935 164.697 59.567 1.00 67.31 O
ATOM 24 OP2 G B1400 52.952 165.843 60.663 1.00 67.57 O
ATOM 25 O5' G B1400 50.931 167.157 60.011 1.00 65.36 O
TER
Atoms:
OP1: (41.550,168.932,70.541)
OP2: (42.070,168.449,73.023)
C3': (43.550,164.133,70.867)
C1': (43.437,164.336,68.537)
C5': (41.707,165.831,71.250)
O4': (42.298,164.971,69.089)
C8: (44.327,166.726,68.458)
O2': (43.369,162.140,69.474)
C6: (47.498,166.498,66.926)
C5: (46.209,166.433,67.505)
C4: (45.606,165.185,67.553)
P: (42.438,168.344,71.582)
C4': (42.164,164.617,70.490)
C2': (43.983,163.400,69.612)
C2: (47.320,164.217,66.554)
N1: (48.031,165.349,66.445)
N3: (46.112,164.026,67.088)
N6: (48.215,167.624,66.837)
N7: (45.384,167.401,68.072)
N9: (44.402,165.376,68.192)
O5': (42.722,166.832,71.185)
O3': (43.540,163.328,72.027)
OP2: (42.070,168.449,73.023)
C3': (43.550,164.133,70.867)
C1': (43.437,164.336,68.537)
C5': (41.707,165.831,71.250)
O4': (42.298,164.971,69.089)
C8: (44.327,166.726,68.458)
O2': (43.369,162.140,69.474)
C6: (47.498,166.498,66.926)
C5: (46.209,166.433,67.505)
C4: (45.606,165.185,67.553)
P: (42.438,168.344,71.582)
C4': (42.164,164.617,70.490)
C2': (43.983,163.400,69.612)
C2: (47.320,164.217,66.554)
N1: (48.031,165.349,66.445)
N3: (46.112,164.026,67.088)
N6: (48.215,167.624,66.837)
N7: (45.384,167.401,68.072)
N9: (44.402,165.376,68.192)
O5': (42.722,166.832,71.185)
O3': (43.540,163.328,72.027)
C4: (53.131,171.047,65.135)
N3: (51.793,171.275,64.898)
OP1: (54.725,163.663,64.069)
OP2: (55.826,165.968,64.236)
C2: (50.818,170.336,64.681)
C1': (50.266,167.952,64.534)
C3': (51.083,166.394,62.974)
O5': (53.364,165.694,64.578)
O4': (50.713,166.811,65.251)
C5': (52.162,164.929,64.780)
P: (54.793,165.004,64.690)
C4': (50.956,165.719,64.329)
C2': (50.068,167.521,63.081)
O2': (48.740,167.059,62.909)
N1: (51.259,169.024,64.717)
O4: (53.879,171.999,65.329)
O2: (49.656,170.645,64.473)
C6: (52.590,168.734,64.936)
C5: (53.511,169.675,65.141)
O3': (50.800,165.501,61.902)
N3: (51.793,171.275,64.898)
OP1: (54.725,163.663,64.069)
OP2: (55.826,165.968,64.236)
C2: (50.818,170.336,64.681)
C1': (50.266,167.952,64.534)
C3': (51.083,166.394,62.974)
O5': (53.364,165.694,64.578)
O4': (50.713,166.811,65.251)
C5': (52.162,164.929,64.780)
P: (54.793,165.004,64.690)
C4': (50.956,165.719,64.329)
C2': (50.068,167.521,63.081)
O2': (48.740,167.059,62.909)
N1: (51.259,169.024,64.717)
O4: (53.879,171.999,65.329)
O2: (49.656,170.645,64.473)
C6: (52.590,168.734,64.936)
C5: (53.511,169.675,65.141)
O3': (50.800,165.501,61.902)
Image (generated by PyMOL):